RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 RAD50Q92878 1312 aa15.12■□□□□ 0.01
ZNF558-205ENST00000597304 XRN1Q8IZH2 1706 aaKnown RBP15.11■□□□□ 0.01
ZNF558-205ENST00000597304 FAM177BA6PVY3 158 aa15.11■□□□□ 0.01
ZNF558-205ENST00000597304 SYT1P21579 422 aa15.11■□□□□ 0.01
ZNF558-205ENST00000597304 KIAA1524Q8TCG1 905 aa15.11■□□□□ 0.01
ZNF558-205ENST00000597304 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
ZNF558-205ENST00000597304 RTF1Q92541 710 aaKnown RBP15.11■□□□□ 0.01
ZNF558-205ENST00000597304 TTC14Q96N46 770 aa15.11■□□□□ 0.01
ZNF558-205ENST00000597304 SMC3Q9UQE7 1217 aa15.11■□□□□ 0.01
ZNF558-205ENST00000597304 FAM208AQ9UK61 1670 aaKnown RBP15.1■□□□□ 0.01
ZNF558-205ENST00000597304 AK2P54819 239 aa15.1■□□□□ 0.01
ZNF558-205ENST00000597304 LIMCH1Q9UPQ0 1083 aa15.1■□□□□ 0.01
ZNF558-205ENST00000597304 GOLGA6L6A8MZA4 724 aa15.1■□□□□ 0.01
ZNF558-205ENST00000597304 FLIIQ13045 1269 aa15.1■□□□□ 0.01
ZNF558-205ENST00000597304 PDCL2Q8N4E4 241 aa15.1■□□□□ 0.01
ZNF558-205ENST00000597304 GTPBP4Q9BZE4 634 aaKnown RBP15.1■□□□□ 0.01
ZNF558-205ENST00000597304 SNX14Q9Y5W7 946 aa15.1■□□□□ 0.01
ZNF558-205ENST00000597304 KCNF1Q9H3M0 494 aa15.09■□□□□ 0.01
ZNF558-205ENST00000597304 LRRFIP2Q9Y608 721 aaKnown RBP15.09■□□□□ 0.01
ZNF558-205ENST00000597304 N4BP2Q86UW6 1770 aaPredicted RBP15.09■□□□□ 0.01
ZNF558-205ENST00000597304 ATP2B3Q16720 1220 aa15.09■□□□□ 0.01
ZNF558-205ENST00000597304 IL1RAPL2Q9NP60 686 aa15.09■□□□□ 0.01
ZNF558-205ENST00000597304 PYCARDQ9ULZ3 195 aa15.09■□□□□ 0.01
ZNF558-205ENST00000597304 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
ZNF558-205ENST00000597304 A2ML1A8K2U0 1454 aa15.09■□□□□ 0.01
ZNF558-205ENST00000597304 SPATA31D1Q6ZQQ2 1576 aa15.08■□□□□ 0.01
ZNF558-205ENST00000597304 SOS1Q07889 1333 aaPredicted RBP15.08■□□□□ 0.01
ZNF558-205ENST00000597304 SGSM2O43147 1006 aa15.08■□□□□ 0
ZNF558-205ENST00000597304 RUFY3Q7L099 469 aa15.08■□□□□ 0
ZNF558-205ENST00000597304 RIOK3O14730 519 aaKnown RBP15.08■□□□□ 0
ZNF558-205ENST00000597304 AP5Z1O43299 807 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 HSP90AB2PQ58FF8 381 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 NUTM1Q86Y26 1132 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 RIMS1Q86UR5 1692 aaKnown RBP15.07■□□□□ 0
ZNF558-205ENST00000597304 TTC21BQ7Z4L5 1316 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 FOXO3O43524 673 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 MAP4K4O95819 1239 aaPredicted RBP15.07■□□□□ 0
ZNF558-205ENST00000597304 CCDC192P0DO97 292 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 CCDC30Q5VVM6 783 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 TXNDC2Q86VQ3 553 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 SPC24Q8NBT2 197 aa15.07■□□□□ 0
ZNF558-205ENST00000597304 LARP6Q9BRS8 491 aaKnown RBP15.07■□□□□ 0
ZNF558-205ENST00000597304 OVOS2A0A0J9YW53 1432 aa15.06■□□□□ 0
ZNF558-205ENST00000597304 OVOS2Q6IE36 1432 aa15.06■□□□□ 0
ZNF558-205ENST00000597304 DNM1Q05193 864 aaKnown RBP15.06■□□□□ 0
ZNF558-205ENST00000597304 LSG1Q9H089 658 aaKnown RBP15.06■□□□□ 0
ZNF558-205ENST00000597304 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
ZNF558-205ENST00000597304 MTHFSDQ2M296 383 aaKnown RBP15.06■□□□□ 0
ZNF558-205ENST00000597304 ANKRD7Q92527 254 aa15.06■□□□□ 0
ZNF558-205ENST00000597304 CACNA1FO60840 1977 aa15.05■□□□□ 0
ZNF558-205ENST00000597304 NALCNQ8IZF0 1738 aa15.05■□□□□ 0
ZNF558-205ENST00000597304 RAB11FIP3O75154 756 aa15.05■□□□□ 0
ZNF558-205ENST00000597304 UBTFL1P0CB47 393 aaPredicted RBP15.05■□□□□ 0
ZNF558-205ENST00000597304 GJB2P29033 226 aa15.05■□□□□ 0
ZNF558-205ENST00000597304 RASEFQ8IZ41 740 aa15.05■□□□□ 0
ZNF558-205ENST00000597304 CNTROBQ8N137 903 aa15.05■□□□□ 0
ZNF558-205ENST00000597304 PXDNLA1KZ92 1463 aa15.05■□□□□ 0
ZNF558-205ENST00000597304 MAP3K19Q56UN5 1328 aa15.05■□□□□ -0
ZNF558-205ENST00000597304 PI4K2BQ8TCG2 481 aa15.05■□□□□ -0
ZNF558-205ENST00000597304 METP08581 1390 aa15.04■□□□□ -0
ZNF558-205ENST00000597304 KIF20AO95235 890 aa15.04■□□□□ -0
ZNF558-205ENST00000597304 CASTP20810 708 aaKnown RBP15.04■□□□□ -0
ZNF558-205ENST00000597304 SSH3Q8TE77 659 aa15.04■□□□□ -0
ZNF558-205ENST00000597304 MTMR6Q9Y217 621 aa15.04■□□□□ -0
ZNF558-205ENST00000597304 FMN2Q9NZ56 1722 aa15.04■□□□□ -0
ZNF558-205ENST00000597304 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
ZNF558-205ENST00000597304 CTIFO43310 598 aaKnown RBP15.04■□□□□ -0
ZNF558-205ENST00000597304 CCDC83Q8IWF9 413 aa15.04■□□□□ -0
ZNF558-205ENST00000597304 SPDYE4A6NLX3 237 aa15.03■□□□□ -0
ZNF558-205ENST00000597304 LARGE1O95461 756 aa15.03■□□□□ -0
ZNF558-205ENST00000597304 FAM200AQ8TCP9 573 aa15.03■□□□□ -0
ZNF558-205ENST00000597304 NECTIN2Q92692 538 aa15.03■□□□□ -0
ZNF558-205ENST00000597304 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
ZNF558-205ENST00000597304 USP44Q9H0E7 712 aa15.03■□□□□ -0
ZNF558-205ENST00000597304 HYPKQ9NX55 129 aa15.03■□□□□ -0
ZNF558-205ENST00000597304 RHPN1Q8TCX5 695 aa15.02■□□□□ -0
ZNF558-205ENST00000597304 LRRC37A3O60309 1634 aa15.02□□□□□ -0.01
ZNF558-205ENST00000597304 VPS37CA5D8V6 355 aaPredicted RBP15.02□□□□□ -0.01
ZNF558-205ENST00000597304 CPA1P15085 419 aa15.02□□□□□ -0.01
ZNF558-205ENST00000597304 U2AF2P26368 475 aaKnown RBP eCLIP15.02□□□□□ -0.01
ZNF558-205ENST00000597304 CWC27Q6UX04 472 aaKnown RBP15.02□□□□□ -0.01
ZNF558-205ENST00000597304 ZSCAN31Q96LW9 406 aaPredicted RBP15.02□□□□□ -0.01
ZNF558-205ENST00000597304 SH2B1Q9NRF2 756 aaPredicted RBP15.02□□□□□ -0.01
ZNF558-205ENST00000597304 CRYBG1Q9Y4K1 1723 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 PTGS1P23219 599 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 MAP3K11Q16584 847 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 KIF1BPQ96EK5 621 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 SPG7Q9UQ90 795 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 VPS53Q5VIR6 699 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 PDRG1Q9NUG6 133 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 TECPR2O15040 1411 aa15.01□□□□□ -0.01
ZNF558-205ENST00000597304 SOX12O15370 315 aa15□□□□□ -0.01
ZNF558-205ENST00000597304 NUP62CLQ9H1M0 184 aa15□□□□□ -0.01
ZNF558-205ENST00000597304 POLA2Q14181 598 aa15□□□□□ -0.01
ZNF558-205ENST00000597304 SIRT1Q96EB6 747 aa15□□□□□ -0.01
ZNF558-205ENST00000597304 JAKMIP1Q96N16 626 aaKnown RBP15□□□□□ -0.01
ZNF558-205ENST00000597304 FEZ1Q99689 392 aa15□□□□□ -0.01
ZNF558-205ENST00000597304 PODXL2Q9NZ53 605 aa15□□□□□ -0.01
ZNF558-205ENST00000597304 USP31Q70CQ4 1352 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms