RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 POLRMTO00411 1230 aaKnown RBP22.81■■□□□ 1.24
CCDC9-202ENST00000595659 KCNA3P22001 575 aa22.81■■□□□ 1.24
CCDC9-202ENST00000595659 ZNF790Q6PG37 636 aa22.81■■□□□ 1.24
CCDC9-202ENST00000595659 ARHGAP27Q6ZUM4 889 aa22.81■■□□□ 1.24
CCDC9-202ENST00000595659 C4AP0C0L4 1744 aa22.8■■□□□ 1.24
CCDC9-202ENST00000595659 KCNQ3O43525 872 aa22.8■■□□□ 1.24
CCDC9-202ENST00000595659 STARD3NLO95772 234 aa22.8■■□□□ 1.24
CCDC9-202ENST00000595659 GPBP1L1Q9HC44 474 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-202ENST00000595659 NARFQ9UHQ1 456 aa22.8■■□□□ 1.24
CCDC9-202ENST00000595659 COL15A1P39059 1388 aa22.79■■□□□ 1.24
CCDC9-202ENST00000595659 CHRNA5P30532 468 aa22.79■■□□□ 1.24
CCDC9-202ENST00000595659 NFIXQ14938 502 aa22.79■■□□□ 1.24
CCDC9-202ENST00000595659 BCL2L12Q9HB09 334 aa22.78■■□□□ 1.24
CCDC9-202ENST00000595659 ADAMTS7Q9UKP4 1686 aa22.77■■□□□ 1.24
CCDC9-202ENST00000595659 ADCY9O60503 1353 aa22.77■■□□□ 1.24
CCDC9-202ENST00000595659 ZNF330Q9Y3S2 320 aaPredicted RBP22.77■■□□□ 1.24
CCDC9-202ENST00000595659 HEG1Q9ULI3 1381 aa22.76■■□□□ 1.23
CCDC9-202ENST00000595659 BTBD11A6QL63 1104 aa22.76■■□□□ 1.23
CCDC9-202ENST00000595659 BICDL1Q6ZP65 573 aa22.76■■□□□ 1.23
CCDC9-202ENST00000595659 MCM10Q7L590 875 aa22.76■■□□□ 1.23
CCDC9-202ENST00000595659 PIM2Q9P1W9 311 aa22.76■■□□□ 1.23
CCDC9-202ENST00000595659 DCTN1Q14203 1278 aa22.75■■□□□ 1.23
CCDC9-202ENST00000595659 FMNL2Q96PY5 1086 aa22.75■■□□□ 1.23
CCDC9-202ENST00000595659 N4BP2Q86UW6 1770 aaPredicted RBP22.75■■□□□ 1.23
CCDC9-202ENST00000595659 CEMIPQ8WUJ3 1361 aa22.75■■□□□ 1.23
CCDC9-202ENST00000595659 EIF5P55010 431 aaKnown RBP22.74■■□□□ 1.23
CCDC9-202ENST00000595659 KIAA1551Q9HCM1 1747 aa22.74■■□□□ 1.23
CCDC9-202ENST00000595659 A1BGP04217 495 aa22.73■■□□□ 1.23
CCDC9-202ENST00000595659 SERPINB2P05120 415 aa22.73■■□□□ 1.23
CCDC9-202ENST00000595659 DALRD3Q5D0E6 543 aaKnown RBP22.73■■□□□ 1.23
CCDC9-202ENST00000595659 RTF1Q92541 710 aaKnown RBP22.73■■□□□ 1.23
CCDC9-202ENST00000595659 TEX13AQ9BXU3 409 aaPredicted RBP22.73■■□□□ 1.23
CCDC9-202ENST00000595659 TBC1D2BQ9UPU7 963 aa22.73■■□□□ 1.23
CCDC9-202ENST00000595659 KIF13BQ9NQT8 1826 aa22.71■■□□□ 1.23
CCDC9-202ENST00000595659 PRAMEF22A3QJZ6 481 aa22.71■■□□□ 1.23
CCDC9-202ENST00000595659 A0A087WZG4 1122 aa22.7■■□□□ 1.22
CCDC9-202ENST00000595659 PIP4K2AP48426 406 aaPredicted RBP22.7■■□□□ 1.22
CCDC9-202ENST00000595659 TBC1D9BQ66K14 1250 aa22.69■■□□□ 1.22
CCDC9-202ENST00000595659 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
CCDC9-202ENST00000595659 C9orf131Q5VYM1 1079 aa22.68■■□□□ 1.22
CCDC9-202ENST00000595659 CCDC24Q8N4L8 307 aa22.68■■□□□ 1.22
CCDC9-202ENST00000595659 IL6STP40189 918 aaPredicted RBP22.67■■□□□ 1.22
CCDC9-202ENST00000595659 MIS18AQ9NYP9 233 aa22.67■■□□□ 1.22
CCDC9-202ENST00000595659 UBR2Q8IWV8 1755 aa22.66■■□□□ 1.22
CCDC9-202ENST00000595659 NPM2Q86SE8 214 aaKnown RBP22.66■■□□□ 1.22
CCDC9-202ENST00000595659 VIRMAQ69YN4 1812 aaKnown RBP22.66■■□□□ 1.22
CCDC9-202ENST00000595659 KIF3CO14782 793 aa22.65■■□□□ 1.22
CCDC9-202ENST00000595659 C2CD5Q86YS7 1000 aa22.65■■□□□ 1.22
CCDC9-202ENST00000595659 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
CCDC9-202ENST00000595659 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
CCDC9-202ENST00000595659 CAMTA2O94983 1202 aa22.63■■□□□ 1.21
CCDC9-202ENST00000595659 SNRPA1P09661 255 aaKnown RBP22.63■■□□□ 1.21
CCDC9-202ENST00000595659 TAF7Q15545 349 aaPredicted RBP22.62■■□□□ 1.21
CCDC9-202ENST00000595659 DZIP3Q86Y13 1208 aaKnown RBP22.62■■□□□ 1.21
CCDC9-202ENST00000595659 RNF181Q9P0P0 153 aa22.62■■□□□ 1.21
CCDC9-202ENST00000595659 H0YIN7 160 aa22.61■■□□□ 1.21
CCDC9-202ENST00000595659 NEFMP07197 916 aa22.61■■□□□ 1.21
CCDC9-202ENST00000595659 THUMPD2Q9BTF0 503 aaKnown RBP22.61■■□□□ 1.21
CCDC9-202ENST00000595659 NMRK2Q9NPI5 230 aa22.61■■□□□ 1.21
CCDC9-202ENST00000595659 SIPA1L3O60292 1781 aaPredicted RBP22.61■■□□□ 1.21
CCDC9-202ENST00000595659 RASSF7Q02833 373 aa22.6■■□□□ 1.21
CCDC9-202ENST00000595659 PRR5LQ6MZQ0 368 aa22.6■■□□□ 1.21
CCDC9-202ENST00000595659 TTLL6Q8N841 843 aa22.6■■□□□ 1.21
CCDC9-202ENST00000595659 PLEKHF1Q96S99 279 aa22.6■■□□□ 1.21
CCDC9-202ENST00000595659 SETDB2Q96T68 719 aa22.6■■□□□ 1.21
CCDC9-202ENST00000595659 ZNF622Q969S3 477 aaKnown RBP eCLIP22.59■■□□□ 1.213e-10■■□□□ 12.3
CCDC9-202ENST00000595659 NBPF26B4DH59 902 aa22.58■■□□□ 1.21
CCDC9-202ENST00000595659 NPHP1O15259 732 aa22.58■■□□□ 1.21
CCDC9-202ENST00000595659 NBPF10Q6P3W6 841 aaKnown RBP22.58■■□□□ 1.21
CCDC9-202ENST00000595659 NBPF15Q8N660 670 aa22.58■■□□□ 1.21
CCDC9-202ENST00000595659 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
CCDC9-202ENST00000595659 BRIP1Q9BX63 1249 aa22.57■■□□□ 1.2
CCDC9-202ENST00000595659 ZNF219Q9P2Y4 722 aaPredicted RBP22.57■■□□□ 1.2
CCDC9-202ENST00000595659 BRCA1P38398 1863 aaKnown RBP22.56■■□□□ 1.2
CCDC9-202ENST00000595659 NFE2L2Q16236 605 aa22.56■■□□□ 1.2
CCDC9-202ENST00000595659 CNBD1Q8NA66 436 aa22.56■■□□□ 1.2
CCDC9-202ENST00000595659 HSPA6P17066 643 aa22.55■■□□□ 1.2
CCDC9-202ENST00000595659 PDE6BP35913 854 aa22.55■■□□□ 1.2
CCDC9-202ENST00000595659 PRELPP51888 382 aa22.55■■□□□ 1.2
CCDC9-202ENST00000595659 NGEFQ8N5V2 710 aa22.54■■□□□ 1.2
CCDC9-202ENST00000595659 AFDNP55196 1824 aaKnown RBP22.54■■□□□ 1.2
CCDC9-202ENST00000595659 MAPK8IP3Q9UPT6 1336 aa22.54■■□□□ 1.2
CCDC9-202ENST00000595659 NRXN2Q9P2S2 1712 aa22.54■■□□□ 1.2
CCDC9-202ENST00000595659 FAM177BA6PVY3 158 aa22.52■■□□□ 1.2
CCDC9-202ENST00000595659 C21orf2O43822 256 aa22.52■■□□□ 1.2
CCDC9-202ENST00000595659 TOMM70O94826 608 aa22.52■■□□□ 1.2
CCDC9-202ENST00000595659 ST5P78524 1137 aa22.52■■□□□ 1.2
CCDC9-202ENST00000595659 RALBP1Q15311 655 aa22.52■■□□□ 1.2
CCDC9-202ENST00000595659 LMNB1P20700 586 aa22.51■■□□□ 1.19
CCDC9-202ENST00000595659 NBPF5PQ86XG9 351 aaPredicted RBP22.51■■□□□ 1.19
CCDC9-202ENST00000595659 PNISRQ8TF01 805 aaKnown RBP22.51■■□□□ 1.19
CCDC9-202ENST00000595659 PNNQ9H307 717 aaKnown RBP22.51■■□□□ 1.19
CCDC9-202ENST00000595659 RRAGCQ9HB90 399 aa22.51■■□□□ 1.19
CCDC9-202ENST00000595659 SCN7AQ01118 1682 aa22.5■■□□□ 1.19
CCDC9-202ENST00000595659 NFKBIEO00221 500 aa22.5■■□□□ 1.19
CCDC9-202ENST00000595659 EIF4A1P60842 406 aaKnown RBP22.5■■□□□ 1.19
CCDC9-202ENST00000595659 CLEC4GQ6UXB4 293 aa22.5■■□□□ 1.19
CCDC9-202ENST00000595659 ZNF652Q9Y2D9 606 aa22.5■■□□□ 1.19
CCDC9-202ENST00000595659 RRP7AQ9Y3A4 280 aaKnown RBP22.5■■□□□ 1.19
CCDC9-202ENST00000595659 ARFGEF1Q9Y6D6 1849 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms