RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TRAK2O60296 914 aa21■□□□□ 0.95
SHKBP1-205ENST00000594973 SRCIN1Q9C0H9 1055 aa21■□□□□ 0.95
SHKBP1-205ENST00000594973 GRPEL1Q9HAV7 217 aa21■□□□□ 0.95
SHKBP1-205ENST00000594973 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-205ENST00000594973 TBC1D9Q6ZT07 1266 aa20.99■□□□□ 0.95
SHKBP1-205ENST00000594973 DBF4Q9UBU7 674 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-205ENST00000594973 COL18A1P39060 1754 aa20.99■□□□□ 0.95
SHKBP1-205ENST00000594973 PROSER3Q2NL68 480 aa20.99■□□□□ 0.95
SHKBP1-205ENST00000594973 NFATC2IPQ8NCF5 419 aa20.99■□□□□ 0.95
SHKBP1-205ENST00000594973 PRDM11Q9NQV5 511 aa20.99■□□□□ 0.95
SHKBP1-205ENST00000594973 DNAAF4Q8WXU2 420 aa20.98■□□□□ 0.95
SHKBP1-205ENST00000594973 PXDNLA1KZ92 1463 aa20.98■□□□□ 0.95
SHKBP1-205ENST00000594973 CPDO75976 1380 aa20.98■□□□□ 0.95
SHKBP1-205ENST00000594973 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
SHKBP1-205ENST00000594973 CHMP5Q9NZZ3 219 aa20.98■□□□□ 0.95
SHKBP1-205ENST00000594973 KDM6AO15550 1401 aaPredicted RBP20.97■□□□□ 0.95
SHKBP1-205ENST00000594973 TTC22Q5TAA0 569 aa20.97■□□□□ 0.95
SHKBP1-205ENST00000594973 IFNL2Q8IZJ0 200 aa20.97■□□□□ 0.95
SHKBP1-205ENST00000594973 ATP8B2P98198 1209 aa20.96■□□□□ 0.95
SHKBP1-205ENST00000594973 ARXQ96QS3 562 aa20.96■□□□□ 0.95
SHKBP1-205ENST00000594973 ZNF790Q6PG37 636 aa20.96■□□□□ 0.95
SHKBP1-205ENST00000594973 DDX11L8A8MPP1 907 aa20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 CYP27B1O15528 508 aa20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 HEG1Q9ULI3 1381 aa20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 SOS2Q07890 1332 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 ERBB4Q15303 1308 aa20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 CDC45O75419 566 aa20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 BEND3Q5T5X7 828 aa20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 TRIM44Q96DX7 344 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 GZF1Q9H116 711 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 ADCY9O60503 1353 aa20.95■□□□□ 0.94
SHKBP1-205ENST00000594973 NBPF7P0C2Y1 421 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-205ENST00000594973 TERF1P54274 439 aa20.93■□□□□ 0.94
SHKBP1-205ENST00000594973 TOM1L2Q6ZVM7 507 aa20.93■□□□□ 0.94
SHKBP1-205ENST00000594973 MAP3K2Q9Y2U5 619 aa20.93■□□□□ 0.94
SHKBP1-205ENST00000594973 CRYBG1Q9Y4K1 1723 aa20.93■□□□□ 0.94
SHKBP1-205ENST00000594973 AIMP1Q12904 312 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-205ENST00000594973 LRRCC1Q9C099 1032 aa20.92■□□□□ 0.94
SHKBP1-205ENST00000594973 DCAF5Q96JK2 942 aa20.92■□□□□ 0.94
SHKBP1-205ENST00000594973 PPP1R42Q7Z4L9 355 aa20.91■□□□□ 0.94
SHKBP1-205ENST00000594973 SIPA1L3O60292 1781 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 SDSP20132 328 aa20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 RBM25P49756 843 aaKnown RBP20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 TSHZ3Q63HK5 1081 aa20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 SPRYD3Q8NCJ5 442 aa20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 ADAMTS7Q9UKP4 1686 aa20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 ZNF496Q96IT1 587 aaPredicted RBP20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 MAP7D2Q96T17 732 aa20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 HYPKQ9NX55 129 aa20.9■□□□□ 0.94
SHKBP1-205ENST00000594973 MYL6BP14649 208 aa20.89■□□□□ 0.94
SHKBP1-205ENST00000594973 KSR2Q6VAB6 950 aa20.89■□□□□ 0.94
SHKBP1-205ENST00000594973 ABCC6O95255 1503 aa20.89■□□□□ 0.94
SHKBP1-205ENST00000594973 WDR17Q8IZU2 1322 aa20.89■□□□□ 0.93
SHKBP1-205ENST00000594973 TTC5Q8N0Z6 440 aa20.89■□□□□ 0.93
SHKBP1-205ENST00000594973 STRN4Q9NRL3 753 aa20.89■□□□□ 0.93
SHKBP1-205ENST00000594973 PRDM4Q9UKN5 801 aa20.89■□□□□ 0.93
SHKBP1-205ENST00000594973 IBTKQ9P2D0 1353 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-205ENST00000594973 SRGAP3O43295 1099 aa20.88■□□□□ 0.93
SHKBP1-205ENST00000594973 PDE1AP54750 535 aa20.88■□□□□ 0.93
SHKBP1-205ENST00000594973 DDX21Q9NR30 783 aaKnown RBP eCLIP20.88■□□□□ 0.93
SHKBP1-205ENST00000594973 N4BP2Q86UW6 1770 aaPredicted RBP20.88■□□□□ 0.93
SHKBP1-205ENST00000594973 PDIA6Q15084 440 aa20.88■□□□□ 0.93
SHKBP1-205ENST00000594973 CWF19L2Q2TBE0 894 aaKnown RBP20.88■□□□□ 0.93
SHKBP1-205ENST00000594973 SSH3Q8TE77 659 aa20.88■□□□□ 0.93
SHKBP1-205ENST00000594973 CABP4P57796 275 aa20.87■□□□□ 0.93
SHKBP1-205ENST00000594973 C9orf78Q9NZ63 289 aaPredicted RBP20.87■□□□□ 0.93
SHKBP1-205ENST00000594973 SCN11AQ9UI33 1791 aa20.87■□□□□ 0.93
SHKBP1-205ENST00000594973 SURF6O75683 361 aaKnown RBP20.87■□□□□ 0.93
SHKBP1-205ENST00000594973 HSP90AB1P08238 724 aaKnown RBP20.86■□□□□ 0.93
SHKBP1-205ENST00000594973 IL1RAPL2Q9NP60 686 aa20.86■□□□□ 0.93
SHKBP1-205ENST00000594973 PIP4K2AP48426 406 aaPredicted RBP20.86■□□□□ 0.93
SHKBP1-205ENST00000594973 KIAA1211Q6ZU35 1233 aa20.86■□□□□ 0.93
SHKBP1-205ENST00000594973 DDX58O95786 925 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-205ENST00000594973 MX1P20591 662 aa20.84■□□□□ 0.93
SHKBP1-205ENST00000594973 ZCRB1Q8TBF4 217 aaKnown RBP20.84■□□□□ 0.93
SHKBP1-205ENST00000594973 USP16Q9Y5T5 823 aa20.84■□□□□ 0.93
SHKBP1-205ENST00000594973 COL5A2P05997 1499 aaPredicted RBP20.84■□□□□ 0.93
SHKBP1-205ENST00000594973 PTMSP20962 102 aa20.84■□□□□ 0.93
SHKBP1-205ENST00000594973 EVA1CP58658 441 aa20.84■□□□□ 0.93
SHKBP1-205ENST00000594973 OSBPL3Q9H4L5 887 aa20.84■□□□□ 0.93
SHKBP1-205ENST00000594973 POLA2Q14181 598 aa20.83■□□□□ 0.93
SHKBP1-205ENST00000594973 LARP1Q6PKG0 1096 aaKnown RBP20.83■□□□□ 0.93
SHKBP1-205ENST00000594973 CASC1Q6TDU7 716 aa20.83■□□□□ 0.93
SHKBP1-205ENST00000594973 HSCBQ8IWL3 235 aa20.83■□□□□ 0.93
SHKBP1-205ENST00000594973 OFD1O75665 1012 aa20.83■□□□□ 0.92
SHKBP1-205ENST00000594973 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.92
SHKBP1-205ENST00000594973 RIC3Q7Z5B4 369 aa20.83■□□□□ 0.92
SHKBP1-205ENST00000594973 KIF2CQ99661 725 aa20.83■□□□□ 0.92
SHKBP1-205ENST00000594973 SALL3Q9BXA9 1300 aa20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 ALDH1L1O75891 902 aa20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 DDX54Q8TDD1 881 aaKnown RBP20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 XAGE3Q8WTP9 111 aa20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 FMNL2Q96PY5 1086 aa20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 PCDH11XQ9BZA7 1347 aa20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 PCDH11YQ9BZA8 1340 aa20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 SKOR2Q2VWA4 1001 aaPredicted RBP20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 COPS6Q7L5N1 327 aa20.82■□□□□ 0.92
SHKBP1-205ENST00000594973 PKD1L3Q7Z443 1732 aa20.81■□□□□ 0.92
SHKBP1-205ENST00000594973 PLEKHG2Q9H7P9 1386 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms