RNA–Protein interactions for RNA: ENST00000592396.1

SAFB-212, Transcript of scaffold attachment factor B, humanhuman

TSL 4

Gene SAFB, Length 620 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-212ENST00000592396 HEG1Q9ULI3 1381 aa8□□□□□ -1.13
SAFB-212ENST00000592396 DICER1Q9UPY3 1922 aaKnown RBP8□□□□□ -1.13
SAFB-212ENST00000592396 HTATSF1O43719 755 aaKnown RBP8□□□□□ -1.13
SAFB-212ENST00000592396 SLC4A2P04920 1241 aa8□□□□□ -1.13
SAFB-212ENST00000592396 NEFMP07197 916 aa8□□□□□ -1.13
SAFB-212ENST00000592396 PHACTR3Q96KR7 559 aa8□□□□□ -1.13
SAFB-212ENST00000592396 CCDC87Q9NVE4 849 aa8□□□□□ -1.13
SAFB-212ENST00000592396 CD2APQ9Y5K6 639 aa8□□□□□ -1.13
SAFB-212ENST00000592396 U3KPZ7 1027 aaPredicted RBP8□□□□□ -1.13
SAFB-212ENST00000592396 CACNA1FO60840 1977 aa8□□□□□ -1.13
SAFB-212ENST00000592396 SOS1Q07889 1333 aaPredicted RBP8□□□□□ -1.13
SAFB-212ENST00000592396 USP42Q9H9J4 1324 aaKnown RBP8□□□□□ -1.13
SAFB-212ENST00000592396 MAPK8IP3Q9UPT6 1336 aa8□□□□□ -1.13
SAFB-212ENST00000592396 CYP19A1P11511 503 aaPredicted RBP7.99□□□□□ -1.13
SAFB-212ENST00000592396 RFC4P35249 363 aa7.99□□□□□ -1.13
SAFB-212ENST00000592396 DDX10Q13206 875 aaKnown RBP7.99□□□□□ -1.13
SAFB-212ENST00000592396 SLC39A6Q13433 755 aa7.99□□□□□ -1.13
SAFB-212ENST00000592396 TRAPPC3LQ5T215 181 aa7.99□□□□□ -1.13
SAFB-212ENST00000592396 ZNF790Q6PG37 636 aa7.99□□□□□ -1.13
SAFB-212ENST00000592396 DNAJC10Q8IXB1 793 aa7.99□□□□□ -1.13
SAFB-212ENST00000592396 KLHL34Q8N239 644 aa7.99□□□□□ -1.13
SAFB-212ENST00000592396 IL17REQ8NFR9 667 aa7.99□□□□□ -1.13
SAFB-212ENST00000592396 RTF1Q92541 710 aaKnown RBP7.99□□□□□ -1.13
SAFB-212ENST00000592396 PNNQ9H307 717 aaKnown RBP7.99□□□□□ -1.13
SAFB-212ENST00000592396 LAMB2P55268 1798 aa7.98□□□□□ -1.13
SAFB-212ENST00000592396 INTS5Q6P9B9 1019 aaKnown RBP7.98□□□□□ -1.13
SAFB-212ENST00000592396 NLGN1Q8N2Q7 840 aa7.98□□□□□ -1.13
SAFB-212ENST00000592396 NLGN2Q8NFZ4 835 aa7.98□□□□□ -1.13
SAFB-212ENST00000592396 ARHGEF1Q92888 912 aaKnown RBP7.98□□□□□ -1.13
SAFB-212ENST00000592396 FMNL2Q96PY5 1086 aa7.98□□□□□ -1.13
SAFB-212ENST00000592396 STARD3NLO95772 234 aa7.97□□□□□ -1.13
SAFB-212ENST00000592396 MMP10P09238 476 aa7.97□□□□□ -1.13
SAFB-212ENST00000592396 GYS1P13807 737 aa7.97□□□□□ -1.13
SAFB-212ENST00000592396 NFE2L2Q16236 605 aa7.97□□□□□ -1.13
SAFB-212ENST00000592396 SMIM5Q71RC9 77 aa7.97□□□□□ -1.13
SAFB-212ENST00000592396 ZNF496Q96IT1 587 aaPredicted RBP7.97□□□□□ -1.13
SAFB-212ENST00000592396 PLEKHF1Q96S99 279 aa7.97□□□□□ -1.13
SAFB-212ENST00000592396 TEX13AQ9BXU3 409 aaPredicted RBP7.97□□□□□ -1.13
SAFB-212ENST00000592396 ZBTB1Q9Y2K1 713 aa7.97□□□□□ -1.13
SAFB-212ENST00000592396 FER1L6Q2WGJ9 1857 aa7.97□□□□□ -1.13
SAFB-212ENST00000592396 TNRC6CQ9HCJ0 1690 aaKnown RBP7.96□□□□□ -1.13
SAFB-212ENST00000592396 BTBD11A6QL63 1104 aa7.96□□□□□ -1.14
SAFB-212ENST00000592396 MCM10Q7L590 875 aa7.96□□□□□ -1.14
SAFB-212ENST00000592396 PRKRIP1Q9H875 184 aaPredicted RBP7.96□□□□□ -1.14
SAFB-212ENST00000592396 A0A087WZG4 1122 aa7.95□□□□□ -1.14
SAFB-212ENST00000592396 YY1P25490 414 aa7.95□□□□□ -1.14
SAFB-212ENST00000592396 LMOD3Q0VAK6 560 aa7.95□□□□□ -1.14
SAFB-212ENST00000592396 WDR43Q15061 677 aaKnown RBP eCLIP7.95□□□□□ -1.14
SAFB-212ENST00000592396 GPR162Q16538 588 aa7.95□□□□□ -1.14
SAFB-212ENST00000592396 PNISRQ8TF01 805 aaKnown RBP7.95□□□□□ -1.14
SAFB-212ENST00000592396 NARFQ9UHQ1 456 aa7.95□□□□□ -1.14
SAFB-212ENST00000592396 PARP3Q9Y6F1 533 aa7.95□□□□□ -1.14
SAFB-212ENST00000592396 GRIN3BO60391 1043 aa7.94□□□□□ -1.14
SAFB-212ENST00000592396 ZPR1O75312 459 aa7.94□□□□□ -1.14
SAFB-212ENST00000592396 IL6STP40189 918 aaPredicted RBP7.94□□□□□ -1.14
SAFB-212ENST00000592396 EIF5P55010 431 aaKnown RBP7.94□□□□□ -1.14
SAFB-212ENST00000592396 SRP68Q9UHB9 627 aaKnown RBP7.94□□□□□ -1.14
SAFB-212ENST00000592396 CARMIL3Q8ND23 1372 aa7.94□□□□□ -1.14
SAFB-212ENST00000592396 MYH3P11055 1940 aa7.93□□□□□ -1.14
SAFB-212ENST00000592396 POLRMTO00411 1230 aaKnown RBP7.93□□□□□ -1.14
SAFB-212ENST00000592396 RGL2O15211 777 aa7.93□□□□□ -1.14
SAFB-212ENST00000592396 SNRPA1P09661 255 aaKnown RBP7.93□□□□□ -1.14
SAFB-212ENST00000592396 YBX3P16989 372 aaKnown RBP eCLIP7.93□□□□□ -1.14
SAFB-212ENST00000592396 DDR1Q08345 913 aa7.93□□□□□ -1.14
SAFB-212ENST00000592396 DCTN1Q14203 1278 aa7.93□□□□□ -1.14
SAFB-212ENST00000592396 FKBP8Q14318 412 aa7.93□□□□□ -1.14
SAFB-212ENST00000592396 TAF7Q15545 349 aaPredicted RBP7.93□□□□□ -1.14
SAFB-212ENST00000592396 USPL1Q5W0Q7 1092 aa7.93□□□□□ -1.14
SAFB-212ENST00000592396 PELP1Q8IZL8 1130 aaKnown RBP7.93□□□□□ -1.14
SAFB-212ENST00000592396 ADCY9O60503 1353 aa7.93□□□□□ -1.14
SAFB-212ENST00000592396 DDX60Q8IY21 1712 aaKnown RBP7.92□□□□□ -1.14
SAFB-212ENST00000592396 SLX4Q8IY92 1834 aa7.92□□□□□ -1.14
SAFB-212ENST00000592396 KCNQ3O43525 872 aa7.92□□□□□ -1.14
SAFB-212ENST00000592396 CANXP27824 592 aaKnown RBP7.92□□□□□ -1.14
SAFB-212ENST00000592396 TGFB2P61812 414 aa7.92□□□□□ -1.14
SAFB-212ENST00000592396 ERBB4Q15303 1308 aa7.92□□□□□ -1.14
SAFB-212ENST00000592396 ATP10DQ9P241 1426 aa7.92□□□□□ -1.14
SAFB-212ENST00000592396 TM4SF1P30408 202 aa7.91□□□□□ -1.14
SAFB-212ENST00000592396 TMPOP42166 694 aaKnown RBP7.91□□□□□ -1.14
SAFB-212ENST00000592396 NFIXQ14938 502 aa7.91□□□□□ -1.14
SAFB-212ENST00000592396 NPM2Q86SE8 214 aaKnown RBP7.91□□□□□ -1.14
SAFB-212ENST00000592396 RUNDC1Q96C34 613 aa7.91□□□□□ -1.14
SAFB-212ENST00000592396 BCL2L12Q9HB09 334 aa7.91□□□□□ -1.14
SAFB-212ENST00000592396 BABAM1Q9NWV8 329 aa7.91□□□□□ -1.14
SAFB-212ENST00000592396 RIC1Q4ADV7 1423 aa7.91□□□□□ -1.14
SAFB-212ENST00000592396 IBTKQ9P2D0 1353 aaPredicted RBP7.9□□□□□ -1.14
SAFB-212ENST00000592396 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.14
SAFB-212ENST00000592396 RIPK4P57078 832 aa7.9□□□□□ -1.14
SAFB-212ENST00000592396 DZIP3Q86Y13 1208 aaKnown RBP7.9□□□□□ -1.14
SAFB-212ENST00000592396 THUMPD2Q9BTF0 503 aaKnown RBP7.9□□□□□ -1.14
SAFB-212ENST00000592396 ZNF652Q9Y2D9 606 aa7.9□□□□□ -1.14
SAFB-212ENST00000592396 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
SAFB-212ENST00000592396 LRRC37AA6NMS7 1700 aa7.89□□□□□ -1.15
SAFB-212ENST00000592396 PRAMEF22A3QJZ6 481 aa7.89□□□□□ -1.15
SAFB-212ENST00000592396 GIGYF1O75420 1035 aaPredicted RBP7.89□□□□□ -1.15
SAFB-212ENST00000592396 CAMTA2O94983 1202 aa7.89□□□□□ -1.15
SAFB-212ENST00000592396 A1BGP04217 495 aa7.89□□□□□ -1.15
SAFB-212ENST00000592396 EIF4A1P60842 406 aaKnown RBP7.89□□□□□ -1.15
SAFB-212ENST00000592396 CLEC4GQ6UXB4 293 aa7.89□□□□□ -1.15
SAFB-212ENST00000592396 CCDC146Q8IYE0 955 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms