RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ERLIN1O75477 346 aa15.64■□□□□ 0.09
SMARCA4-216ENST00000591545 MAP4K4O95819 1239 aaPredicted RBP15.64■□□□□ 0.09
SMARCA4-216ENST00000591545 CHD1LQ86WJ1 897 aa15.64■□□□□ 0.09
SMARCA4-216ENST00000591545 MCM4P33991 863 aa15.64■□□□□ 0.09
SMARCA4-216ENST00000591545 SLFN5Q08AF3 891 aa15.64■□□□□ 0.09
SMARCA4-216ENST00000591545 NBPF6Q5VWK0 638 aa15.64■□□□□ 0.09
SMARCA4-216ENST00000591545 NBPF5PQ86XG9 351 aaPredicted RBP15.64■□□□□ 0.09
SMARCA4-216ENST00000591545 NBPF4Q96M43 638 aa15.64■□□□□ 0.09
SMARCA4-216ENST00000591545 IMMTQ16891 758 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 BLOC1S2Q6QNY1 142 aa15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 CWC25Q9NXE8 425 aaPredicted RBP15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 NOL7Q9UMY1 257 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 POLD1P28340 1107 aa15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 GLRX3O76003 335 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 ERLIN2O94905 339 aa15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 LDHCP07864 332 aa15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 IL2RBP14784 551 aa15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 STIM1Q13586 685 aa15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 PPFIBP1Q86W92 1011 aa15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 ACSBG1Q96GR2 724 aa15.63■□□□□ 0.09
SMARCA4-216ENST00000591545 EIF3JO75822 258 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-216ENST00000591545 SERPINC1P01008 464 aa15.62■□□□□ 0.09
SMARCA4-216ENST00000591545 MKNK2Q9HBH9 465 aa15.62■□□□□ 0.09
SMARCA4-216ENST00000591545 ATP6V1AP38606 617 aa15.62■□□□□ 0.09
SMARCA4-216ENST00000591545 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
SMARCA4-216ENST00000591545 TMEM57Q8N5G2 664 aa15.62■□□□□ 0.09
SMARCA4-216ENST00000591545 PPIP5K1Q6PFW1 1433 aa15.61■□□□□ 0.09
SMARCA4-216ENST00000591545 ZNF76P36508 570 aa15.61■□□□□ 0.09
SMARCA4-216ENST00000591545 IL27Q8NEV9 243 aa15.61■□□□□ 0.09
SMARCA4-216ENST00000591545 CFAP45Q9UL16 551 aa15.61■□□□□ 0.09
SMARCA4-216ENST00000591545 EXOC6BQ9Y2D4 811 aa15.61■□□□□ 0.09
SMARCA4-216ENST00000591545 KCNA6P17658 529 aa15.61■□□□□ 0.09
SMARCA4-216ENST00000591545 CEP57L1Q8IYX8 460 aa15.61■□□□□ 0.09
SMARCA4-216ENST00000591545 ESPNB1AK53 854 aa15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 PDCL2Q8N4E4 241 aa15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 TARBP1Q13395 1621 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 SETDB2Q96T68 719 aa15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 DNMT1P26358 1616 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 FLIIQ13045 1269 aa15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 AXDND1Q5T1B0 1012 aaPredicted RBP15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 LARP1BQ659C4 914 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 CWC27Q6UX04 472 aaKnown RBP15.6■□□□□ 0.09
SMARCA4-216ENST00000591545 RRP9O43818 475 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 LDHAL6AQ6ZMR3 332 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 CABLES1Q8TDN4 633 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 IQCEQ6IPM2 695 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 SPC24Q8NBT2 197 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 WASF1Q92558 559 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 ATP10AO60312 1499 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 GOLGA6L10A6NI86 522 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 KIF2AO00139 706 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 ME1P48163 572 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 TTLL5Q6EMB2 1281 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 NAPBQ9H115 298 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 NUTM1Q86Y26 1132 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 PTPRCP08575 1304 aa15.59■□□□□ 0.09
SMARCA4-216ENST00000591545 U3KPZ7 1027 aaPredicted RBP15.58■□□□□ 0.09
SMARCA4-216ENST00000591545 MINDY4BA8MYZ0 360 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 TSPYL1Q9H0U9 437 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 NUP62CLQ9H1M0 184 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 NUP160Q12769 1436 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 CCDC152Q4G0S7 254 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 SSH1Q8WYL5 1049 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 CDCA7Q9BWT1 371 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 MYO1BO43795 1136 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 STK3Q13188 491 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 SYCP1Q15431 976 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 ZNF444Q8N0Y2 327 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 MAP3K2Q9Y2U5 619 aa15.58■□□□□ 0.08
SMARCA4-216ENST00000591545 ZFYVE27Q5T4F4 411 aa15.57■□□□□ 0.08
SMARCA4-216ENST00000591545 SMTNL1A8MU46 457 aa15.57■□□□□ 0.08
SMARCA4-216ENST00000591545 SPTY2D1Q68D10 685 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-216ENST00000591545 SPATA32Q96LK8 384 aa15.57■□□□□ 0.08
SMARCA4-216ENST00000591545 BMP2KQ9NSY1 1161 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-216ENST00000591545 TFCP2L1Q9NZI6 479 aa15.57■□□□□ 0.08
SMARCA4-216ENST00000591545 AKAP4Q5JQC9 854 aa15.57■□□□□ 0.08
SMARCA4-216ENST00000591545 ZSCAN30Q86W11 494 aa15.57■□□□□ 0.08
SMARCA4-216ENST00000591545 F6X3S4 739 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 NLRP3Q96P20 1036 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 PDRG1Q9NUG6 133 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 SEC63Q9UGP8 760 aaKnown RBP15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 PIK3R4Q99570 1358 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 UQCRHLA0A096LP55 91 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 UQCRHP07919 91 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 TNIP1Q15025 636 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 ANKRD13DQ6ZTN6 518 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 KIAA0754O94854 1291 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 ZHX3Q9H4I2 956 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 TRPM2O94759 1503 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 ATP5J2-PTCD1G3V325 749 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 BAG3O95817 575 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 MX1P20591 662 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 WDR78Q5VTH9 848 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 RALGAPBQ86X10 1494 aa15.56■□□□□ 0.08
SMARCA4-216ENST00000591545 GCP02774 474 aa15.55■□□□□ 0.08
SMARCA4-216ENST00000591545 BOLA2Q9H3K6 86 aa15.55■□□□□ 0.08
SMARCA4-216ENST00000591545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.55■□□□□ 0.081e-6■■■■■ 95.5
SMARCA4-216ENST00000591545 RTCBQ9Y3I0 505 aaKnown RBP15.55■□□□□ 0.08
SMARCA4-216ENST00000591545 GOLGA6L7A0A1B0GV03 622 aa15.55■□□□□ 0.08
SMARCA4-216ENST00000591545 BRPF1P55201 1214 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms