RNA–Protein interactions for RNA: ENST00000591474.5

CXXC1-216, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-216ENST00000591474 VSIG10Q8N0Z9 540 aa30.5■■■□□ 2.47
CXXC1-216ENST00000591474 NRXN2Q9P2S2 1712 aa30.5■■■□□ 2.47
CXXC1-216ENST00000591474 AFDNP55196 1824 aaKnown RBP30.5■■■□□ 2.47
CXXC1-216ENST00000591474 CHRNA5P30532 468 aa30.49■■■□□ 2.47
CXXC1-216ENST00000591474 IFFO2Q5TF58 517 aa30.49■■■□□ 2.47
CXXC1-216ENST00000591474 NMRK2Q9NPI5 230 aa30.49■■■□□ 2.47
CXXC1-216ENST00000591474 NARFQ9UHQ1 456 aa30.49■■■□□ 2.47
CXXC1-216ENST00000591474 ZBTB1Q9Y2K1 713 aa30.49■■■□□ 2.47
CXXC1-216ENST00000591474 APLP1P51693 650 aa30.47■■■□□ 2.47
CXXC1-216ENST00000591474 CC2D1BQ5T0F9 858 aaKnown RBP30.47■■■□□ 2.47
CXXC1-216ENST00000591474 COL3A1P02461 1466 aaPredicted RBP30.46■■■□□ 2.47
CXXC1-216ENST00000591474 NPC1L1Q9UHC9 1359 aa30.45■■■□□ 2.47
CXXC1-216ENST00000591474 SBF1O95248 1867 aa30.45■■■□□ 2.47
CXXC1-216ENST00000591474 NFIXQ14938 502 aa30.45■■■□□ 2.47
CXXC1-216ENST00000591474 BCL2L12Q9HB09 334 aa30.43■■■□□ 2.46
CXXC1-216ENST00000591474 RNF181Q9P0P0 153 aa30.43■■■□□ 2.46
CXXC1-216ENST00000591474 DLEC1Q9Y238 1755 aa30.43■■■□□ 2.46
CXXC1-216ENST00000591474 RBM46Q8TBY0 533 aaKnown RBP30.41■■■□□ 2.46
CXXC1-216ENST00000591474 TTC5Q8N0Z6 440 aa30.4■■■□□ 2.46
CXXC1-216ENST00000591474 KDM2BQ8NHM5 1336 aa30.4■■■□□ 2.46
CXXC1-216ENST00000591474 SIPA1L3O60292 1781 aaPredicted RBP30.39■■■□□ 2.46
CXXC1-216ENST00000591474 SERPINB2P05120 415 aa30.38■■■□□ 2.45
CXXC1-216ENST00000591474 TNRC6CQ9HCJ0 1690 aaKnown RBP30.38■■■□□ 2.45
CXXC1-216ENST00000591474 STARD3NLO95772 234 aa30.37■■■□□ 2.45
CXXC1-216ENST00000591474 CANXP27824 592 aaKnown RBP30.37■■■□□ 2.45
CXXC1-216ENST00000591474 EIF5P55010 431 aaKnown RBP30.37■■■□□ 2.45
CXXC1-216ENST00000591474 GAS2L2Q8NHY3 880 aa30.37■■■□□ 2.45
CXXC1-216ENST00000591474 C16orf71Q8IYS4 520 aaPredicted RBP30.36■■■□□ 2.45
CXXC1-216ENST00000591474 DNAJC5GQ8N7S2 189 aa30.35■■■□□ 2.45
CXXC1-216ENST00000591474 IL17REQ8NFR9 667 aa30.35■■■□□ 2.45
CXXC1-216ENST00000591474 ZC3H4Q9UPT8 1303 aaKnown RBP30.35■■■□□ 2.45
CXXC1-216ENST00000591474 WDR90Q96KV7 1748 aa30.35■■■□□ 2.45
CXXC1-216ENST00000591474 SCN7AQ01118 1682 aa30.34■■■□□ 2.45
CXXC1-216ENST00000591474 HEG1Q9ULI3 1381 aa30.34■■■□□ 2.45
CXXC1-216ENST00000591474 A0A087WZG4 1122 aa30.34■■■□□ 2.45
CXXC1-216ENST00000591474 GNAT3A8MTJ3 354 aa30.34■■■□□ 2.45
CXXC1-216ENST00000591474 U2SURPO15042 1029 aaKnown RBP30.34■■■□□ 2.45
CXXC1-216ENST00000591474 TEFQ10587 303 aa30.34■■■□□ 2.45
CXXC1-216ENST00000591474 ZNF790Q6PG37 636 aa30.34■■■□□ 2.45
CXXC1-216ENST00000591474 RASSF7Q02833 373 aa30.33■■■□□ 2.45
CXXC1-216ENST00000591474 FSTL1Q12841 308 aa30.33■■■□□ 2.45
CXXC1-216ENST00000591474 ZNF496Q96IT1 587 aaPredicted RBP30.33■■■□□ 2.45
CXXC1-216ENST00000591474 CARMIL3Q8ND23 1372 aa30.32■■■□□ 2.44
CXXC1-216ENST00000591474 TTLL6Q8N841 843 aa30.32■■■□□ 2.44
CXXC1-216ENST00000591474 TEX13AQ9BXU3 409 aaPredicted RBP30.32■■■□□ 2.44
CXXC1-216ENST00000591474 C2CD5Q86YS7 1000 aa30.3■■■□□ 2.44
CXXC1-216ENST00000591474 RRAGCQ9HB90 399 aa30.3■■■□□ 2.44
CXXC1-216ENST00000591474 CEMIPQ8WUJ3 1361 aa30.29■■■□□ 2.44
CXXC1-216ENST00000591474 ANKRD31Q8N7Z5 1873 aa30.29■■■□□ 2.44
CXXC1-216ENST00000591474 H0YIN7 160 aa30.28■■■□□ 2.44
CXXC1-216ENST00000591474 LMNB1P20700 586 aa30.28■■■□□ 2.44
CXXC1-216ENST00000591474 BICDL1Q6ZP65 573 aa30.28■■■□□ 2.44
CXXC1-216ENST00000591474 IL6STP40189 918 aaPredicted RBP30.27■■■□□ 2.44
CXXC1-216ENST00000591474 CNGB1Q14028 1251 aaPredicted RBP30.27■■■□□ 2.44
CXXC1-216ENST00000591474 TBC1D9BQ66K14 1250 aa30.27■■■□□ 2.44
CXXC1-216ENST00000591474 PRELPP51888 382 aa30.26■■■□□ 2.43
CXXC1-216ENST00000591474 FMNL2Q96PY5 1086 aa30.26■■■□□ 2.43
CXXC1-216ENST00000591474 TIAM2Q8IVF5 1701 aa30.25■■■□□ 2.43
CXXC1-216ENST00000591474 PDZRN3Q9UPQ7 1066 aa30.25■■■□□ 2.43
CXXC1-216ENST00000591474 CCDC88AQ3V6T2 1871 aa30.25■■■□□ 2.43
CXXC1-216ENST00000591474 RSPH6AQ9H0K4 717 aa30.23■■■□□ 2.43
CXXC1-216ENST00000591474 COL11A2P13942 1736 aaPredicted RBP30.22■■■□□ 2.43
CXXC1-216ENST00000591474 GLTPD2A6NH11 291 aa30.22■■■□□ 2.43
CXXC1-216ENST00000591474 NFKBIEO00221 500 aa30.22■■■□□ 2.43
CXXC1-216ENST00000591474 BRIP1Q9BX63 1249 aa30.22■■■□□ 2.43
CXXC1-216ENST00000591474 TBC1D2BQ9UPU7 963 aa30.22■■■□□ 2.43
CXXC1-216ENST00000591474 ZNF330Q9Y3S2 320 aaPredicted RBP30.22■■■□□ 2.43
CXXC1-216ENST00000591474 BCORQ6W2J9 1755 aa30.21■■■□□ 2.43
CXXC1-216ENST00000591474 PRKAR2BP31323 418 aa30.21■■■□□ 2.43
CXXC1-216ENST00000591474 PDE6BP35913 854 aa30.21■■■□□ 2.43
CXXC1-216ENST00000591474 PRR5LQ6MZQ0 368 aa30.21■■■□□ 2.43
CXXC1-216ENST00000591474 SMC1BQ8NDV3 1235 aa30.21■■■□□ 2.43
CXXC1-216ENST00000591474 PHACTR3Q96KR7 559 aa30.21■■■□□ 2.43
CXXC1-216ENST00000591474 CFAP53Q96M91 514 aa30.21■■■□□ 2.43
CXXC1-216ENST00000591474 BTBD11A6QL63 1104 aa30.2■■■□□ 2.43
CXXC1-216ENST00000591474 A1BGP04217 495 aa30.2■■■□□ 2.43
CXXC1-216ENST00000591474 KLRG1Q96E93 195 aa30.2■■■□□ 2.43
CXXC1-216ENST00000591474 HTRA3P83110 453 aa30.19■■■□□ 2.42
CXXC1-216ENST00000591474 CAMTA2O94983 1202 aa30.18■■■□□ 2.42
CXXC1-216ENST00000591474 ZNF622Q969S3 477 aaKnown RBP eCLIP30.18■■■□□ 2.423e-7■■□□□ 12.6
CXXC1-216ENST00000591474 FER1L6Q2WGJ9 1857 aa30.18■■■□□ 2.42
CXXC1-216ENST00000591474 KCNQ3O43525 872 aa30.17■■■□□ 2.42
CXXC1-216ENST00000591474 VEGFAP15692 232 aaPredicted RBP30.17■■■□□ 2.42
CXXC1-216ENST00000591474 NPM2Q86SE8 214 aaKnown RBP30.17■■■□□ 2.42
CXXC1-216ENST00000591474 SETDB2Q96T68 719 aa30.16■■■□□ 2.42
CXXC1-216ENST00000591474 DICER1Q9UPY3 1922 aaKnown RBP30.16■■■□□ 2.42
CXXC1-216ENST00000591474 JMYQ8N9B5 988 aa30.15■■■□□ 2.42
CXXC1-216ENST00000591474 NUDCQ9Y266 331 aa30.15■■■□□ 2.42
CXXC1-216ENST00000591474 CCDC24Q8N4L8 307 aa30.14■■■□□ 2.42
CXXC1-216ENST00000591474 CNBD1Q8NA66 436 aa30.14■■■□□ 2.42
CXXC1-216ENST00000591474 DZIP3Q86Y13 1208 aaKnown RBP30.13■■■□□ 2.41
CXXC1-216ENST00000591474 USP16Q9Y5T5 823 aa30.13■■■□□ 2.41
CXXC1-216ENST00000591474 ARFGEF2Q9Y6D5 1785 aa30.13■■■□□ 2.41
CXXC1-216ENST00000591474 C21orf2O43822 256 aa30.12■■■□□ 2.41
CXXC1-216ENST00000591474 PCNTO95613 3336 aa30.12■■■□□ 2.41
CXXC1-216ENST00000591474 ST5P78524 1137 aa30.11■■■□□ 2.41
CXXC1-216ENST00000591474 LTBP3Q9NS15 1303 aa30.11■■■□□ 2.41
CXXC1-216ENST00000591474 STYK1Q6J9G0 422 aa30.1■■■□□ 2.41
CXXC1-216ENST00000591474 RTF1Q92541 710 aaKnown RBP30.1■■■□□ 2.41
CXXC1-216ENST00000591474 CNKSR1Q969H4 720 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms