RNA–Protein interactions for RNA: ENST00000591304.1

CLPTM1-212, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-212ENST00000591304 ZBTB1Q9Y2K1 713 aa30.75■■■□□ 2.51
CLPTM1-212ENST00000591304 PNISRQ8TF01 805 aaKnown RBP30.74■■■□□ 2.51
CLPTM1-212ENST00000591304 WDR43Q15061 677 aaKnown RBP eCLIP30.73■■■□□ 2.51
CLPTM1-212ENST00000591304 PARP3Q9Y6F1 533 aa30.73■■■□□ 2.51
CLPTM1-212ENST00000591304 COL15A1P39059 1388 aa30.73■■■□□ 2.51
CLPTM1-212ENST00000591304 CHD4Q14839 1912 aa30.73■■■□□ 2.51
CLPTM1-212ENST00000591304 A0A087WZG4 1122 aa30.71■■■□□ 2.51
CLPTM1-212ENST00000591304 CANXP27824 592 aaKnown RBP30.71■■■□□ 2.51
CLPTM1-212ENST00000591304 SRP68Q9UHB9 627 aaKnown RBP30.71■■■□□ 2.51
CLPTM1-212ENST00000591304 NARFQ9UHQ1 456 aa30.71■■■□□ 2.51
CLPTM1-212ENST00000591304 ZNF316A6NFI3 1004 aaPredicted RBP30.7■■■□□ 2.51
CLPTM1-212ENST00000591304 KCNQ3O43525 872 aa30.7■■■□□ 2.51
CLPTM1-212ENST00000591304 YY1P25490 414 aa30.7■■■□□ 2.51
CLPTM1-212ENST00000591304 KIF13BQ9NQT8 1826 aa30.7■■■□□ 2.5
CLPTM1-212ENST00000591304 SNRPA1P09661 255 aaKnown RBP30.69■■■□□ 2.5
CLPTM1-212ENST00000591304 PELP1Q8IZL8 1130 aaKnown RBP30.69■■■□□ 2.5
CLPTM1-212ENST00000591304 EIF5P55010 431 aaKnown RBP30.68■■■□□ 2.5
CLPTM1-212ENST00000591304 LMOD3Q0VAK6 560 aa30.68■■■□□ 2.5
CLPTM1-212ENST00000591304 NPM2Q86SE8 214 aaKnown RBP30.68■■■□□ 2.5
CLPTM1-212ENST00000591304 GRIN3BO60391 1043 aa30.67■■■□□ 2.5
CLPTM1-212ENST00000591304 IL6STP40189 918 aaPredicted RBP30.67■■■□□ 2.5
CLPTM1-212ENST00000591304 FKBP8Q14318 412 aa30.67■■■□□ 2.5
CLPTM1-212ENST00000591304 USPL1Q5W0Q7 1092 aa30.67■■■□□ 2.5
CLPTM1-212ENST00000591304 RIPK4P57078 832 aa30.66■■■□□ 2.5
CLPTM1-212ENST00000591304 TGFB2P61812 414 aa30.65■■■□□ 2.5
CLPTM1-212ENST00000591304 KDM3BQ7LBC6 1761 aa30.64■■■□□ 2.5
CLPTM1-212ENST00000591304 TMPOP42166 694 aaKnown RBP30.64■■■□□ 2.5
CLPTM1-212ENST00000591304 RUNDC1Q96C34 613 aa30.64■■■□□ 2.5
CLPTM1-212ENST00000591304 C10orf71Q711Q0 1435 aa30.63■■■□□ 2.49
CLPTM1-212ENST00000591304 TM4SF1P30408 202 aa30.62■■■□□ 2.49
CLPTM1-212ENST00000591304 ADAMTS8Q9UP79 889 aa30.62■■■□□ 2.49
CLPTM1-212ENST00000591304 USP16Q9Y5T5 823 aa30.62■■■□□ 2.49
CLPTM1-212ENST00000591304 A1BGP04217 495 aa30.61■■■□□ 2.49
CLPTM1-212ENST00000591304 MIS18AQ9NYP9 233 aa30.6■■■□□ 2.49
CLPTM1-212ENST00000591304 YBX3P16989 372 aaKnown RBP eCLIP30.59■■■□□ 2.491e-8■■□□□ 12.1
CLPTM1-212ENST00000591304 CCDC146Q8IYE0 955 aa30.59■■■□□ 2.49
CLPTM1-212ENST00000591304 THUMPD2Q9BTF0 503 aaKnown RBP30.59■■■□□ 2.49
CLPTM1-212ENST00000591304 BABAM1Q9NWV8 329 aa30.59■■■□□ 2.49
CLPTM1-212ENST00000591304 UTRNP46939 3433 aa30.59■■■□□ 2.49
CLPTM1-212ENST00000591304 DDR1Q08345 913 aa30.58■■■□□ 2.49
CLPTM1-212ENST00000591304 ZNF330Q9Y3S2 320 aaPredicted RBP30.58■■■□□ 2.49
CLPTM1-212ENST00000591304 LAMB4A4D0S4 1761 aa30.58■■■□□ 2.49
CLPTM1-212ENST00000591304 GOLGB1Q14789 3259 aaKnown RBP30.57■■■□□ 2.48
CLPTM1-212ENST00000591304 POLRMTO00411 1230 aaKnown RBP30.57■■■□□ 2.48
CLPTM1-212ENST00000591304 NFIXQ14938 502 aa30.56■■■□□ 2.48
CLPTM1-212ENST00000591304 BCL2L12Q9HB09 334 aa30.56■■■□□ 2.48
CLPTM1-212ENST00000591304 SCN7AQ01118 1682 aa30.55■■■□□ 2.48
CLPTM1-212ENST00000591304 PRAMEF22A3QJZ6 481 aa30.55■■■□□ 2.48
CLPTM1-212ENST00000591304 EIF4A1P60842 406 aaKnown RBP30.55■■■□□ 2.48
CLPTM1-212ENST00000591304 N4BP2Q86UW6 1770 aaPredicted RBP30.55■■■□□ 2.48
CLPTM1-212ENST00000591304 KIAA1551Q9HCM1 1747 aa30.55■■■□□ 2.48
CLPTM1-212ENST00000591304 PXDNLA1KZ92 1463 aa30.55■■■□□ 2.48
CLPTM1-212ENST00000591304 GIGYF1O75420 1035 aaPredicted RBP30.54■■■□□ 2.48
CLPTM1-212ENST00000591304 TBC1D2BQ9UPU7 963 aa30.54■■■□□ 2.48
CLPTM1-212ENST00000591304 AFDNP55196 1824 aaKnown RBP30.53■■■□□ 2.48
CLPTM1-212ENST00000591304 TSPYL4Q9UJ04 414 aa30.53■■■□□ 2.48
CLPTM1-212ENST00000591304 NEUROD2Q15784 382 aa30.52■■■□□ 2.48
CLPTM1-212ENST00000591304 RRP7AQ9Y3A4 280 aaKnown RBP30.52■■■□□ 2.48
CLPTM1-212ENST00000591304 NRXN2Q9P2S2 1712 aa30.52■■■□□ 2.48
CLPTM1-212ENST00000591304 DZIP3Q86Y13 1208 aaKnown RBP30.51■■■□□ 2.47
CLPTM1-212ENST00000591304 A0A0G2JLW4 131 aa30.5■■■□□ 2.47
CLPTM1-212ENST00000591304 ANP32CO43423 234 aa30.5■■■□□ 2.47
CLPTM1-212ENST00000591304 SERPINB2P05120 415 aa30.5■■■□□ 2.47
CLPTM1-212ENST00000591304 BCORQ6W2J9 1755 aa30.5■■■□□ 2.47
CLPTM1-212ENST00000591304 RGL2O15211 777 aa30.49■■■□□ 2.47
CLPTM1-212ENST00000591304 BRCA1P38398 1863 aaKnown RBP30.48■■■□□ 2.47
CLPTM1-212ENST00000591304 CAMTA2O94983 1202 aa30.48■■■□□ 2.47
CLPTM1-212ENST00000591304 DPEP1P16444 411 aa30.48■■■□□ 2.47
CLPTM1-212ENST00000591304 CLEC4GQ6UXB4 293 aa30.48■■■□□ 2.47
CLPTM1-212ENST00000591304 ZNF652Q9Y2D9 606 aa30.48■■■□□ 2.47
CLPTM1-212ENST00000591304 NBPF26B4DH59 902 aa30.46■■■□□ 2.47
CLPTM1-212ENST00000591304 TBC1D9BQ66K14 1250 aa30.46■■■□□ 2.47
CLPTM1-212ENST00000591304 NBPF10Q6P3W6 841 aaKnown RBP30.46■■■□□ 2.47
CLPTM1-212ENST00000591304 BICDL1Q6ZP65 573 aa30.46■■■□□ 2.47
CLPTM1-212ENST00000591304 NBPF15Q8N660 670 aa30.46■■■□□ 2.47
CLPTM1-212ENST00000591304 TRIM35Q9UPQ4 493 aa30.46■■■□□ 2.47
CLPTM1-212ENST00000591304 CARMIL3Q8ND23 1372 aa30.45■■■□□ 2.47
CLPTM1-212ENST00000591304 PIP4K2AP48426 406 aaPredicted RBP30.45■■■□□ 2.47
CLPTM1-212ENST00000591304 SETDB2Q96T68 719 aa30.45■■■□□ 2.47
CLPTM1-212ENST00000591304 PIM2Q9P1W9 311 aa30.45■■■□□ 2.47
CLPTM1-212ENST00000591304 ERBB4Q15303 1308 aa30.44■■■□□ 2.46
CLPTM1-212ENST00000591304 WWC3Q9ULE0 1092 aa30.43■■■□□ 2.46
CLPTM1-212ENST00000591304 BCS1LQ9Y276 419 aa30.43■■■□□ 2.46
CLPTM1-212ENST00000591304 KCNA3P22001 575 aa30.42■■■□□ 2.46
CLPTM1-212ENST00000591304 ARFGEF1Q9Y6D6 1849 aa30.41■■■□□ 2.46
CLPTM1-212ENST00000591304 CHL1O00533 1208 aa30.41■■■□□ 2.46
CLPTM1-212ENST00000591304 PDZRN3Q9UPQ7 1066 aa30.41■■■□□ 2.46
CLPTM1-212ENST00000591304 APAF1O14727 1248 aa30.4■■■□□ 2.46
CLPTM1-212ENST00000591304 CALD1Q05682 793 aaKnown RBP30.4■■■□□ 2.46
CLPTM1-212ENST00000591304 DALRD3Q5D0E6 543 aaKnown RBP30.39■■■□□ 2.46
CLPTM1-212ENST00000591304 ZNF784Q8NCA9 323 aaPredicted RBP30.39■■■□□ 2.46
CLPTM1-212ENST00000591304 NPHP1O15259 732 aa30.37■■■□□ 2.45
CLPTM1-212ENST00000591304 CFAP44Q96MT7 982 aa30.37■■■□□ 2.45
CLPTM1-212ENST00000591304 LAS1LQ9Y4W2 734 aaKnown RBP30.37■■■□□ 2.45
CLPTM1-212ENST00000591304 ERVV-1B6SEH8 477 aa30.36■■■□□ 2.45
CLPTM1-212ENST00000591304 CHRNA5P30532 468 aa30.36■■■□□ 2.45
CLPTM1-212ENST00000591304 CNBD1Q8NA66 436 aa30.36■■■□□ 2.45
CLPTM1-212ENST00000591304 BRIP1Q9BX63 1249 aa30.36■■■□□ 2.45
CLPTM1-212ENST00000591304 MRS2Q9HD23 443 aa30.36■■■□□ 2.45
CLPTM1-212ENST00000591304 DLEC1Q9Y238 1755 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms