RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CCDC87Q9NVE4 849 aa24.84■■□□□ 1.57
DDX39A-214ENST00000590556 GNPATO15228 680 aa24.83■■□□□ 1.57
DDX39A-214ENST00000590556 KRT24Q2M2I5 525 aa24.83■■□□□ 1.57
DDX39A-214ENST00000590556 MYH14Q7Z406 1995 aaKnown RBP24.82■■□□□ 1.56
DDX39A-214ENST00000590556 INTS5Q6P9B9 1019 aaKnown RBP24.82■■□□□ 1.56
DDX39A-214ENST00000590556 FANCIQ9NVI1 1328 aa24.82■■□□□ 1.56
DDX39A-214ENST00000590556 PSDA5PKW4 1024 aaPredicted RBP24.81■■□□□ 1.56
DDX39A-214ENST00000590556 E9PSI1 815 aa24.81■■□□□ 1.56
DDX39A-214ENST00000590556 DUSP27Q5VZP5 1158 aa24.8■■□□□ 1.56
DDX39A-214ENST00000590556 RTCBQ9Y3I0 505 aaKnown RBP24.8■■□□□ 1.56
DDX39A-214ENST00000590556 LAMB4A4D0S4 1761 aa24.8■■□□□ 1.56
DDX39A-214ENST00000590556 RPS6KA4O75676 772 aa24.79■■□□□ 1.56
DDX39A-214ENST00000590556 C8orf58Q8NAV2 365 aa24.79■■□□□ 1.56
DDX39A-214ENST00000590556 TUBGCP6Q96RT7 1819 aa24.78■■□□□ 1.56
DDX39A-214ENST00000590556 A1BGP04217 495 aa24.78■■□□□ 1.56
DDX39A-214ENST00000590556 HOXB7P09629 217 aa24.78■■□□□ 1.56
DDX39A-214ENST00000590556 EIF2S2P20042 333 aaKnown RBP24.78■■□□□ 1.56
DDX39A-214ENST00000590556 CANXP27824 592 aaKnown RBP24.78■■□□□ 1.56
DDX39A-214ENST00000590556 SLFN5Q08AF3 891 aa24.78■■□□□ 1.56
DDX39A-214ENST00000590556 CDCA7LQ96GN5 454 aa24.78■■□□□ 1.56
DDX39A-214ENST00000590556 ZBTB1Q9Y2K1 713 aa24.78■■□□□ 1.56
DDX39A-214ENST00000590556 UBR3Q6ZT12 1888 aa24.78■■□□□ 1.56
DDX39A-214ENST00000590556 ELL2O00472 640 aaPredicted RBP24.77■■□□□ 1.56
DDX39A-214ENST00000590556 PHF14O94880 888 aa24.77■■□□□ 1.56
DDX39A-214ENST00000590556 FLAD1Q8NFF5 587 aa24.77■■□□□ 1.56
DDX39A-214ENST00000590556 PNPLA7Q6ZV29 1317 aa24.77■■□□□ 1.56
DDX39A-214ENST00000590556 QSER1Q2KHR3 1735 aa24.76■■□□□ 1.55
DDX39A-214ENST00000590556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.76■■□□□ 1.55
DDX39A-214ENST00000590556 SSFA2P28290 1259 aa24.76■■□□□ 1.55
DDX39A-214ENST00000590556 SMIM5Q71RC9 77 aa24.76■■□□□ 1.55
DDX39A-214ENST00000590556 AMIGO3Q86WK7 504 aa24.76■■□□□ 1.55
DDX39A-214ENST00000590556 ZBED9Q6R2W3 1325 aa24.76■■□□□ 1.55
DDX39A-214ENST00000590556 TRAPPC3LQ5T215 181 aa24.75■■□□□ 1.55
DDX39A-214ENST00000590556 MSH5O43196 834 aa24.74■■□□□ 1.55
DDX39A-214ENST00000590556 EXOSC9Q06265 439 aaKnown RBP24.74■■□□□ 1.55
DDX39A-214ENST00000590556 COL23A1Q86Y22 540 aaPredicted RBP24.74■■□□□ 1.55
DDX39A-214ENST00000590556 TSPYL6Q8N831 410 aa24.74■■□□□ 1.55
DDX39A-214ENST00000590556 NECTIN2Q92692 538 aa24.74■■□□□ 1.55
DDX39A-214ENST00000590556 SOS1Q07889 1333 aaPredicted RBP24.74■■□□□ 1.55
DDX39A-214ENST00000590556 ADRA2BP18089 450 aa24.73■■□□□ 1.55
DDX39A-214ENST00000590556 PIP4K2AP48426 406 aaPredicted RBP24.73■■□□□ 1.55
DDX39A-214ENST00000590556 TWISTNBQ3B726 338 aaPredicted RBP24.73■■□□□ 1.55
DDX39A-214ENST00000590556 HDGFL1Q5TGJ6 251 aa24.73■■□□□ 1.55
DDX39A-214ENST00000590556 NBPF26B4DH59 902 aa24.72■■□□□ 1.55
DDX39A-214ENST00000590556 IL6STP40189 918 aaPredicted RBP24.72■■□□□ 1.55
DDX39A-214ENST00000590556 NBPF10Q6P3W6 841 aaKnown RBP24.72■■□□□ 1.55
DDX39A-214ENST00000590556 TRMT2AQ8IZ69 625 aaKnown RBP24.72■■□□□ 1.55
DDX39A-214ENST00000590556 NBPF15Q8N660 670 aa24.72■■□□□ 1.55
DDX39A-214ENST00000590556 ZNF330Q9Y3S2 320 aaPredicted RBP24.72■■□□□ 1.55
DDX39A-214ENST00000590556 ERBB4Q15303 1308 aa24.71■■□□□ 1.55
DDX39A-214ENST00000590556 EIF5P55010 431 aaKnown RBP24.71■■□□□ 1.55
DDX39A-214ENST00000590556 NPM2Q86SE8 214 aaKnown RBP24.71■■□□□ 1.55
DDX39A-214ENST00000590556 ARHGEF1Q92888 912 aaKnown RBP24.71■■□□□ 1.55
DDX39A-214ENST00000590556 CHMP4AQ9BY43 222 aa24.71■■□□□ 1.55
DDX39A-214ENST00000590556 PDGFDQ9GZP0 370 aaPredicted RBP24.71■■□□□ 1.55
DDX39A-214ENST00000590556 COL15A1P39059 1388 aa24.69■■□□□ 1.54
DDX39A-214ENST00000590556 A0A087WZG4 1122 aa24.69■■□□□ 1.54
DDX39A-214ENST00000590556 MYL6BP14649 208 aa24.69■■□□□ 1.54
DDX39A-214ENST00000590556 RFC4P35249 363 aa24.69■■□□□ 1.54
DDX39A-214ENST00000590556 CASZ1Q86V15 1759 aa24.68■■□□□ 1.54
DDX39A-214ENST00000590556 VAMP4O75379 141 aa24.67■■□□□ 1.54
DDX39A-214ENST00000590556 PDIA6Q15084 440 aa24.67■■□□□ 1.54
DDX39A-214ENST00000590556 CCDC30Q5VVM6 783 aa24.67■■□□□ 1.54
DDX39A-214ENST00000590556 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
DDX39A-214ENST00000590556 ARXQ96QS3 562 aa24.67■■□□□ 1.54
DDX39A-214ENST00000590556 CHPF2Q9P2E5 772 aa24.67■■□□□ 1.54
DDX39A-214ENST00000590556 SLC16A10Q8TF71 515 aa24.66■■□□□ 1.54
DDX39A-214ENST00000590556 DDX21Q9NR30 783 aaKnown RBP eCLIP24.66■■□□□ 1.54
DDX39A-214ENST00000590556 DBF4Q9UBU7 674 aaPredicted RBP24.66■■□□□ 1.54
DDX39A-214ENST00000590556 ZPR1O75312 459 aa24.65■■□□□ 1.54
DDX39A-214ENST00000590556 ANXA1P04083 346 aa24.65■■□□□ 1.54
DDX39A-214ENST00000590556 PROSER3Q2NL68 480 aa24.65■■□□□ 1.54
DDX39A-214ENST00000590556 C4AP0C0L4 1744 aa24.64■■□□□ 1.54
DDX39A-214ENST00000590556 ZBTB7AO95365 584 aa24.64■■□□□ 1.54
DDX39A-214ENST00000590556 SRP68Q9UHB9 627 aaKnown RBP24.64■■□□□ 1.54
DDX39A-214ENST00000590556 TBC1D2BQ9UPU7 963 aa24.64■■□□□ 1.54
DDX39A-214ENST00000590556 DZIP3Q86Y13 1208 aaKnown RBP24.63■■□□□ 1.53
DDX39A-214ENST00000590556 NARFQ9UHQ1 456 aa24.63■■□□□ 1.53
DDX39A-214ENST00000590556 USP42Q9H9J4 1324 aaKnown RBP24.62■■□□□ 1.53
DDX39A-214ENST00000590556 STK31Q9BXU1 1019 aa24.62■■□□□ 1.53
DDX39A-214ENST00000590556 HYPKQ9NX55 129 aa24.62■■□□□ 1.53
DDX39A-214ENST00000590556 TCERG1O14776 1098 aaKnown RBP24.61■■□□□ 1.53
DDX39A-214ENST00000590556 USPL1Q5W0Q7 1092 aa24.61■■□□□ 1.53
DDX39A-214ENST00000590556 LRP10Q7Z4F1 713 aa24.61■■□□□ 1.53
DDX39A-214ENST00000590556 MTFR1LQ9H019 292 aa24.61■■□□□ 1.53
DDX39A-214ENST00000590556 ATF5Q9Y2D1 282 aaPredicted RBP24.6■■□□□ 1.53
DDX39A-214ENST00000590556 GYS1P13807 737 aa24.59■■□□□ 1.53
DDX39A-214ENST00000590556 MSL1Q68DK7 614 aa24.59■■□□□ 1.53
DDX39A-214ENST00000590556 KIF6Q6ZMV9 814 aa24.59■■□□□ 1.53
DDX39A-214ENST00000590556 XAGE3Q8WTP9 111 aa24.59■■□□□ 1.53
DDX39A-214ENST00000590556 CT47B1P0C2W7 299 aaPredicted RBP24.58■■□□□ 1.53
DDX39A-214ENST00000590556 AIMP1Q12904 312 aaKnown RBP24.58■■□□□ 1.53
DDX39A-214ENST00000590556 TTLL7Q6ZT98 887 aa24.58■■□□□ 1.53
DDX39A-214ENST00000590556 COPS6Q7L5N1 327 aa24.58■■□□□ 1.53
DDX39A-214ENST00000590556 NLGN1Q8N2Q7 840 aa24.58■■□□□ 1.53
DDX39A-214ENST00000590556 CAMTA2O94983 1202 aa24.57■■□□□ 1.52
DDX39A-214ENST00000590556 SLC4A2P04920 1241 aa24.57■■□□□ 1.52
DDX39A-214ENST00000590556 SPON1Q9HCB6 807 aa24.57■■□□□ 1.52
DDX39A-214ENST00000590556 CACNA1FO60840 1977 aa24.55■■□□□ 1.52
DDX39A-214ENST00000590556 FKBP8Q14318 412 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms