RNA–Protein interactions for RNA: ENST00000590379.5

SPHK1-206, Transcript of sphingosine kinase 1, humanhuman

TSL 3

Gene SPHK1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-206ENST00000590379 COL24A1Q17RW2 1714 aa27.57■■■□□ 2
SPHK1-206ENST00000590379 KDM3BQ7LBC6 1761 aa27.57■■■□□ 2
SPHK1-206ENST00000590379 SYT17Q9BSW7 474 aa27.56■■■□□ 2
SPHK1-206ENST00000590379 APAF1O14727 1248 aa27.55■■■□□ 2
SPHK1-206ENST00000590379 INTS5Q6P9B9 1019 aaKnown RBP27.55■■■□□ 2
SPHK1-206ENST00000590379 RFC4P35249 363 aa27.54■■■□□ 2
SPHK1-206ENST00000590379 ARHGEF1Q92888 912 aaKnown RBP27.53■■■□□ 2
SPHK1-206ENST00000590379 TRIM35Q9UPQ4 493 aa27.53■■■□□ 2
SPHK1-206ENST00000590379 C4AP0C0L4 1744 aa27.53■■■□□ 2
SPHK1-206ENST00000590379 SNRPA1P09661 255 aaKnown RBP27.52■■■□□ 2
SPHK1-206ENST00000590379 KLHL34Q8N239 644 aa27.52■■■□□ 2
SPHK1-206ENST00000590379 TSPYL4Q9UJ04 414 aa27.51■■□□□ 1.99
SPHK1-206ENST00000590379 ZBTB1Q9Y2K1 713 aa27.51■■□□□ 1.99
SPHK1-206ENST00000590379 DCAF8L1A6NGE4 600 aa27.5■■□□□ 1.99
SPHK1-206ENST00000590379 CANXP27824 592 aaKnown RBP27.49■■□□□ 1.99
SPHK1-206ENST00000590379 BABAM1Q9NWV8 329 aa27.49■■□□□ 1.99
SPHK1-206ENST00000590379 SOS1Q07889 1333 aaPredicted RBP27.48■■□□□ 1.99
SPHK1-206ENST00000590379 FAM9BQ8IZU0 186 aa27.47■■□□□ 1.99
SPHK1-206ENST00000590379 LAS1LQ9Y4W2 734 aaKnown RBP27.47■■□□□ 1.99
SPHK1-206ENST00000590379 LAMB4A4D0S4 1761 aa27.47■■□□□ 1.99
SPHK1-206ENST00000590379 COL15A1P39059 1388 aa27.47■■□□□ 1.99
SPHK1-206ENST00000590379 EIF4A1P60842 406 aaKnown RBP27.46■■□□□ 1.99
SPHK1-206ENST00000590379 USP16Q9Y5T5 823 aa27.46■■□□□ 1.99
SPHK1-206ENST00000590379 PRAMEF22A3QJZ6 481 aa27.45■■□□□ 1.98
SPHK1-206ENST00000590379 NPM2Q86SE8 214 aaKnown RBP27.45■■□□□ 1.98
SPHK1-206ENST00000590379 ZPR1O75312 459 aa27.44■■□□□ 1.98
SPHK1-206ENST00000590379 CALD1Q05682 793 aaKnown RBP27.44■■□□□ 1.98
SPHK1-206ENST00000590379 NLGN1Q8N2Q7 840 aa27.44■■□□□ 1.98
SPHK1-206ENST00000590379 ZNF330Q9Y3S2 320 aaPredicted RBP27.44■■□□□ 1.98
SPHK1-206ENST00000590379 USP42Q9H9J4 1324 aaKnown RBP27.43■■□□□ 1.98
SPHK1-206ENST00000590379 A1BGP04217 495 aa27.43■■□□□ 1.98
SPHK1-206ENST00000590379 A0A087WZG4 1122 aa27.42■■□□□ 1.98
SPHK1-206ENST00000590379 GIGYF1O75420 1035 aaPredicted RBP27.42■■□□□ 1.98
SPHK1-206ENST00000590379 GYS1P13807 737 aa27.42■■□□□ 1.98
SPHK1-206ENST00000590379 IL6STP40189 918 aaPredicted RBP27.42■■□□□ 1.98
SPHK1-206ENST00000590379 SRP68Q9UHB9 627 aaKnown RBP27.42■■□□□ 1.98
SPHK1-206ENST00000590379 CHL1O00533 1208 aa27.41■■□□□ 1.98
SPHK1-206ENST00000590379 EIF5P55010 431 aaKnown RBP27.41■■□□□ 1.98
SPHK1-206ENST00000590379 DIEXFQ68CQ4 756 aaKnown RBP27.4■■□□□ 1.98
SPHK1-206ENST00000590379 SENP3-EIF4A1A0A087X0R7 540 aa27.39■■□□□ 1.98
SPHK1-206ENST00000590379 NLGN2Q8NFZ4 835 aa27.39■■□□□ 1.98
SPHK1-206ENST00000590379 CFAP44Q96MT7 982 aa27.39■■□□□ 1.98
SPHK1-206ENST00000590379 NARFQ9UHQ1 456 aa27.39■■□□□ 1.98
SPHK1-206ENST00000590379 MMP10P09238 476 aa27.38■■□□□ 1.97
SPHK1-206ENST00000590379 USPL1Q5W0Q7 1092 aa27.38■■□□□ 1.97
SPHK1-206ENST00000590379 PIP4K2AP48426 406 aaPredicted RBP27.37■■□□□ 1.97
SPHK1-206ENST00000590379 GNAI1P63096 354 aa27.36■■□□□ 1.97
SPHK1-206ENST00000590379 CCDC27Q2M243 656 aa27.36■■□□□ 1.97
SPHK1-206ENST00000590379 IFT57Q9NWB7 429 aa27.36■■□□□ 1.97
SPHK1-206ENST00000590379 UTRNP46939 3433 aa27.36■■□□□ 1.97
SPHK1-206ENST00000590379 CCER2I3L3R5 266 aa27.35■■□□□ 1.97
SPHK1-206ENST00000590379 FKBP8Q14318 412 aa27.35■■□□□ 1.97
SPHK1-206ENST00000590379 NCBP3Q53F19 620 aaKnown RBP27.34■■□□□ 1.97
SPHK1-206ENST00000590379 TBC1D2BQ9UPU7 963 aa27.34■■□□□ 1.97
SPHK1-206ENST00000590379 PARP3Q9Y6F1 533 aa27.34■■□□□ 1.97
SPHK1-206ENST00000590379 GPR162Q16538 588 aa27.33■■□□□ 1.97
SPHK1-206ENST00000590379 MBIPQ9NS73 344 aa27.33■■□□□ 1.97
SPHK1-206ENST00000590379 CD2APQ9Y5K6 639 aa27.33■■□□□ 1.97
SPHK1-206ENST00000590379 ZNF853P0CG23 659 aa27.32■■□□□ 1.96
SPHK1-206ENST00000590379 DZIP3Q86Y13 1208 aaKnown RBP27.32■■□□□ 1.96
SPHK1-206ENST00000590379 WWC1Q8IX03 1113 aa27.32■■□□□ 1.96
SPHK1-206ENST00000590379 PELP1Q8IZL8 1130 aaKnown RBP27.32■■□□□ 1.96
SPHK1-206ENST00000590379 SALL2Q9Y467 1007 aaPredicted RBP27.32■■□□□ 1.96
SPHK1-206ENST00000590379 SCN7AQ01118 1682 aa27.32■■□□□ 1.96
SPHK1-206ENST00000590379 NBPF26B4DH59 902 aa27.31■■□□□ 1.96
SPHK1-206ENST00000590379 EIF2S2P20042 333 aaKnown RBP27.31■■□□□ 1.96
SPHK1-206ENST00000590379 NBPF10Q6P3W6 841 aaKnown RBP27.31■■□□□ 1.96
SPHK1-206ENST00000590379 NBPF15Q8N660 670 aa27.31■■□□□ 1.96
SPHK1-206ENST00000590379 BCORQ6W2J9 1755 aa27.3■■□□□ 1.96
SPHK1-206ENST00000590379 ERBB4Q15303 1308 aa27.29■■□□□ 1.96
SPHK1-206ENST00000590379 YY1P25490 414 aa27.28■■□□□ 1.96
SPHK1-206ENST00000590379 KRT24Q2M2I5 525 aa27.28■■□□□ 1.96
SPHK1-206ENST00000590379 NGEFQ8N5V2 710 aa27.28■■□□□ 1.96
SPHK1-206ENST00000590379 BCL2L12Q9HB09 334 aa27.28■■□□□ 1.96
SPHK1-206ENST00000590379 GOLGB1Q14789 3259 aaKnown RBP27.28■■□□□ 1.96
SPHK1-206ENST00000590379 MYL6BP14649 208 aa27.27■■□□□ 1.96
SPHK1-206ENST00000590379 CAMTA2O94983 1202 aa27.26■■□□□ 1.95
SPHK1-206ENST00000590379 HOXB7P09629 217 aa27.26■■□□□ 1.95
SPHK1-206ENST00000590379 TM4SF1P30408 202 aa27.26■■□□□ 1.95
SPHK1-206ENST00000590379 IL16Q14005 1332 aa27.25■■□□□ 1.95
SPHK1-206ENST00000590379 DDR1Q08345 913 aa27.25■■□□□ 1.95
SPHK1-206ENST00000590379 NFIXQ14938 502 aa27.25■■□□□ 1.95
SPHK1-206ENST00000590379 BICDL1Q6ZP65 573 aa27.25■■□□□ 1.95
SPHK1-206ENST00000590379 NECTIN2Q92692 538 aa27.25■■□□□ 1.95
SPHK1-206ENST00000590379 POLRMTO00411 1230 aaKnown RBP27.24■■□□□ 1.95
SPHK1-206ENST00000590379 DUSP27Q5VZP5 1158 aa27.24■■□□□ 1.95
SPHK1-206ENST00000590379 ZNF652Q9Y2D9 606 aa27.24■■□□□ 1.95
SPHK1-206ENST00000590379 KIF13BQ9NQT8 1826 aa27.24■■□□□ 1.95
SPHK1-206ENST00000590379 AFDNP55196 1824 aaKnown RBP27.23■■□□□ 1.95
SPHK1-206ENST00000590379 HDGFL1Q5TGJ6 251 aa27.23■■□□□ 1.95
SPHK1-206ENST00000590379 WDR63Q8IWG1 891 aa27.23■■□□□ 1.95
SPHK1-206ENST00000590379 TBC1D9BQ66K14 1250 aa27.22■■□□□ 1.95
SPHK1-206ENST00000590379 KIF6Q6ZMV9 814 aa27.22■■□□□ 1.95
SPHK1-206ENST00000590379 MIER1Q8N108 512 aa27.22■■□□□ 1.95
SPHK1-206ENST00000590379 CLEC4GQ6UXB4 293 aa27.21■■□□□ 1.95
SPHK1-206ENST00000590379 TSR2Q969E8 191 aaKnown RBP27.21■■□□□ 1.95
SPHK1-206ENST00000590379 C10orf71Q711Q0 1435 aa27.21■■□□□ 1.95
SPHK1-206ENST00000590379 YBX3P16989 372 aaKnown RBP eCLIP27.2■■□□□ 1.94
SPHK1-206ENST00000590379 RGL2O15211 777 aa27.19■■□□□ 1.94
SPHK1-206ENST00000590379 SERPINB2P05120 415 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms