RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 PHF14O94880 888 aa16.65■□□□□ 0.26
DDX39A-213ENST00000590315 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
DDX39A-213ENST00000590315 CRKLP46109 303 aaKnown RBP16.65■□□□□ 0.26
DDX39A-213ENST00000590315 ZNF827Q17R98 1081 aa16.65■□□□□ 0.26
DDX39A-213ENST00000590315 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
DDX39A-213ENST00000590315 TFCP2L1Q9NZI6 479 aa16.65■□□□□ 0.26
DDX39A-213ENST00000590315 CACNA1FO60840 1977 aa16.65■□□□□ 0.26
DDX39A-213ENST00000590315 ZNF521Q96K83 1311 aa16.65■□□□□ 0.26
DDX39A-213ENST00000590315 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-213ENST00000590315 E9PSI1 815 aa16.64■□□□□ 0.25
DDX39A-213ENST00000590315 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
DDX39A-213ENST00000590315 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
DDX39A-213ENST00000590315 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-213ENST00000590315 CYP19A1P11511 503 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-213ENST00000590315 CANXP27824 592 aaKnown RBP16.63■□□□□ 0.25
DDX39A-213ENST00000590315 R3HDM1Q15032 1099 aaKnown RBP16.63■□□□□ 0.25
DDX39A-213ENST00000590315 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
DDX39A-213ENST00000590315 DUSP27Q5VZP5 1158 aa16.63■□□□□ 0.25
DDX39A-213ENST00000590315 NPM2Q86SE8 214 aaKnown RBP16.63■□□□□ 0.25
DDX39A-213ENST00000590315 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
DDX39A-213ENST00000590315 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-213ENST00000590315 USP16Q9Y5T5 823 aa16.63■□□□□ 0.25
DDX39A-213ENST00000590315 CNTNAP4Q9C0A0 1308 aa16.63■□□□□ 0.25
DDX39A-213ENST00000590315 CASZ1Q86V15 1759 aa16.62■□□□□ 0.25
DDX39A-213ENST00000590315 PIP4K2AP48426 406 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-213ENST00000590315 ARXQ96QS3 562 aa16.62■□□□□ 0.25
DDX39A-213ENST00000590315 RTCBQ9Y3I0 505 aaKnown RBP16.62■□□□□ 0.25
DDX39A-213ENST00000590315 EXOSC9Q06265 439 aaKnown RBP16.61■□□□□ 0.25
DDX39A-213ENST00000590315 HDGFL1Q5TGJ6 251 aa16.61■□□□□ 0.25
DDX39A-213ENST00000590315 AKT1S1Q96B36 256 aa16.61■□□□□ 0.25
DDX39A-213ENST00000590315 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
DDX39A-213ENST00000590315 BCORQ6W2J9 1755 aa16.61■□□□□ 0.25
DDX39A-213ENST00000590315 A1BGP04217 495 aa16.6■□□□□ 0.25
DDX39A-213ENST00000590315 SLFN5Q08AF3 891 aa16.6■□□□□ 0.25
DDX39A-213ENST00000590315 TWISTNBQ3B726 338 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-213ENST00000590315 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
DDX39A-213ENST00000590315 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
DDX39A-213ENST00000590315 MYL6BP14649 208 aa16.59■□□□□ 0.25
DDX39A-213ENST00000590315 RC3H1Q5TC82 1133 aaKnown RBP16.59■□□□□ 0.25
DDX39A-213ENST00000590315 SMIM5Q71RC9 77 aa16.59■□□□□ 0.25
DDX39A-213ENST00000590315 COL15A1P39059 1388 aa16.59■□□□□ 0.25
DDX39A-213ENST00000590315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.24
DDX39A-213ENST00000590315 INTS5Q6P9B9 1019 aaKnown RBP16.58■□□□□ 0.24
DDX39A-213ENST00000590315 TSPYL6Q8N831 410 aa16.58■□□□□ 0.24
DDX39A-213ENST00000590315 NUP98P52948 1817 aa16.58■□□□□ 0.24
DDX39A-213ENST00000590315 PNPLA7Q6ZV29 1317 aa16.57■□□□□ 0.24
DDX39A-213ENST00000590315 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
DDX39A-213ENST00000590315 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
DDX39A-213ENST00000590315 HOXB7P09629 217 aa16.57■□□□□ 0.24
DDX39A-213ENST00000590315 SSFA2P28290 1259 aa16.57■□□□□ 0.24
DDX39A-213ENST00000590315 ANKRD36CQ5JPF3 1778 aa16.56■□□□□ 0.24
DDX39A-213ENST00000590315 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
DDX39A-213ENST00000590315 SOS1Q07889 1333 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-213ENST00000590315 ANXA1P04083 346 aa16.56■□□□□ 0.24
DDX39A-213ENST00000590315 RFC4P35249 363 aa16.56■□□□□ 0.24
DDX39A-213ENST00000590315 TRAPPC3LQ5T215 181 aa16.56■□□□□ 0.24
DDX39A-213ENST00000590315 FLAD1Q8NFF5 587 aa16.56■□□□□ 0.24
DDX39A-213ENST00000590315 STK31Q9BXU1 1019 aa16.56■□□□□ 0.24
DDX39A-213ENST00000590315 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
DDX39A-213ENST00000590315 AFDNP55196 1824 aaKnown RBP16.55■□□□□ 0.24
DDX39A-213ENST00000590315 CCDC30Q5VVM6 783 aa16.55■□□□□ 0.24
DDX39A-213ENST00000590315 CHMP4AQ9BY43 222 aa16.55■□□□□ 0.24
DDX39A-213ENST00000590315 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
DDX39A-213ENST00000590315 IL6STP40189 918 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-213ENST00000590315 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
DDX39A-213ENST00000590315 COL23A1Q86Y22 540 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-213ENST00000590315 A0A087WZG4 1122 aa16.53■□□□□ 0.24
DDX39A-213ENST00000590315 NBPF26B4DH59 902 aa16.53■□□□□ 0.24
DDX39A-213ENST00000590315 ZPR1O75312 459 aa16.53■□□□□ 0.24
DDX39A-213ENST00000590315 ADRA2BP18089 450 aa16.53■□□□□ 0.24
DDX39A-213ENST00000590315 NBPF10Q6P3W6 841 aaKnown RBP16.53■□□□□ 0.24
DDX39A-213ENST00000590315 KIF6Q6ZMV9 814 aa16.53■□□□□ 0.24
DDX39A-213ENST00000590315 NBPF15Q8N660 670 aa16.53■□□□□ 0.24
DDX39A-213ENST00000590315 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
DDX39A-213ENST00000590315 PROSER3Q2NL68 480 aa16.52■□□□□ 0.24
DDX39A-213ENST00000590315 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
DDX39A-213ENST00000590315 DZIP3Q86Y13 1208 aaKnown RBP16.52■□□□□ 0.24
DDX39A-213ENST00000590315 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.24
DDX39A-213ENST00000590315 PDGFDQ9GZP0 370 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-213ENST00000590315 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-213ENST00000590315 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
DDX39A-213ENST00000590315 ZBTB7AO95365 584 aa16.51■□□□□ 0.23
DDX39A-213ENST00000590315 EIF5P55010 431 aaKnown RBP16.51■□□□□ 0.23
DDX39A-213ENST00000590315 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
DDX39A-213ENST00000590315 SRP68Q9UHB9 627 aaKnown RBP16.51■□□□□ 0.23
DDX39A-213ENST00000590315 VAMP4O75379 141 aa16.5■□□□□ 0.23
DDX39A-213ENST00000590315 USPL1Q5W0Q7 1092 aa16.5■□□□□ 0.23
DDX39A-213ENST00000590315 TRMT2AQ8IZ69 625 aaKnown RBP16.5■□□□□ 0.23
DDX39A-213ENST00000590315 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
DDX39A-213ENST00000590315 ZBTB3Q9H5J0 574 aa16.49■□□□□ 0.23
DDX39A-213ENST00000590315 HYPKQ9NX55 129 aa16.49■□□□□ 0.23
DDX39A-213ENST00000590315 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
DDX39A-213ENST00000590315 COL24A1Q17RW2 1714 aa16.48■□□□□ 0.23
DDX39A-213ENST00000590315 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
DDX39A-213ENST00000590315 BCL2L13Q9BXK5 485 aa16.48■□□□□ 0.23
DDX39A-213ENST00000590315 NARFQ9UHQ1 456 aa16.48■□□□□ 0.23
DDX39A-213ENST00000590315 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-213ENST00000590315 PDIA6Q15084 440 aa16.47■□□□□ 0.23
DDX39A-213ENST00000590315 TTLL7Q6ZT98 887 aa16.47■□□□□ 0.23
DDX39A-213ENST00000590315 COPS6Q7L5N1 327 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms