RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SMG6Q86US8 1419 aaKnown RBP9.68□□□□□ -0.86
SMAD4-210ENST00000590061 FLT4P35916 1363 aa9.68□□□□□ -0.86
SMAD4-210ENST00000590061 GCP02774 474 aa9.68□□□□□ -0.86
SMAD4-210ENST00000590061 CENPBP07199 599 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-210ENST00000590061 TNNT2P45379 298 aaPredicted RBP9.68□□□□□ -0.86
SMAD4-210ENST00000590061 POLKQ9UBT6 870 aa9.68□□□□□ -0.86
SMAD4-210ENST00000590061 ABCC6O95255 1503 aa9.67□□□□□ -0.86
SMAD4-210ENST00000590061 PXDNQ92626 1479 aa9.67□□□□□ -0.86
SMAD4-210ENST00000590061 PPM1GO15355 546 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-210ENST00000590061 DNAJB2P25686 324 aa9.67□□□□□ -0.86
SMAD4-210ENST00000590061 APLP1P51693 650 aa9.67□□□□□ -0.86
SMAD4-210ENST00000590061 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
SMAD4-210ENST00000590061 TMEM134Q9H6X4 195 aa9.67□□□□□ -0.86
SMAD4-210ENST00000590061 AHDC1Q5TGY3 1603 aaPredicted RBP9.67□□□□□ -0.86
SMAD4-210ENST00000590061 CPDO75976 1380 aa9.66□□□□□ -0.86
SMAD4-210ENST00000590061 FECHP22830 423 aa9.66□□□□□ -0.86
SMAD4-210ENST00000590061 RBM46Q8TBY0 533 aaKnown RBP9.66□□□□□ -0.86
SMAD4-210ENST00000590061 IP6K1Q92551 441 aa9.66□□□□□ -0.86
SMAD4-210ENST00000590061 MAP2P11137 1827 aaKnown RBP9.66□□□□□ -0.86
SMAD4-210ENST00000590061 BLMP54132 1417 aaPredicted RBP9.65□□□□□ -0.86
SMAD4-210ENST00000590061 PLEKHG2Q9H7P9 1386 aa9.65□□□□□ -0.86
SMAD4-210ENST00000590061 NHSL1Q5SYE7 1610 aa9.65□□□□□ -0.86
SMAD4-210ENST00000590061 RCCD1A6NED2 376 aa9.65□□□□□ -0.86
SMAD4-210ENST00000590061 GNPATO15228 680 aa9.65□□□□□ -0.86
SMAD4-210ENST00000590061 SLF2Q8IX21 1173 aa9.65□□□□□ -0.86
SMAD4-210ENST00000590061 FAM9BQ8IZU0 186 aa9.65□□□□□ -0.86
SMAD4-210ENST00000590061 PXYLP1Q8TE99 480 aa9.65□□□□□ -0.86
SMAD4-210ENST00000590061 TRPM3Q9HCF6 1732 aaPredicted RBP9.65□□□□□ -0.87
SMAD4-210ENST00000590061 PIK3C2AO00443 1686 aa9.64□□□□□ -0.87
SMAD4-210ENST00000590061 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-210ENST00000590061 U2AF1L5P0DN76 240 aaPredicted RBP9.64□□□□□ -0.87
SMAD4-210ENST00000590061 U2AF1Q01081 240 aaKnown RBP eCLIP9.64□□□□□ -0.87
SMAD4-210ENST00000590061 KCNC4Q03721 635 aa9.64□□□□□ -0.87
SMAD4-210ENST00000590061 ARHGEF25Q86VW2 580 aa9.64□□□□□ -0.87
SMAD4-210ENST00000590061 SLIT3O75094 1523 aa9.64□□□□□ -0.87
SMAD4-210ENST00000590061 ALS2Q96Q42 1657 aa9.64□□□□□ -0.87
SMAD4-210ENST00000590061 ROBO1Q9Y6N7 1651 aa9.64□□□□□ -0.87
SMAD4-210ENST00000590061 MAP3K19Q56UN5 1328 aa9.63□□□□□ -0.87
SMAD4-210ENST00000590061 MAPK8IP3Q9UPT6 1336 aa9.63□□□□□ -0.87
SMAD4-210ENST00000590061 RNF40O75150 1001 aa9.63□□□□□ -0.87
SMAD4-210ENST00000590061 XPCQ01831 940 aaPredicted RBP9.63□□□□□ -0.87
SMAD4-210ENST00000590061 CALD1Q05682 793 aaKnown RBP9.63□□□□□ -0.87
SMAD4-210ENST00000590061 LMOD3Q0VAK6 560 aa9.63□□□□□ -0.87
SMAD4-210ENST00000590061 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
SMAD4-210ENST00000590061 METTL3Q86U44 580 aaKnown RBP9.63□□□□□ -0.87
SMAD4-210ENST00000590061 RUNDC1Q96C34 613 aa9.63□□□□□ -0.87
SMAD4-210ENST00000590061 JCADQ9P266 1359 aa9.63□□□□□ -0.87
SMAD4-210ENST00000590061 SPATA31A6Q5VVP1 1343 aa9.62□□□□□ -0.87
SMAD4-210ENST00000590061 U2SURPO15042 1029 aaKnown RBP9.62□□□□□ -0.87
SMAD4-210ENST00000590061 RGS20O76081 388 aa9.62□□□□□ -0.87
SMAD4-210ENST00000590061 HOXC9P31274 260 aa9.62□□□□□ -0.87
SMAD4-210ENST00000590061 NUTM2GQ5VZR2 741 aa9.62□□□□□ -0.87
SMAD4-210ENST00000590061 MTRQ99707 1265 aa9.62□□□□□ -0.87
SMAD4-210ENST00000590061 PHRF1Q9P1Y6 1649 aaKnown RBP9.62□□□□□ -0.87
SMAD4-210ENST00000590061 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.61□□□□□ -0.87
SMAD4-210ENST00000590061 IL13P35225 146 aa9.61□□□□□ -0.87
SMAD4-210ENST00000590061 RRS1Q15050 365 aaKnown RBP9.61□□□□□ -0.87
SMAD4-210ENST00000590061 GPIHBP1Q8IV16 184 aa9.61□□□□□ -0.87
SMAD4-210ENST00000590061 PRDM11Q9NQV5 511 aa9.61□□□□□ -0.87
SMAD4-210ENST00000590061 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
SMAD4-210ENST00000590061 EMILIN1Q9Y6C2 1016 aa9.61□□□□□ -0.87
SMAD4-210ENST00000590061 HNRNPUQ00839 825 aaKnown RBP eCLIP9.6□□□□□ -0.87
SMAD4-210ENST00000590061 NECTIN2Q92692 538 aa9.6□□□□□ -0.87
SMAD4-210ENST00000590061 NFAT5O94916 1531 aa9.6□□□□□ -0.87
SMAD4-210ENST00000590061 PHLPP1O60346 1717 aa9.59□□□□□ -0.87
SMAD4-210ENST00000590061 ZBED9Q6R2W3 1325 aa9.59□□□□□ -0.87
SMAD4-210ENST00000590061 OATP04181 439 aa9.59□□□□□ -0.87
SMAD4-210ENST00000590061 EVA1CP58658 441 aa9.59□□□□□ -0.87
SMAD4-210ENST00000590061 CCDC27Q2M243 656 aa9.59□□□□□ -0.87
SMAD4-210ENST00000590061 AMOTQ4VCS5 1084 aa9.59□□□□□ -0.87
SMAD4-210ENST00000590061 RGS17Q9UGC6 210 aaPredicted RBP9.59□□□□□ -0.87
SMAD4-210ENST00000590061 COL22A1Q8NFW1 1626 aaPredicted RBP9.58□□□□□ -0.88
SMAD4-210ENST00000590061 EIF4A2Q14240 407 aaKnown RBP9.58□□□□□ -0.88
SMAD4-210ENST00000590061 HSP90AB2PQ58FF8 381 aa9.58□□□□□ -0.88
SMAD4-210ENST00000590061 GAS2L2Q8NHY3 880 aa9.58□□□□□ -0.88
SMAD4-210ENST00000590061 DDX17Q92841 729 aaKnown RBP9.58□□□□□ -0.88
SMAD4-210ENST00000590061 CDCA7Q9BWT1 371 aaPredicted RBP9.58□□□□□ -0.88
SMAD4-210ENST00000590061 IL21Q9HBE4 155 aa9.58□□□□□ -0.88
SMAD4-210ENST00000590061 HTATSF1O43719 755 aaKnown RBP9.57□□□□□ -0.88
SMAD4-210ENST00000590061 SLC10A3P09131 477 aa9.57□□□□□ -0.88
SMAD4-210ENST00000590061 CSB-PGBD3P0DP91 1061 aa9.57□□□□□ -0.88
SMAD4-210ENST00000590061 ZC3H6P61129 1189 aaKnown RBP9.57□□□□□ -0.88
SMAD4-210ENST00000590061 TPRNQ4KMQ1 711 aa9.57□□□□□ -0.88
SMAD4-210ENST00000590061 CCDC184Q52MB2 194 aa9.57□□□□□ -0.88
SMAD4-210ENST00000590061 CHMP4AQ9BY43 222 aa9.57□□□□□ -0.88
SMAD4-210ENST00000590061 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
SMAD4-210ENST00000590061 COL3A1P02461 1466 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-210ENST00000590061 IGSF1Q8N6C5 1336 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 LTN1O94822 1766 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 FAM208AQ9UK61 1670 aaKnown RBP9.56□□□□□ -0.88
SMAD4-210ENST00000590061 KDRP35968 1356 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 PLEKHO1Q53GL0 409 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-210ENST00000590061 SULT6B1Q6IMI4 303 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 WDR63Q8IWG1 891 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 ANKRD24Q8TF21 1146 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 RAPGEF4Q8WZA2 1011 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 ZNF516Q92618 1163 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 PHOX2BQ99453 314 aa9.56□□□□□ -0.88
SMAD4-210ENST00000590061 ZBTB7CA1YPR0 619 aa9.55□□□□□ -0.88
SMAD4-210ENST00000590061 TCP11L2Q8N4U5 519 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms