RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 C8orf58Q8NAV2 365 aa13.08□□□□□ -0.32
APOC1-205ENST00000589781 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.32
APOC1-205ENST00000589781 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
APOC1-205ENST00000589781 TAF1LQ8IZX4 1826 aa13.08□□□□□ -0.32
APOC1-205ENST00000589781 QSER1Q2KHR3 1735 aa13.08□□□□□ -0.32
APOC1-205ENST00000589781 CEMIPQ8WUJ3 1361 aa13.07□□□□□ -0.32
APOC1-205ENST00000589781 ELL2O00472 640 aaPredicted RBP13.07□□□□□ -0.32
APOC1-205ENST00000589781 RNMTO43148 476 aaKnown RBP13.07□□□□□ -0.32
APOC1-205ENST00000589781 TWISTNBQ3B726 338 aaPredicted RBP13.07□□□□□ -0.32
APOC1-205ENST00000589781 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
APOC1-205ENST00000589781 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
APOC1-205ENST00000589781 MTFR1LQ9H019 292 aa13.07□□□□□ -0.32
APOC1-205ENST00000589781 MIS18AQ9NYP9 233 aa13.07□□□□□ -0.32
APOC1-205ENST00000589781 TSPYL4Q9UJ04 414 aa13.07□□□□□ -0.32
APOC1-205ENST00000589781 C5P01031 1676 aa13.07□□□□□ -0.32
APOC1-205ENST00000589781 COL24A1Q17RW2 1714 aa13.07□□□□□ -0.32
APOC1-205ENST00000589781 MRC1P22897 1456 aa13.06□□□□□ -0.32
APOC1-205ENST00000589781 C4BP0C0L5 1744 aa13.06□□□□□ -0.32
APOC1-205ENST00000589781 VAMP4O75379 141 aa13.06□□□□□ -0.32
APOC1-205ENST00000589781 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
APOC1-205ENST00000589781 CABP4P57796 275 aa13.06□□□□□ -0.32
APOC1-205ENST00000589781 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
APOC1-205ENST00000589781 PANK1Q8TE04 598 aa13.06□□□□□ -0.32
APOC1-205ENST00000589781 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
APOC1-205ENST00000589781 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
APOC1-205ENST00000589781 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
APOC1-205ENST00000589781 CCDC136Q96JN2 1154 aa13.05□□□□□ -0.32
APOC1-205ENST00000589781 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
APOC1-205ENST00000589781 RLBP1P12271 317 aa13.04□□□□□ -0.32
APOC1-205ENST00000589781 ATP6V1AP38606 617 aa13.04□□□□□ -0.32
APOC1-205ENST00000589781 SLC39A6Q13433 755 aa13.04□□□□□ -0.32
APOC1-205ENST00000589781 PDE3AQ14432 1141 aa13.04□□□□□ -0.32
APOC1-205ENST00000589781 SLC52A2Q9HAB3 445 aa13.04□□□□□ -0.32
APOC1-205ENST00000589781 ZKSCAN2Q63HK3 967 aa13.03□□□□□ -0.32
APOC1-205ENST00000589781 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
APOC1-205ENST00000589781 SLC16A10Q8TF71 515 aa13.03□□□□□ -0.32
APOC1-205ENST00000589781 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
APOC1-205ENST00000589781 COG6Q9Y2V7 657 aa13.03□□□□□ -0.32
APOC1-205ENST00000589781 KCPQ6ZWJ8 1503 aa13.03□□□□□ -0.32
APOC1-205ENST00000589781 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.32
APOC1-205ENST00000589781 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.33
APOC1-205ENST00000589781 TRIM27P14373 513 aa13.02□□□□□ -0.33
APOC1-205ENST00000589781 MSL1Q68DK7 614 aa13.02□□□□□ -0.33
APOC1-205ENST00000589781 ZNF428Q96B54 188 aa13.02□□□□□ -0.33
APOC1-205ENST00000589781 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
APOC1-205ENST00000589781 FHDC1Q9C0D6 1143 aaPredicted RBP13.02□□□□□ -0.33
APOC1-205ENST00000589781 NOB1Q9ULX3 412 aaKnown RBP13.02□□□□□ -0.33
APOC1-205ENST00000589781 ZNF831Q5JPB2 1677 aa13.02□□□□□ -0.33
APOC1-205ENST00000589781 TJP1Q07157 1748 aa13.02□□□□□ -0.33
APOC1-205ENST00000589781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
APOC1-205ENST00000589781 TEFQ10587 303 aa13.01□□□□□ -0.33
APOC1-205ENST00000589781 TAF7Q15545 349 aaPredicted RBP13.01□□□□□ -0.33
APOC1-205ENST00000589781 FTSJ3Q8IY81 847 aaKnown RBP13.01□□□□□ -0.33
APOC1-205ENST00000589781 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
APOC1-205ENST00000589781 SYT17Q9BSW7 474 aa13.01□□□□□ -0.33
APOC1-205ENST00000589781 CACNA1FO60840 1977 aa13□□□□□ -0.33
APOC1-205ENST00000589781 N4BP2Q86UW6 1770 aaPredicted RBP13□□□□□ -0.33
APOC1-205ENST00000589781 COL5A3P25940 1745 aaPredicted RBP13□□□□□ -0.33
APOC1-205ENST00000589781 KCNQ3O43525 872 aa13□□□□□ -0.33
APOC1-205ENST00000589781 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
APOC1-205ENST00000589781 ARXQ96QS3 562 aa13□□□□□ -0.33
APOC1-205ENST00000589781 GNPATO15228 680 aa12.99□□□□□ -0.33
APOC1-205ENST00000589781 PHF14O94880 888 aa12.99□□□□□ -0.33
APOC1-205ENST00000589781 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
APOC1-205ENST00000589781 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
APOC1-205ENST00000589781 DNAJC10Q8IXB1 793 aa12.99□□□□□ -0.33
APOC1-205ENST00000589781 AK7Q96M32 723 aa12.99□□□□□ -0.33
APOC1-205ENST00000589781 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
APOC1-205ENST00000589781 PPP1R1BQ9UD71 204 aaPredicted RBP12.99□□□□□ -0.33
APOC1-205ENST00000589781 MYH14Q7Z406 1995 aaKnown RBP12.99□□□□□ -0.33
APOC1-205ENST00000589781 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
APOC1-205ENST00000589781 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
APOC1-205ENST00000589781 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
APOC1-205ENST00000589781 MVPQ14764 893 aaKnown RBP12.98□□□□□ -0.33
APOC1-205ENST00000589781 RC3H1Q5TC82 1133 aaKnown RBP12.98□□□□□ -0.33
APOC1-205ENST00000589781 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
APOC1-205ENST00000589781 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
APOC1-205ENST00000589781 IPO8O15397 1037 aaKnown RBP12.97□□□□□ -0.33
APOC1-205ENST00000589781 MSH5O43196 834 aa12.97□□□□□ -0.33
APOC1-205ENST00000589781 RPS6KA4O75676 772 aa12.97□□□□□ -0.33
APOC1-205ENST00000589781 MS4A1P11836 297 aa12.97□□□□□ -0.33
APOC1-205ENST00000589781 SSFA2P28290 1259 aa12.97□□□□□ -0.33
APOC1-205ENST00000589781 CRKLP46109 303 aaKnown RBP12.97□□□□□ -0.33
APOC1-205ENST00000589781 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
APOC1-205ENST00000589781 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
APOC1-205ENST00000589781 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
APOC1-205ENST00000589781 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
APOC1-205ENST00000589781 ABCC4O15439 1325 aa12.96□□□□□ -0.33
APOC1-205ENST00000589781 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.33
APOC1-205ENST00000589781 EIF4A1P60842 406 aaKnown RBP12.96□□□□□ -0.33
APOC1-205ENST00000589781 ITPRIPQ8IWB1 547 aa12.96□□□□□ -0.33
APOC1-205ENST00000589781 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
APOC1-205ENST00000589781 ZNF496Q96IT1 587 aaPredicted RBP12.96□□□□□ -0.33
APOC1-205ENST00000589781 FLAD1Q8NFF5 587 aa12.95□□□□□ -0.34
APOC1-205ENST00000589781 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
APOC1-205ENST00000589781 ZNF790Q6PG37 636 aa12.94□□□□□ -0.34
APOC1-205ENST00000589781 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
APOC1-205ENST00000589781 SRP68Q9UHB9 627 aaKnown RBP12.94□□□□□ -0.34
APOC1-205ENST00000589781 SOS1Q07889 1333 aaPredicted RBP12.93□□□□□ -0.34
APOC1-205ENST00000589781 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms