RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 EIF4A1P60842 406 aaKnown RBP27.58■■■□□ 2.01
R3HDM4-204ENST00000589428 GNAI1P63096 354 aa27.58■■■□□ 2.01
R3HDM4-204ENST00000589428 UBR3Q6ZT12 1888 aa27.58■■■□□ 2.01
R3HDM4-204ENST00000589428 PNPLA7Q6ZV29 1317 aa27.57■■■□□ 2
R3HDM4-204ENST00000589428 CYP19A1P11511 503 aaPredicted RBP27.57■■■□□ 2
R3HDM4-204ENST00000589428 TRMT2AQ8IZ69 625 aaKnown RBP27.57■■■□□ 2
R3HDM4-204ENST00000589428 CASZ1Q86V15 1759 aa27.57■■■□□ 2
R3HDM4-204ENST00000589428 DUSP27Q5VZP5 1158 aa27.56■■■□□ 2
R3HDM4-204ENST00000589428 FLAD1Q8NFF5 587 aa27.56■■■□□ 2
R3HDM4-204ENST00000589428 CCDC87Q9NVE4 849 aa27.56■■■□□ 2
R3HDM4-204ENST00000589428 RTCBQ9Y3I0 505 aaKnown RBP27.56■■■□□ 2
R3HDM4-204ENST00000589428 SSFA2P28290 1259 aa27.55■■■□□ 2
R3HDM4-204ENST00000589428 PHF14O94880 888 aa27.55■■■□□ 2
R3HDM4-204ENST00000589428 MYH14Q7Z406 1995 aaKnown RBP27.55■■■□□ 2
R3HDM4-204ENST00000589428 LAMB4A4D0S4 1761 aa27.54■■■□□ 2
R3HDM4-204ENST00000589428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.53■■■□□ 2
R3HDM4-204ENST00000589428 ZNF853P0CG23 659 aa27.53■■■□□ 2
R3HDM4-204ENST00000589428 MBIPQ9NS73 344 aa27.53■■■□□ 2
R3HDM4-204ENST00000589428 MSH5O43196 834 aa27.53■■■□□ 2
R3HDM4-204ENST00000589428 RPS6KA4O75676 772 aa27.53■■■□□ 2
R3HDM4-204ENST00000589428 PRAMEF22A3QJZ6 481 aa27.52■■■□□ 2
R3HDM4-204ENST00000589428 GIGYF1O75420 1035 aaPredicted RBP27.52■■■□□ 2
R3HDM4-204ENST00000589428 INTS5Q6P9B9 1019 aaKnown RBP27.52■■■□□ 2
R3HDM4-204ENST00000589428 PDGFDQ9GZP0 370 aaPredicted RBP27.52■■■□□ 2
R3HDM4-204ENST00000589428 AMIGO3Q86WK7 504 aa27.51■■□□□ 1.99
R3HDM4-204ENST00000589428 MYH16Q9H6N6 1097 aa27.51■■□□□ 1.99
R3HDM4-204ENST00000589428 ZBTB1Q9Y2K1 713 aa27.51■■□□□ 1.99
R3HDM4-204ENST00000589428 FANCIQ9NVI1 1328 aa27.5■■□□□ 1.99
R3HDM4-204ENST00000589428 ADRA2BP18089 450 aa27.5■■□□□ 1.99
R3HDM4-204ENST00000589428 COL23A1Q86Y22 540 aaPredicted RBP27.5■■□□□ 1.99
R3HDM4-204ENST00000589428 USP16Q9Y5T5 823 aa27.5■■□□□ 1.99
R3HDM4-204ENST00000589428 TSR2Q969E8 191 aaKnown RBP27.5■■□□□ 1.99
R3HDM4-204ENST00000589428 TRAPPC3LQ5T215 181 aa27.49■■□□□ 1.99
R3HDM4-204ENST00000589428 CANXP27824 592 aaKnown RBP27.48■■□□□ 1.99
R3HDM4-204ENST00000589428 SMIM5Q71RC9 77 aa27.48■■□□□ 1.99
R3HDM4-204ENST00000589428 SOS1Q07889 1333 aaPredicted RBP27.48■■□□□ 1.99
R3HDM4-204ENST00000589428 SLC16A10Q8TF71 515 aa27.47■■□□□ 1.99
R3HDM4-204ENST00000589428 ZBTB7AO95365 584 aa27.47■■□□□ 1.99
R3HDM4-204ENST00000589428 A1BGP04217 495 aa27.46■■□□□ 1.99
R3HDM4-204ENST00000589428 MTFR1LQ9H019 292 aa27.46■■□□□ 1.99
R3HDM4-204ENST00000589428 NPM2Q86SE8 214 aaKnown RBP27.45■■□□□ 1.99
R3HDM4-204ENST00000589428 COL15A1P39059 1388 aa27.45■■□□□ 1.98
R3HDM4-204ENST00000589428 RFC4P35249 363 aa27.44■■□□□ 1.98
R3HDM4-204ENST00000589428 KRT24Q2M2I5 525 aa27.44■■□□□ 1.98
R3HDM4-204ENST00000589428 C4AP0C0L4 1744 aa27.44■■□□□ 1.98
R3HDM4-204ENST00000589428 ARHGEF1Q92888 912 aaKnown RBP27.44■■□□□ 1.98
R3HDM4-204ENST00000589428 ZNF330Q9Y3S2 320 aaPredicted RBP27.44■■□□□ 1.98
R3HDM4-204ENST00000589428 HOXB7P09629 217 aa27.43■■□□□ 1.98
R3HDM4-204ENST00000589428 IL6STP40189 918 aaPredicted RBP27.43■■□□□ 1.98
R3HDM4-204ENST00000589428 SPON1Q9HCB6 807 aa27.42■■□□□ 1.98
R3HDM4-204ENST00000589428 EIF2S2P20042 333 aaKnown RBP27.41■■□□□ 1.98
R3HDM4-204ENST00000589428 PIP4K2AP48426 406 aaPredicted RBP27.41■■□□□ 1.98
R3HDM4-204ENST00000589428 A0A087WZG4 1122 aa27.4■■□□□ 1.98
R3HDM4-204ENST00000589428 EIF5P55010 431 aaKnown RBP27.4■■□□□ 1.98
R3HDM4-204ENST00000589428 ATF5Q9Y2D1 282 aaPredicted RBP27.4■■□□□ 1.98
R3HDM4-204ENST00000589428 ERBB4Q15303 1308 aa27.4■■□□□ 1.98
R3HDM4-204ENST00000589428 LRP5O75197 1615 aa27.39■■□□□ 1.98
R3HDM4-204ENST00000589428 EXOSC9Q06265 439 aaKnown RBP27.38■■□□□ 1.97
R3HDM4-204ENST00000589428 HDGFL1Q5TGJ6 251 aa27.38■■□□□ 1.97
R3HDM4-204ENST00000589428 USP42Q9H9J4 1324 aaKnown RBP27.38■■□□□ 1.97
R3HDM4-204ENST00000589428 NBPF26B4DH59 902 aa27.37■■□□□ 1.97
R3HDM4-204ENST00000589428 ZPR1O75312 459 aa27.37■■□□□ 1.97
R3HDM4-204ENST00000589428 MSL1Q68DK7 614 aa27.37■■□□□ 1.97
R3HDM4-204ENST00000589428 NBPF10Q6P3W6 841 aaKnown RBP27.37■■□□□ 1.97
R3HDM4-204ENST00000589428 NBPF15Q8N660 670 aa27.37■■□□□ 1.97
R3HDM4-204ENST00000589428 ELL2O00472 640 aaPredicted RBP27.36■■□□□ 1.97
R3HDM4-204ENST00000589428 C8orf58Q8NAV2 365 aa27.36■■□□□ 1.97
R3HDM4-204ENST00000589428 NECTIN2Q92692 538 aa27.36■■□□□ 1.97
R3HDM4-204ENST00000589428 ARXQ96QS3 562 aa27.35■■□□□ 1.97
R3HDM4-204ENST00000589428 SRP68Q9UHB9 627 aaKnown RBP27.35■■□□□ 1.97
R3HDM4-204ENST00000589428 NARFQ9UHQ1 456 aa27.35■■□□□ 1.97
R3HDM4-204ENST00000589428 MYL6BP14649 208 aa27.34■■□□□ 1.97
R3HDM4-204ENST00000589428 POLD1P28340 1107 aa27.34■■□□□ 1.97
R3HDM4-204ENST00000589428 CHMP4AQ9BY43 222 aa27.34■■□□□ 1.97
R3HDM4-204ENST00000589428 RCAN3Q9UKA8 241 aa27.34■■□□□ 1.97
R3HDM4-204ENST00000589428 GYS1P13807 737 aa27.33■■□□□ 1.96
R3HDM4-204ENST00000589428 COL24A1Q17RW2 1714 aa27.32■■□□□ 1.96
R3HDM4-204ENST00000589428 SCN7AQ01118 1682 aa27.32■■□□□ 1.96
R3HDM4-204ENST00000589428 TWISTNBQ3B726 338 aaPredicted RBP27.32■■□□□ 1.96
R3HDM4-204ENST00000589428 USPL1Q5W0Q7 1092 aa27.32■■□□□ 1.96
R3HDM4-204ENST00000589428 DZIP3Q86Y13 1208 aaKnown RBP27.32■■□□□ 1.96
R3HDM4-204ENST00000589428 NLGN1Q8N2Q7 840 aa27.32■■□□□ 1.96
R3HDM4-204ENST00000589428 TSPYL6Q8N831 410 aa27.32■■□□□ 1.96
R3HDM4-204ENST00000589428 TBC1D2BQ9UPU7 963 aa27.32■■□□□ 1.96
R3HDM4-204ENST00000589428 PTGER2P43116 358 aa27.31■■□□□ 1.96
R3HDM4-204ENST00000589428 CHPF2Q9P2E5 772 aa27.3■■□□□ 1.96
R3HDM4-204ENST00000589428 DDX21Q9NR30 783 aaKnown RBP eCLIP27.3■■□□□ 1.96
R3HDM4-204ENST00000589428 DBF4Q9UBU7 674 aaPredicted RBP27.3■■□□□ 1.96
R3HDM4-204ENST00000589428 PPP1R1BQ9UD71 204 aaPredicted RBP27.3■■□□□ 1.96
R3HDM4-204ENST00000589428 CT47B1P0C2W7 299 aaPredicted RBP27.29■■□□□ 1.96
R3HDM4-204ENST00000589428 PDIA6Q15084 440 aa27.29■■□□□ 1.96
R3HDM4-204ENST00000589428 SGIP1Q9BQI5 828 aa27.29■■□□□ 1.96
R3HDM4-204ENST00000589428 SRCAPQ6ZRS2 3230 aa27.29■■□□□ 1.96
R3HDM4-204ENST00000589428 ANXA1P04083 346 aa27.28■■□□□ 1.96
R3HDM4-204ENST00000589428 PROSER3Q2NL68 480 aa27.28■■□□□ 1.96
R3HDM4-204ENST00000589428 BCORQ6W2J9 1755 aa27.28■■□□□ 1.96
R3HDM4-204ENST00000589428 CCDC30Q5VVM6 783 aa27.27■■□□□ 1.96
R3HDM4-204ENST00000589428 KIF6Q6ZMV9 814 aa27.27■■□□□ 1.96
R3HDM4-204ENST00000589428 FKBP8Q14318 412 aa27.27■■□□□ 1.96
R3HDM4-204ENST00000589428 SUPT16HQ9Y5B9 1047 aaKnown RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms