RNA–Protein interactions for RNA: ENST00000589369.2

AP3D1-207, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-207ENST00000589369 COL15A1P39059 1388 aa22.92■■□□□ 1.26
AP3D1-207ENST00000589369 ZPR1O75312 459 aa22.92■■□□□ 1.26
AP3D1-207ENST00000589369 RSPH6AQ9H0K4 717 aa22.92■■□□□ 1.26
AP3D1-207ENST00000589369 PPP2R1AP30153 589 aa22.91■■□□□ 1.26
AP3D1-207ENST00000589369 PRKAR2BP31323 418 aa22.91■■□□□ 1.26
AP3D1-207ENST00000589369 CFAP53Q96M91 514 aa22.91■■□□□ 1.26
AP3D1-207ENST00000589369 NARFQ9UHQ1 456 aa22.91■■□□□ 1.26
AP3D1-207ENST00000589369 FCHSD2O94868 740 aa22.9■■□□□ 1.26
AP3D1-207ENST00000589369 TEFQ10587 303 aa22.9■■□□□ 1.26
AP3D1-207ENST00000589369 TTC5Q8N0Z6 440 aa22.9■■□□□ 1.26
AP3D1-207ENST00000589369 ZNF496Q96IT1 587 aaPredicted RBP22.9■■□□□ 1.26
AP3D1-207ENST00000589369 BCL2L12Q9HB09 334 aa22.9■■□□□ 1.26
AP3D1-207ENST00000589369 NFIXQ14938 502 aa22.89■■□□□ 1.25
AP3D1-207ENST00000589369 ZNF790Q6PG37 636 aa22.89■■□□□ 1.25
AP3D1-207ENST00000589369 CEMIPQ8WUJ3 1361 aa22.89■■□□□ 1.25
AP3D1-207ENST00000589369 CANXP27824 592 aaKnown RBP22.88■■□□□ 1.25
AP3D1-207ENST00000589369 CHRNA5P30532 468 aa22.88■■□□□ 1.25
AP3D1-207ENST00000589369 ARHGAP27Q6ZUM4 889 aa22.88■■□□□ 1.25
AP3D1-207ENST00000589369 HEG1Q9ULI3 1381 aa22.88■■□□□ 1.25
AP3D1-207ENST00000589369 PIM2Q9P1W9 311 aa22.87■■□□□ 1.25
AP3D1-207ENST00000589369 AFDNP55196 1824 aaKnown RBP22.87■■□□□ 1.25
AP3D1-207ENST00000589369 ARFGEF1Q9Y6D6 1849 aa22.87■■□□□ 1.25
AP3D1-207ENST00000589369 STARD3NLO95772 234 aa22.86■■□□□ 1.25
AP3D1-207ENST00000589369 EIF5P55010 431 aaKnown RBP22.86■■□□□ 1.25
AP3D1-207ENST00000589369 NRXN2Q9P2S2 1712 aa22.85■■□□□ 1.25
AP3D1-207ENST00000589369 KCNQ3O43525 872 aa22.85■■□□□ 1.25
AP3D1-207ENST00000589369 U2AF1L5P0DN76 240 aaPredicted RBP22.85■■□□□ 1.25
AP3D1-207ENST00000589369 U2AF1Q01081 240 aaKnown RBP eCLIP22.85■■□□□ 1.25
AP3D1-207ENST00000589369 NUDCQ9Y266 331 aa22.85■■□□□ 1.25
AP3D1-207ENST00000589369 DALRD3Q5D0E6 543 aaKnown RBP22.83■■□□□ 1.25
AP3D1-207ENST00000589369 CEP350Q5VT06 3117 aa22.82■■□□□ 1.24
AP3D1-207ENST00000589369 KIF3CO14782 793 aa22.82■■□□□ 1.24
AP3D1-207ENST00000589369 SERPINB2P05120 415 aa22.82■■□□□ 1.24
AP3D1-207ENST00000589369 FMNL2Q96PY5 1086 aa22.82■■□□□ 1.24
AP3D1-207ENST00000589369 BTBD11A6QL63 1104 aa22.81■■□□□ 1.24
AP3D1-207ENST00000589369 TEX13AQ9BXU3 409 aaPredicted RBP22.81■■□□□ 1.24
AP3D1-207ENST00000589369 CARMIL3Q8ND23 1372 aa22.8■■□□□ 1.24
AP3D1-207ENST00000589369 SCN7AQ01118 1682 aa22.79■■□□□ 1.24
AP3D1-207ENST00000589369 A0A087WZG4 1122 aa22.79■■□□□ 1.24
AP3D1-207ENST00000589369 A1BGP04217 495 aa22.79■■□□□ 1.24
AP3D1-207ENST00000589369 BICDL1Q6ZP65 573 aa22.79■■□□□ 1.24
AP3D1-207ENST00000589369 MCM10Q7L590 875 aa22.79■■□□□ 1.24
AP3D1-207ENST00000589369 IL6STP40189 918 aaPredicted RBP22.78■■□□□ 1.24
AP3D1-207ENST00000589369 C9orf131Q5VYM1 1079 aa22.78■■□□□ 1.24
AP3D1-207ENST00000589369 TBC1D9BQ66K14 1250 aa22.78■■□□□ 1.24
AP3D1-207ENST00000589369 TBC1D2BQ9UPU7 963 aa22.78■■□□□ 1.24
AP3D1-207ENST00000589369 ZNF330Q9Y3S2 320 aaPredicted RBP22.78■■□□□ 1.24
AP3D1-207ENST00000589369 DCTN1Q14203 1278 aa22.77■■□□□ 1.24
AP3D1-207ENST00000589369 DLEC1Q9Y238 1755 aa22.76■■□□□ 1.23
AP3D1-207ENST00000589369 PRAMEF22A3QJZ6 481 aa22.76■■□□□ 1.23
AP3D1-207ENST00000589369 USP16Q9Y5T5 823 aa22.76■■□□□ 1.23
AP3D1-207ENST00000589369 RTF1Q92541 710 aaKnown RBP22.75■■□□□ 1.23
AP3D1-207ENST00000589369 NMRK2Q9NPI5 230 aa22.74■■□□□ 1.23
AP3D1-207ENST00000589369 CAMTA2O94983 1202 aa22.73■■□□□ 1.23
AP3D1-207ENST00000589369 PIP4K2AP48426 406 aaPredicted RBP22.73■■□□□ 1.23
AP3D1-207ENST00000589369 C2CD5Q86YS7 1000 aa22.73■■□□□ 1.23
AP3D1-207ENST00000589369 SBF1O95248 1867 aa22.73■■□□□ 1.23
AP3D1-207ENST00000589369 ANKRD31Q8N7Z5 1873 aa22.73■■□□□ 1.23
AP3D1-207ENST00000589369 HTATSF1O43719 755 aaKnown RBP22.72■■□□□ 1.23
AP3D1-207ENST00000589369 HSPA6P17066 643 aa22.72■■□□□ 1.23
AP3D1-207ENST00000589369 RNF181Q9P0P0 153 aa22.72■■□□□ 1.23
AP3D1-207ENST00000589369 RASSF7Q02833 373 aa22.71■■□□□ 1.23
AP3D1-207ENST00000589369 CCDC24Q8N4L8 307 aa22.71■■□□□ 1.23
AP3D1-207ENST00000589369 BCORQ6W2J9 1755 aa22.71■■□□□ 1.23
AP3D1-207ENST00000589369 SNRPA1P09661 255 aaKnown RBP22.7■■□□□ 1.22
AP3D1-207ENST00000589369 PRR5LQ6MZQ0 368 aa22.7■■□□□ 1.22
AP3D1-207ENST00000589369 TTLL6Q8N841 843 aa22.7■■□□□ 1.22
AP3D1-207ENST00000589369 H0YIN7 160 aa22.69■■□□□ 1.22
AP3D1-207ENST00000589369 PRELPP51888 382 aa22.69■■□□□ 1.22
AP3D1-207ENST00000589369 DZIP3Q86Y13 1208 aaKnown RBP22.69■■□□□ 1.22
AP3D1-207ENST00000589369 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
AP3D1-207ENST00000589369 PLEKHF1Q96S99 279 aa22.68■■□□□ 1.22
AP3D1-207ENST00000589369 BRIP1Q9BX63 1249 aa22.68■■□□□ 1.22
AP3D1-207ENST00000589369 MIS18AQ9NYP9 233 aa22.68■■□□□ 1.22
AP3D1-207ENST00000589369 DLG5Q8TDM6 1919 aa22.68■■□□□ 1.22
AP3D1-207ENST00000589369 NBPF26B4DH59 902 aa22.67■■□□□ 1.22
AP3D1-207ENST00000589369 TAF7Q15545 349 aaPredicted RBP22.67■■□□□ 1.22
AP3D1-207ENST00000589369 NBPF10Q6P3W6 841 aaKnown RBP22.67■■□□□ 1.22
AP3D1-207ENST00000589369 NPM2Q86SE8 214 aaKnown RBP22.67■■□□□ 1.22
AP3D1-207ENST00000589369 NBPF15Q8N660 670 aa22.67■■□□□ 1.22
AP3D1-207ENST00000589369 TOMM70O94826 608 aa22.66■■□□□ 1.22
AP3D1-207ENST00000589369 SETDB2Q96T68 719 aa22.66■■□□□ 1.22
AP3D1-207ENST00000589369 NFKBIEO00221 500 aa22.64■■□□□ 1.21
AP3D1-207ENST00000589369 PDE6BP35913 854 aa22.64■■□□□ 1.21
AP3D1-207ENST00000589369 CNBD1Q8NA66 436 aa22.64■■□□□ 1.21
AP3D1-207ENST00000589369 ZNF622Q969S3 477 aaKnown RBP eCLIP22.64■■□□□ 1.211e-7■■□□□ 12.1
AP3D1-207ENST00000589369 LMNB1P20700 586 aa22.63■■□□□ 1.21
AP3D1-207ENST00000589369 KDM3BQ7LBC6 1761 aa22.63■■□□□ 1.21
AP3D1-207ENST00000589369 KDM2BQ8NHM5 1336 aa22.62■■□□□ 1.21
AP3D1-207ENST00000589369 NFE2L2Q16236 605 aa22.62■■□□□ 1.21
AP3D1-207ENST00000589369 THUMPD2Q9BTF0 503 aaKnown RBP22.62■■□□□ 1.21
AP3D1-207ENST00000589369 PDZRN3Q9UPQ7 1066 aa22.62■■□□□ 1.21
AP3D1-207ENST00000589369 LAMB4A4D0S4 1761 aa22.61■■□□□ 1.21
AP3D1-207ENST00000589369 NEFMP07197 916 aa22.61■■□□□ 1.21
AP3D1-207ENST00000589369 CLEC4GQ6UXB4 293 aa22.61■■□□□ 1.21
AP3D1-207ENST00000589369 RBM46Q8TBY0 533 aaKnown RBP22.6■■□□□ 1.21
AP3D1-207ENST00000589369 RRAGCQ9HB90 399 aa22.6■■□□□ 1.21
AP3D1-207ENST00000589369 ZNF219Q9P2Y4 722 aaPredicted RBP22.6■■□□□ 1.21
AP3D1-207ENST00000589369 CCDC88AQ3V6T2 1871 aa22.6■■□□□ 1.21
AP3D1-207ENST00000589369 ZC3H4Q9UPT8 1303 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms