RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 THUMPD2Q9BTF0 503 aaKnown RBP21.12■□□□□ 0.97
RETREG3-206ENST00000588423 BABAM1Q9NWV8 329 aa21.12■□□□□ 0.97
RETREG3-206ENST00000588423 ZBTB1Q9Y2K1 713 aa21.12■□□□□ 0.97
RETREG3-206ENST00000588423 SNRPA1P09661 255 aaKnown RBP21.11■□□□□ 0.97
RETREG3-206ENST00000588423 NLGN1Q8N2Q7 840 aa21.11■□□□□ 0.97
RETREG3-206ENST00000588423 SYT17Q9BSW7 474 aa21.11■□□□□ 0.97
RETREG3-206ENST00000588423 C4AP0C0L4 1744 aa21.11■□□□□ 0.97
RETREG3-206ENST00000588423 KDM3BQ7LBC6 1761 aa21.1■□□□□ 0.97
RETREG3-206ENST00000588423 GYS1P13807 737 aa21.1■□□□□ 0.97
RETREG3-206ENST00000588423 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
RETREG3-206ENST00000588423 USP42Q9H9J4 1324 aaKnown RBP21.09■□□□□ 0.97
RETREG3-206ENST00000588423 MRS2Q9HD23 443 aa21.09■□□□□ 0.97
RETREG3-206ENST00000588423 MIS18AQ9NYP9 233 aa21.09■□□□□ 0.97
RETREG3-206ENST00000588423 TRIM35Q9UPQ4 493 aa21.09■□□□□ 0.97
RETREG3-206ENST00000588423 COL15A1P39059 1388 aa21.09■□□□□ 0.97
RETREG3-206ENST00000588423 NEUROD2Q15784 382 aa21.08■□□□□ 0.97
RETREG3-206ENST00000588423 EIF5P55010 431 aaKnown RBP21.07■□□□□ 0.96
RETREG3-206ENST00000588423 USP16Q9Y5T5 823 aa21.07■□□□□ 0.96
RETREG3-206ENST00000588423 A0A087WZG4 1122 aa21.06■□□□□ 0.96
RETREG3-206ENST00000588423 CANXP27824 592 aaKnown RBP21.06■□□□□ 0.96
RETREG3-206ENST00000588423 IL6STP40189 918 aaPredicted RBP21.06■□□□□ 0.96
RETREG3-206ENST00000588423 EIF4A1P60842 406 aaKnown RBP21.06■□□□□ 0.96
RETREG3-206ENST00000588423 ZPR1O75312 459 aa21.05■□□□□ 0.96
RETREG3-206ENST00000588423 SRP68Q9UHB9 627 aaKnown RBP21.05■□□□□ 0.96
RETREG3-206ENST00000588423 NARFQ9UHQ1 456 aa21.05■□□□□ 0.96
RETREG3-206ENST00000588423 TSPYL4Q9UJ04 414 aa21.05■□□□□ 0.96
RETREG3-206ENST00000588423 PRAMEF22A3QJZ6 481 aa21.04■□□□□ 0.96
RETREG3-206ENST00000588423 APAF1O14727 1248 aa21.04■□□□□ 0.96
RETREG3-206ENST00000588423 GIGYF1O75420 1035 aaPredicted RBP21.04■□□□□ 0.96
RETREG3-206ENST00000588423 A1BGP04217 495 aa21.04■□□□□ 0.96
RETREG3-206ENST00000588423 MMP10P09238 476 aa21.04■□□□□ 0.96
RETREG3-206ENST00000588423 CD2APQ9Y5K6 639 aa21.04■□□□□ 0.96
RETREG3-206ENST00000588423 USPL1Q5W0Q7 1092 aa21.03■□□□□ 0.96
RETREG3-206ENST00000588423 CHL1O00533 1208 aa21.02■□□□□ 0.96
RETREG3-206ENST00000588423 LAMB4A4D0S4 1761 aa21.02■□□□□ 0.96
RETREG3-206ENST00000588423 DCAF8L1A6NGE4 600 aa21.01■□□□□ 0.95
RETREG3-206ENST00000588423 FKBP8Q14318 412 aa21.01■□□□□ 0.95
RETREG3-206ENST00000588423 NCBP3Q53F19 620 aaKnown RBP21.01■□□□□ 0.95
RETREG3-206ENST00000588423 KLHL34Q8N239 644 aa21.01■□□□□ 0.95
RETREG3-206ENST00000588423 CALD1Q05682 793 aaKnown RBP21■□□□□ 0.95
RETREG3-206ENST00000588423 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
RETREG3-206ENST00000588423 PARP3Q9Y6F1 533 aa21■□□□□ 0.95
RETREG3-206ENST00000588423 TM4SF1P30408 202 aa20.99■□□□□ 0.95
RETREG3-206ENST00000588423 CFAP44Q96MT7 982 aa20.99■□□□□ 0.95
RETREG3-206ENST00000588423 CCDC27Q2M243 656 aa20.98■□□□□ 0.95
RETREG3-206ENST00000588423 NLGN2Q8NFZ4 835 aa20.98■□□□□ 0.95
RETREG3-206ENST00000588423 BCL2L12Q9HB09 334 aa20.98■□□□□ 0.95
RETREG3-206ENST00000588423 SCN7AQ01118 1682 aa20.97■□□□□ 0.95
RETREG3-206ENST00000588423 NBPF26B4DH59 902 aa20.97■□□□□ 0.95
RETREG3-206ENST00000588423 NBPF10Q6P3W6 841 aaKnown RBP20.97■□□□□ 0.95
RETREG3-206ENST00000588423 NBPF15Q8N660 670 aa20.97■□□□□ 0.95
RETREG3-206ENST00000588423 ZNF330Q9Y3S2 320 aaPredicted RBP20.97■□□□□ 0.95
RETREG3-206ENST00000588423 ERBB4Q15303 1308 aa20.97■□□□□ 0.95
RETREG3-206ENST00000588423 C10orf71Q711Q0 1435 aa20.96■□□□□ 0.95
RETREG3-206ENST00000588423 RGL2O15211 777 aa20.96■□□□□ 0.95
RETREG3-206ENST00000588423 POLRMTO00411 1230 aaKnown RBP20.95■□□□□ 0.94
RETREG3-206ENST00000588423 ZNF853P0CG23 659 aa20.95■□□□□ 0.94
RETREG3-206ENST00000588423 DDR1Q08345 913 aa20.95■□□□□ 0.94
RETREG3-206ENST00000588423 DZIP3Q86Y13 1208 aaKnown RBP20.95■□□□□ 0.94
RETREG3-206ENST00000588423 IFT57Q9NWB7 429 aa20.95■□□□□ 0.94
RETREG3-206ENST00000588423 TBC1D2BQ9UPU7 963 aa20.95■□□□□ 0.94
RETREG3-206ENST00000588423 LAS1LQ9Y4W2 734 aaKnown RBP20.95■□□□□ 0.94
RETREG3-206ENST00000588423 KIF13BQ9NQT8 1826 aa20.94■□□□□ 0.94
RETREG3-206ENST00000588423 CAMTA2O94983 1202 aa20.94■□□□□ 0.94
RETREG3-206ENST00000588423 PIP4K2AP48426 406 aaPredicted RBP20.94■□□□□ 0.94
RETREG3-206ENST00000588423 NFIXQ14938 502 aa20.94■□□□□ 0.94
RETREG3-206ENST00000588423 TGFB2P61812 414 aa20.93■□□□□ 0.94
RETREG3-206ENST00000588423 GNAI1P63096 354 aa20.93■□□□□ 0.94
RETREG3-206ENST00000588423 CLEC4GQ6UXB4 293 aa20.93■□□□□ 0.94
RETREG3-206ENST00000588423 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
RETREG3-206ENST00000588423 HOXB7P09629 217 aa20.92■□□□□ 0.94
RETREG3-206ENST00000588423 MBIPQ9NS73 344 aa20.91■□□□□ 0.94
RETREG3-206ENST00000588423 NRXN2Q9P2S2 1712 aa20.9■□□□□ 0.94
RETREG3-206ENST00000588423 TBC1D9BQ66K14 1250 aa20.9■□□□□ 0.94
RETREG3-206ENST00000588423 WWC1Q8IX03 1113 aa20.9■□□□□ 0.94
RETREG3-206ENST00000588423 ZNF652Q9Y2D9 606 aa20.9■□□□□ 0.94
RETREG3-206ENST00000588423 PXDNLA1KZ92 1463 aa20.89■□□□□ 0.94
RETREG3-206ENST00000588423 SERPINB2P05120 415 aa20.89■□□□□ 0.93
RETREG3-206ENST00000588423 GPR162Q16538 588 aa20.89■□□□□ 0.93
RETREG3-206ENST00000588423 FAM9BQ8IZU0 186 aa20.89■□□□□ 0.93
RETREG3-206ENST00000588423 NGEFQ8N5V2 710 aa20.89■□□□□ 0.93
RETREG3-206ENST00000588423 CARMIL3Q8ND23 1372 aa20.88■□□□□ 0.93
RETREG3-206ENST00000588423 EIF2S2P20042 333 aaKnown RBP20.88■□□□□ 0.93
RETREG3-206ENST00000588423 KIAA1551Q9HCM1 1747 aa20.87■□□□□ 0.93
RETREG3-206ENST00000588423 IL16Q14005 1332 aa20.87■□□□□ 0.93
RETREG3-206ENST00000588423 ERVV-1B6SEH8 477 aa20.87■□□□□ 0.93
RETREG3-206ENST00000588423 CCER2I3L3R5 266 aa20.87■□□□□ 0.93
RETREG3-206ENST00000588423 MYL6BP14649 208 aa20.87■□□□□ 0.93
RETREG3-206ENST00000588423 PDIA6Q15084 440 aa20.87■□□□□ 0.93
RETREG3-206ENST00000588423 KRT24Q2M2I5 525 aa20.87■□□□□ 0.93
RETREG3-206ENST00000588423 LRP10Q7Z4F1 713 aa20.87■□□□□ 0.93
RETREG3-206ENST00000588423 BICDL1Q6ZP65 573 aa20.86■□□□□ 0.93
RETREG3-206ENST00000588423 SETDB2Q96T68 719 aa20.86■□□□□ 0.93
RETREG3-206ENST00000588423 MAP3K15Q6ZN16 1313 aa20.85■□□□□ 0.93
RETREG3-206ENST00000588423 GRIN3BO60391 1043 aa20.85■□□□□ 0.93
RETREG3-206ENST00000588423 KIF6Q6ZMV9 814 aa20.85■□□□□ 0.93
RETREG3-206ENST00000588423 AFDNP55196 1824 aaKnown RBP20.84■□□□□ 0.93
RETREG3-206ENST00000588423 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
RETREG3-206ENST00000588423 HDGFL1Q5TGJ6 251 aa20.84■□□□□ 0.93
RETREG3-206ENST00000588423 DUSP27Q5VZP5 1158 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms