RNA–Protein interactions for RNA: ENST00000588352.5

GHDC-208, Transcript of GH3 domain containing, humanhuman

TSL 5

Gene GHDC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-208ENST00000588352 TSPYL4Q9UJ04 414 aa22.35■■□□□ 1.17
GHDC-208ENST00000588352 MIS18AQ9NYP9 233 aa22.34■■□□□ 1.17
GHDC-208ENST00000588352 COL24A1Q17RW2 1714 aa22.34■■□□□ 1.17
GHDC-208ENST00000588352 MSH5O43196 834 aa22.33■■□□□ 1.17
GHDC-208ENST00000588352 EIF4A1P60842 406 aaKnown RBP22.33■■□□□ 1.17
GHDC-208ENST00000588352 ZBTB1Q9Y2K1 713 aa22.33■■□□□ 1.17
GHDC-208ENST00000588352 TRAPPC3LQ5T215 181 aa22.32■■□□□ 1.16
GHDC-208ENST00000588352 FAM9BQ8IZU0 186 aa22.32■■□□□ 1.16
GHDC-208ENST00000588352 SRCAPQ6ZRS2 3230 aa22.32■■□□□ 1.16
GHDC-208ENST00000588352 COL15A1P39059 1388 aa22.31■■□□□ 1.16
GHDC-208ENST00000588352 CHL1O00533 1208 aa22.31■■□□□ 1.16
GHDC-208ENST00000588352 ATF5Q9Y2D1 282 aaPredicted RBP22.31■■□□□ 1.16
GHDC-208ENST00000588352 LAMB4A4D0S4 1761 aa22.3■■□□□ 1.16
GHDC-208ENST00000588352 SMIM5Q71RC9 77 aa22.3■■□□□ 1.16
GHDC-208ENST00000588352 NGEFQ8N5V2 710 aa22.3■■□□□ 1.16
GHDC-208ENST00000588352 ARHGEF1Q92888 912 aaKnown RBP22.3■■□□□ 1.16
GHDC-208ENST00000588352 CFAP44Q96MT7 982 aa22.3■■□□□ 1.16
GHDC-208ENST00000588352 IFT57Q9NWB7 429 aa22.3■■□□□ 1.16
GHDC-208ENST00000588352 C4AP0C0L4 1744 aa22.29■■□□□ 1.16
GHDC-208ENST00000588352 GIGYF1O75420 1035 aaPredicted RBP22.29■■□□□ 1.16
GHDC-208ENST00000588352 MYH14Q7Z406 1995 aaKnown RBP22.29■■□□□ 1.16
GHDC-208ENST00000588352 PRAMEF22A3QJZ6 481 aa22.28■■□□□ 1.16
GHDC-208ENST00000588352 ZNF853P0CG23 659 aa22.28■■□□□ 1.16
GHDC-208ENST00000588352 POLD1P28340 1107 aa22.28■■□□□ 1.16
GHDC-208ENST00000588352 USP42Q9H9J4 1324 aaKnown RBP22.28■■□□□ 1.16
GHDC-208ENST00000588352 RFC4P35249 363 aa22.27■■□□□ 1.16
GHDC-208ENST00000588352 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
GHDC-208ENST00000588352 WWC1Q8IX03 1113 aa22.27■■□□□ 1.16
GHDC-208ENST00000588352 USP16Q9Y5T5 823 aa22.27■■□□□ 1.16
GHDC-208ENST00000588352 EIF5P55010 431 aaKnown RBP22.26■■□□□ 1.15
GHDC-208ENST00000588352 GNAI1P63096 354 aa22.26■■□□□ 1.15
GHDC-208ENST00000588352 CANXP27824 592 aaKnown RBP22.25■■□□□ 1.15
GHDC-208ENST00000588352 MSL1Q68DK7 614 aa22.25■■□□□ 1.15
GHDC-208ENST00000588352 PPP1R1BQ9UD71 204 aaPredicted RBP22.25■■□□□ 1.15
GHDC-208ENST00000588352 IL16Q14005 1332 aa22.25■■□□□ 1.15
GHDC-208ENST00000588352 ERBB4Q15303 1308 aa22.25■■□□□ 1.15
GHDC-208ENST00000588352 A0A087WZG4 1122 aa22.24■■□□□ 1.15
GHDC-208ENST00000588352 A1BGP04217 495 aa22.24■■□□□ 1.15
GHDC-208ENST00000588352 GYS1P13807 737 aa22.24■■□□□ 1.15
GHDC-208ENST00000588352 ARXQ96QS3 562 aa22.24■■□□□ 1.15
GHDC-208ENST00000588352 HOXB7P09629 217 aa22.23■■□□□ 1.15
GHDC-208ENST00000588352 NLGN1Q8N2Q7 840 aa22.23■■□□□ 1.15
GHDC-208ENST00000588352 MBIPQ9NS73 344 aa22.23■■□□□ 1.15
GHDC-208ENST00000588352 LAS1LQ9Y4W2 734 aaKnown RBP22.23■■□□□ 1.15
GHDC-208ENST00000588352 NARFQ9UHQ1 456 aa22.22■■□□□ 1.15
GHDC-208ENST00000588352 SCN7AQ01118 1682 aa22.22■■□□□ 1.15
GHDC-208ENST00000588352 MIER1Q8N108 512 aa22.21■■□□□ 1.15
GHDC-208ENST00000588352 SRP68Q9UHB9 627 aaKnown RBP22.21■■□□□ 1.15
GHDC-208ENST00000588352 NBPF26B4DH59 902 aa22.2■■□□□ 1.14
GHDC-208ENST00000588352 NBPF10Q6P3W6 841 aaKnown RBP22.2■■□□□ 1.14
GHDC-208ENST00000588352 NBPF15Q8N660 670 aa22.2■■□□□ 1.14
GHDC-208ENST00000588352 ZPR1O75312 459 aa22.19■■□□□ 1.14
GHDC-208ENST00000588352 NPM2Q86SE8 214 aaKnown RBP22.19■■□□□ 1.14
GHDC-208ENST00000588352 WDR63Q8IWG1 891 aa22.19■■□□□ 1.14
GHDC-208ENST00000588352 RGL2O15211 777 aa22.18■■□□□ 1.14
GHDC-208ENST00000588352 USPL1Q5W0Q7 1092 aa22.18■■□□□ 1.14
GHDC-208ENST00000588352 ZNF521Q96K83 1311 aa22.17■■□□□ 1.14
GHDC-208ENST00000588352 MMP10P09238 476 aa22.17■■□□□ 1.14
GHDC-208ENST00000588352 FKBP8Q14318 412 aa22.17■■□□□ 1.14
GHDC-208ENST00000588352 KRT24Q2M2I5 525 aa22.17■■□□□ 1.14
GHDC-208ENST00000588352 ZNF330Q9Y3S2 320 aaPredicted RBP22.17■■□□□ 1.14
GHDC-208ENST00000588352 SENP3-EIF4A1A0A087X0R7 540 aa22.16■■□□□ 1.14
GHDC-208ENST00000588352 PIP4K2AP48426 406 aaPredicted RBP22.16■■□□□ 1.14
GHDC-208ENST00000588352 FHDC1Q9C0D6 1143 aaPredicted RBP22.16■■□□□ 1.14
GHDC-208ENST00000588352 BCL2L12Q9HB09 334 aa22.16■■□□□ 1.14
GHDC-208ENST00000588352 CAMTA2O94983 1202 aa22.15■■□□□ 1.14
GHDC-208ENST00000588352 DZIP3Q86Y13 1208 aaKnown RBP22.15■■□□□ 1.14
GHDC-208ENST00000588352 BCORQ6W2J9 1755 aa22.14■■□□□ 1.13
GHDC-208ENST00000588352 HDGFL1Q5TGJ6 251 aa22.13■■□□□ 1.13
GHDC-208ENST00000588352 DUSP27Q5VZP5 1158 aa22.13■■□□□ 1.13
GHDC-208ENST00000588352 LRP10Q7Z4F1 713 aa22.13■■□□□ 1.13
GHDC-208ENST00000588352 SALL2Q9Y467 1007 aaPredicted RBP22.13■■□□□ 1.13
GHDC-208ENST00000588352 C10orf71Q711Q0 1435 aa22.13■■□□□ 1.13
GHDC-208ENST00000588352 FANCIQ9NVI1 1328 aa22.12■■□□□ 1.13
GHDC-208ENST00000588352 EIF2S2P20042 333 aaKnown RBP22.12■■□□□ 1.13
GHDC-208ENST00000588352 PDIA6Q15084 440 aa22.12■■□□□ 1.13
GHDC-208ENST00000588352 TSR2Q969E8 191 aaKnown RBP22.12■■□□□ 1.13
GHDC-208ENST00000588352 TBC1D2BQ9UPU7 963 aa22.12■■□□□ 1.13
GHDC-208ENST00000588352 TM4SF1P30408 202 aa22.11■■□□□ 1.13
GHDC-208ENST00000588352 DDR1Q08345 913 aa22.11■■□□□ 1.13
GHDC-208ENST00000588352 SYT17Q9BSW7 474 aa22.11■■□□□ 1.13
GHDC-208ENST00000588352 ZNF652Q9Y2D9 606 aa22.11■■□□□ 1.13
GHDC-208ENST00000588352 CD2APQ9Y5K6 639 aa22.11■■□□□ 1.13
GHDC-208ENST00000588352 PARP3Q9Y6F1 533 aa22.11■■□□□ 1.13
GHDC-208ENST00000588352 POLRMTO00411 1230 aaKnown RBP22.1■■□□□ 1.13
GHDC-208ENST00000588352 NFIXQ14938 502 aa22.1■■□□□ 1.13
GHDC-208ENST00000588352 CLEC4GQ6UXB4 293 aa22.1■■□□□ 1.13
GHDC-208ENST00000588352 CHMP4AQ9BY43 222 aa22.1■■□□□ 1.13
GHDC-208ENST00000588352 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
GHDC-208ENST00000588352 MYL6BP14649 208 aa22.09■■□□□ 1.13
GHDC-208ENST00000588352 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
GHDC-208ENST00000588352 ERVV-1B6SEH8 477 aa22.08■■□□□ 1.13
GHDC-208ENST00000588352 KIF6Q6ZMV9 814 aa22.08■■□□□ 1.13
GHDC-208ENST00000588352 C8orf58Q8NAV2 365 aa22.08■■□□□ 1.13
GHDC-208ENST00000588352 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
GHDC-208ENST00000588352 DBF4Q9UBU7 674 aaPredicted RBP22.08■■□□□ 1.13
GHDC-208ENST00000588352 CARMIL3Q8ND23 1372 aa22.08■■□□□ 1.12
GHDC-208ENST00000588352 MAP3K15Q6ZN16 1313 aa22.07■■□□□ 1.12
GHDC-208ENST00000588352 ATP10DQ9P241 1426 aa22.07■■□□□ 1.12
GHDC-208ENST00000588352 PROSER3Q2NL68 480 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms