RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 NMRK2Q9NPI5 230 aa19.05■□□□□ 0.64
DNMT1-213ENST00000587604 NARFQ9UHQ1 456 aa19.05■□□□□ 0.64
DNMT1-213ENST00000587604 VSIG10Q8N0Z9 540 aa19.04■□□□□ 0.64
DNMT1-213ENST00000587604 SBF1O95248 1867 aa19.03■□□□□ 0.64
DNMT1-213ENST00000587604 KCPQ6ZWJ8 1503 aa19.02■□□□□ 0.64
DNMT1-213ENST00000587604 NFIXQ14938 502 aa19.02■□□□□ 0.64
DNMT1-213ENST00000587604 CC2D1BQ5T0F9 858 aaKnown RBP19.02■□□□□ 0.64
DNMT1-213ENST00000587604 ZBTB1Q9Y2K1 713 aa19.02■□□□□ 0.64
DNMT1-213ENST00000587604 AFDNP55196 1824 aaKnown RBP19.02■□□□□ 0.63
DNMT1-213ENST00000587604 COL15A1P39059 1388 aa19.01■□□□□ 0.63
DNMT1-213ENST00000587604 RBM46Q8TBY0 533 aaKnown RBP19■□□□□ 0.63
DNMT1-213ENST00000587604 RNF181Q9P0P0 153 aa19■□□□□ 0.63
DNMT1-213ENST00000587604 KDM2BQ8NHM5 1336 aa19■□□□□ 0.63
DNMT1-213ENST00000587604 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
DNMT1-213ENST00000587604 BCL2L12Q9HB09 334 aa18.99■□□□□ 0.63
DNMT1-213ENST00000587604 NRXN2Q9P2S2 1712 aa18.98■□□□□ 0.63
DNMT1-213ENST00000587604 STARD3NLO95772 234 aa18.98■□□□□ 0.63
DNMT1-213ENST00000587604 SERPINB2P05120 415 aa18.98■□□□□ 0.63
DNMT1-213ENST00000587604 TTC5Q8N0Z6 440 aa18.98■□□□□ 0.63
DNMT1-213ENST00000587604 DNAJC5GQ8N7S2 189 aa18.98■□□□□ 0.63
DNMT1-213ENST00000587604 UBR2Q8IWV8 1755 aa18.98■□□□□ 0.63
DNMT1-213ENST00000587604 CANXP27824 592 aaKnown RBP18.97■□□□□ 0.63
DNMT1-213ENST00000587604 NPC1L1Q9UHC9 1359 aa18.96■□□□□ 0.63
DNMT1-213ENST00000587604 EIF5P55010 431 aaKnown RBP18.96■□□□□ 0.63
DNMT1-213ENST00000587604 A0A087WZG4 1122 aa18.95■□□□□ 0.62
DNMT1-213ENST00000587604 FSTL1Q12841 308 aa18.95■□□□□ 0.62
DNMT1-213ENST00000587604 TTLL6Q8N841 843 aa18.95■□□□□ 0.62
DNMT1-213ENST00000587604 IL17REQ8NFR9 667 aa18.95■□□□□ 0.62
DNMT1-213ENST00000587604 GAS2L2Q8NHY3 880 aa18.95■□□□□ 0.62
DNMT1-213ENST00000587604 RRAGCQ9HB90 399 aa18.95■□□□□ 0.62
DNMT1-213ENST00000587604 ZC3H4Q9UPT8 1303 aaKnown RBP18.95■□□□□ 0.62
DNMT1-213ENST00000587604 DLEC1Q9Y238 1755 aa18.94■□□□□ 0.62
DNMT1-213ENST00000587604 GNAT3A8MTJ3 354 aa18.94■□□□□ 0.62
DNMT1-213ENST00000587604 U2SURPO15042 1029 aaKnown RBP18.94■□□□□ 0.62
DNMT1-213ENST00000587604 TEFQ10587 303 aa18.94■□□□□ 0.62
DNMT1-213ENST00000587604 ZNF790Q6PG37 636 aa18.94■□□□□ 0.62
DNMT1-213ENST00000587604 ZNF496Q96IT1 587 aaPredicted RBP18.94■□□□□ 0.62
DNMT1-213ENST00000587604 TEX13AQ9BXU3 409 aaPredicted RBP18.94■□□□□ 0.62
DNMT1-213ENST00000587604 COL3A1P02461 1466 aaPredicted RBP18.93■□□□□ 0.62
DNMT1-213ENST00000587604 H0YIN7 160 aa18.93■□□□□ 0.62
DNMT1-213ENST00000587604 C2CD5Q86YS7 1000 aa18.93■□□□□ 0.62
DNMT1-213ENST00000587604 LMNB1P20700 586 aa18.92■□□□□ 0.62
DNMT1-213ENST00000587604 RASSF7Q02833 373 aa18.92■□□□□ 0.62
DNMT1-213ENST00000587604 CCDC88AQ3V6T2 1871 aa18.92■□□□□ 0.62
DNMT1-213ENST00000587604 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
DNMT1-213ENST00000587604 TNRC6CQ9HCJ0 1690 aaKnown RBP18.92■□□□□ 0.62
DNMT1-213ENST00000587604 WDR90Q96KV7 1748 aa18.91■□□□□ 0.62
DNMT1-213ENST00000587604 BICDL1Q6ZP65 573 aa18.91■□□□□ 0.62
DNMT1-213ENST00000587604 SIPA1L3O60292 1781 aaPredicted RBP18.91■□□□□ 0.62
DNMT1-213ENST00000587604 IL6STP40189 918 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-213ENST00000587604 CNGB1Q14028 1251 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-213ENST00000587604 TBC1D9BQ66K14 1250 aa18.9■□□□□ 0.62
DNMT1-213ENST00000587604 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
DNMT1-213ENST00000587604 CARMIL3Q8ND23 1372 aa18.9■□□□□ 0.62
DNMT1-213ENST00000587604 PRELPP51888 382 aa18.89■□□□□ 0.61
DNMT1-213ENST00000587604 FMNL2Q96PY5 1086 aa18.89■□□□□ 0.61
DNMT1-213ENST00000587604 GLTPD2A6NH11 291 aa18.88■□□□□ 0.61
DNMT1-213ENST00000587604 SMC1BQ8NDV3 1235 aa18.88■□□□□ 0.61
DNMT1-213ENST00000587604 BRIP1Q9BX63 1249 aa18.88■□□□□ 0.61
DNMT1-213ENST00000587604 TBC1D2BQ9UPU7 963 aa18.88■□□□□ 0.61
DNMT1-213ENST00000587604 A1BGP04217 495 aa18.87■□□□□ 0.61
DNMT1-213ENST00000587604 VEGFAP15692 232 aaPredicted RBP18.87■□□□□ 0.61
DNMT1-213ENST00000587604 PDE6BP35913 854 aa18.87■□□□□ 0.61
DNMT1-213ENST00000587604 HTRA3P83110 453 aa18.87■□□□□ 0.61
DNMT1-213ENST00000587604 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
DNMT1-213ENST00000587604 ANKRD31Q8N7Z5 1873 aa18.87■□□□□ 0.61
DNMT1-213ENST00000587604 CEMIPQ8WUJ3 1361 aa18.87■□□□□ 0.61
DNMT1-213ENST00000587604 KLRG1Q96E93 195 aa18.87■□□□□ 0.61
DNMT1-213ENST00000587604 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
DNMT1-213ENST00000587604 BTBD11A6QL63 1104 aa18.86■□□□□ 0.61
DNMT1-213ENST00000587604 NFKBIEO00221 500 aa18.86■□□□□ 0.61
DNMT1-213ENST00000587604 PRR5LQ6MZQ0 368 aa18.86■□□□□ 0.61
DNMT1-213ENST00000587604 ZNF622Q969S3 477 aaKnown RBP eCLIP18.86■□□□□ 0.613e-10■□□□□ 10.5
DNMT1-213ENST00000587604 PHACTR3Q96KR7 559 aa18.86■□□□□ 0.61
DNMT1-213ENST00000587604 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
DNMT1-213ENST00000587604 CFAP53Q96M91 514 aa18.85■□□□□ 0.61
DNMT1-213ENST00000587604 SETDB2Q96T68 719 aa18.85■□□□□ 0.61
DNMT1-213ENST00000587604 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
DNMT1-213ENST00000587604 KCNQ3O43525 872 aa18.84■□□□□ 0.61
DNMT1-213ENST00000587604 JMYQ8N9B5 988 aa18.84■□□□□ 0.61
DNMT1-213ENST00000587604 RSPH6AQ9H0K4 717 aa18.84■□□□□ 0.61
DNMT1-213ENST00000587604 PCNTO95613 3336 aa18.84■□□□□ 0.61
DNMT1-213ENST00000587604 CAMTA2O94983 1202 aa18.83■□□□□ 0.6
DNMT1-213ENST00000587604 CCDC24Q8N4L8 307 aa18.83■□□□□ 0.6
DNMT1-213ENST00000587604 NUDCQ9Y266 331 aa18.83■□□□□ 0.6
DNMT1-213ENST00000587604 DICER1Q9UPY3 1922 aaKnown RBP18.82■□□□□ 0.6
DNMT1-213ENST00000587604 FER1L6Q2WGJ9 1857 aa18.82■□□□□ 0.6
DNMT1-213ENST00000587604 C21orf2O43822 256 aa18.82■□□□□ 0.6
DNMT1-213ENST00000587604 DPY19L2Q6NUT2 758 aa18.82■□□□□ 0.6
DNMT1-213ENST00000587604 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
DNMT1-213ENST00000587604 TIAM2Q8IVF5 1701 aa18.82■□□□□ 0.6
DNMT1-213ENST00000587604 DZIP3Q86Y13 1208 aaKnown RBP18.81■□□□□ 0.6
DNMT1-213ENST00000587604 CNBD1Q8NA66 436 aa18.81■□□□□ 0.6
DNMT1-213ENST00000587604 NPHP1O15259 732 aa18.8■□□□□ 0.6
DNMT1-213ENST00000587604 ST5P78524 1137 aa18.8■□□□□ 0.6
DNMT1-213ENST00000587604 ERFEQ4G0M1 354 aa18.8■□□□□ 0.6
DNMT1-213ENST00000587604 STYK1Q6J9G0 422 aa18.8■□□□□ 0.6
DNMT1-213ENST00000587604 RTF1Q92541 710 aaKnown RBP18.8■□□□□ 0.6
DNMT1-213ENST00000587604 CNKSR1Q969H4 720 aa18.8■□□□□ 0.6
DNMT1-213ENST00000587604 ZNF219Q9P2Y4 722 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms