RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 KCPQ6ZWJ8 1503 aa14.71□□□□□ -0.05
CCDC84-210ENST00000583842 COL5A3P25940 1745 aaPredicted RBP14.71□□□□□ -0.05
CCDC84-210ENST00000583842 MYH14Q7Z406 1995 aaKnown RBP14.71□□□□□ -0.06
CCDC84-210ENST00000583842 CLEC4GQ6UXB4 293 aa14.7□□□□□ -0.06
CCDC84-210ENST00000583842 MCM10Q7L590 875 aa14.7□□□□□ -0.06
CCDC84-210ENST00000583842 MAPK8IP3Q9UPT6 1336 aa14.69□□□□□ -0.06
CCDC84-210ENST00000583842 LMOD3Q0VAK6 560 aa14.69□□□□□ -0.06
CCDC84-210ENST00000583842 FKBP8Q14318 412 aa14.69□□□□□ -0.06
CCDC84-210ENST00000583842 NPM2Q86SE8 214 aaKnown RBP14.69□□□□□ -0.06
CCDC84-210ENST00000583842 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
CCDC84-210ENST00000583842 PDZRN3Q9UPQ7 1066 aa14.69□□□□□ -0.06
CCDC84-210ENST00000583842 ZBTB1Q9Y2K1 713 aa14.69□□□□□ -0.06
CCDC84-210ENST00000583842 USPL1Q5W0Q7 1092 aa14.68□□□□□ -0.06
CCDC84-210ENST00000583842 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
CCDC84-210ENST00000583842 POLRMTO00411 1230 aaKnown RBP14.67□□□□□ -0.06
CCDC84-210ENST00000583842 KCNQ3O43525 872 aa14.67□□□□□ -0.06
CCDC84-210ENST00000583842 YBX3P16989 372 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCDC84-210ENST00000583842 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
CCDC84-210ENST00000583842 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
CCDC84-210ENST00000583842 COL15A1P39059 1388 aa14.66□□□□□ -0.06
CCDC84-210ENST00000583842 GIGYF1O75420 1035 aaPredicted RBP14.66□□□□□ -0.06
CCDC84-210ENST00000583842 TMPOP42166 694 aaKnown RBP14.66□□□□□ -0.06
CCDC84-210ENST00000583842 RIPK4P57078 832 aa14.66□□□□□ -0.06
CCDC84-210ENST00000583842 DCTN1Q14203 1278 aa14.66□□□□□ -0.06
CCDC84-210ENST00000583842 RUNDC1Q96C34 613 aa14.66□□□□□ -0.06
CCDC84-210ENST00000583842 BCL2L12Q9HB09 334 aa14.66□□□□□ -0.06
CCDC84-210ENST00000583842 UBR2Q8IWV8 1755 aa14.65□□□□□ -0.06
CCDC84-210ENST00000583842 A1BGP04217 495 aa14.65□□□□□ -0.06
CCDC84-210ENST00000583842 KCNA3P22001 575 aa14.65□□□□□ -0.06
CCDC84-210ENST00000583842 EIF4A1P60842 406 aaKnown RBP14.65□□□□□ -0.06
CCDC84-210ENST00000583842 NFIXQ14938 502 aa14.65□□□□□ -0.06
CCDC84-210ENST00000583842 TJP1Q07157 1748 aa14.65□□□□□ -0.06
CCDC84-210ENST00000583842 DDR1Q08345 913 aa14.64□□□□□ -0.07
CCDC84-210ENST00000583842 WDR43Q15061 677 aaKnown RBP eCLIP14.64□□□□□ -0.07
CCDC84-210ENST00000583842 NCBP3Q53F19 620 aaKnown RBP14.64□□□□□ -0.07
CCDC84-210ENST00000583842 PIM2Q9P1W9 311 aa14.64□□□□□ -0.07
CCDC84-210ENST00000583842 ADAMTS8Q9UP79 889 aa14.64□□□□□ -0.07
CCDC84-210ENST00000583842 C10orf71Q711Q0 1435 aa14.64□□□□□ -0.07
CCDC84-210ENST00000583842 SIPA1L3O60292 1781 aaPredicted RBP14.63□□□□□ -0.07
CCDC84-210ENST00000583842 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
CCDC84-210ENST00000583842 SERPINB2P05120 415 aa14.63□□□□□ -0.07
CCDC84-210ENST00000583842 ERBB4Q15303 1308 aa14.63□□□□□ -0.07
CCDC84-210ENST00000583842 A0A0G2JLW4 131 aa14.62□□□□□ -0.07
CCDC84-210ENST00000583842 ERVV-1B6SEH8 477 aa14.62□□□□□ -0.07
CCDC84-210ENST00000583842 DPEP1P16444 411 aa14.62□□□□□ -0.07
CCDC84-210ENST00000583842 ZNF784Q8NCA9 323 aaPredicted RBP14.62□□□□□ -0.07
CCDC84-210ENST00000583842 CHL1O00533 1208 aa14.61□□□□□ -0.07
CCDC84-210ENST00000583842 CAMTA2O94983 1202 aa14.61□□□□□ -0.07
CCDC84-210ENST00000583842 PELP1Q8IZL8 1130 aaKnown RBP14.61□□□□□ -0.07
CCDC84-210ENST00000583842 SETDB2Q96T68 719 aa14.61□□□□□ -0.07
CCDC84-210ENST00000583842 BRIP1Q9BX63 1249 aa14.61□□□□□ -0.07
CCDC84-210ENST00000583842 TBC1D2BQ9UPU7 963 aa14.61□□□□□ -0.07
CCDC84-210ENST00000583842 ZNF652Q9Y2D9 606 aa14.61□□□□□ -0.07
CCDC84-210ENST00000583842 VIRMAQ69YN4 1812 aaKnown RBP14.6□□□□□ -0.07
CCDC84-210ENST00000583842 NBPF26B4DH59 902 aa14.6□□□□□ -0.07
CCDC84-210ENST00000583842 NBPF10Q6P3W6 841 aaKnown RBP14.6□□□□□ -0.07
CCDC84-210ENST00000583842 DZIP3Q86Y13 1208 aaKnown RBP14.6□□□□□ -0.07
CCDC84-210ENST00000583842 NBPF15Q8N660 670 aa14.6□□□□□ -0.07
CCDC84-210ENST00000583842 MIS18AQ9NYP9 233 aa14.6□□□□□ -0.07
CCDC84-210ENST00000583842 KIF13BQ9NQT8 1826 aa14.59□□□□□ -0.07
CCDC84-210ENST00000583842 CHD4Q14839 1912 aa14.59□□□□□ -0.07
CCDC84-210ENST00000583842 PXDNLA1KZ92 1463 aa14.59□□□□□ -0.07
CCDC84-210ENST00000583842 C4AP0C0L4 1744 aa14.59□□□□□ -0.07
CCDC84-210ENST00000583842 PDE6BP35913 854 aa14.59□□□□□ -0.07
CCDC84-210ENST00000583842 DALRD3Q5D0E6 543 aaKnown RBP14.59□□□□□ -0.07
CCDC84-210ENST00000583842 UTRNP46939 3433 aa14.59□□□□□ -0.07
CCDC84-210ENST00000583842 PRAMEF22A3QJZ6 481 aa14.58□□□□□ -0.08
CCDC84-210ENST00000583842 CALD1Q05682 793 aaKnown RBP14.58□□□□□ -0.08
CCDC84-210ENST00000583842 TBC1D9BQ66K14 1250 aa14.58□□□□□ -0.08
CCDC84-210ENST00000583842 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.08
CCDC84-210ENST00000583842 CHMP4AQ9BY43 222 aa14.58□□□□□ -0.08
CCDC84-210ENST00000583842 TRIM35Q9UPQ4 493 aa14.58□□□□□ -0.08
CCDC84-210ENST00000583842 KLRG2A4D1S0 409 aaPredicted RBP14.57□□□□□ -0.08
CCDC84-210ENST00000583842 H0YIN7 160 aa14.57□□□□□ -0.08
CCDC84-210ENST00000583842 HOXB7P09629 217 aa14.57□□□□□ -0.08
CCDC84-210ENST00000583842 CFAP44Q96MT7 982 aa14.57□□□□□ -0.08
CCDC84-210ENST00000583842 TSPYL4Q9UJ04 414 aa14.57□□□□□ -0.08
CCDC84-210ENST00000583842 CARMIL3Q8ND23 1372 aa14.57□□□□□ -0.08
CCDC84-210ENST00000583842 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
CCDC84-210ENST00000583842 BCS1LQ9Y276 419 aa14.56□□□□□ -0.08
CCDC84-210ENST00000583842 TTLL6Q8N841 843 aa14.55□□□□□ -0.08
CCDC84-210ENST00000583842 GOLGB1Q14789 3259 aaKnown RBP14.54□□□□□ -0.08
CCDC84-210ENST00000583842 ZNF853P0CG23 659 aa14.54□□□□□ -0.08
CCDC84-210ENST00000583842 CCDC27Q2M243 656 aa14.54□□□□□ -0.08
CCDC84-210ENST00000583842 PRR5LQ6MZQ0 368 aa14.54□□□□□ -0.08
CCDC84-210ENST00000583842 ARHGAP27Q6ZUM4 889 aa14.54□□□□□ -0.08
CCDC84-210ENST00000583842 ANP32CO43423 234 aa14.53□□□□□ -0.08
CCDC84-210ENST00000583842 CCDC146Q8IYE0 955 aa14.53□□□□□ -0.08
CCDC84-210ENST00000583842 ZNF330Q9Y3S2 320 aaPredicted RBP14.53□□□□□ -0.08
CCDC84-210ENST00000583842 NRXN2Q9P2S2 1712 aa14.52□□□□□ -0.08
CCDC84-210ENST00000583842 MAP3K15Q6ZN16 1313 aa14.52□□□□□ -0.08
CCDC84-210ENST00000583842 CHRNA5P30532 468 aa14.52□□□□□ -0.09
CCDC84-210ENST00000583842 ST5P78524 1137 aa14.52□□□□□ -0.09
CCDC84-210ENST00000583842 PDIA6Q15084 440 aa14.52□□□□□ -0.09
CCDC84-210ENST00000583842 NEUROD2Q15784 382 aa14.52□□□□□ -0.09
CCDC84-210ENST00000583842 STYK1Q6J9G0 422 aa14.52□□□□□ -0.09
CCDC84-210ENST00000583842 BICDL1Q6ZP65 573 aa14.52□□□□□ -0.09
CCDC84-210ENST00000583842 LRP10Q7Z4F1 713 aa14.52□□□□□ -0.09
CCDC84-210ENST00000583842 C2CD5Q86YS7 1000 aa14.52□□□□□ -0.09
CCDC84-210ENST00000583842 CNBD1Q8NA66 436 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms