RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
GGA3-214ENST00000582717 BAG4O95429 457 aaKnown RBP16.71■□□□□ 0.27
GGA3-214ENST00000582717 NUCB2P80303 420 aa16.71■□□□□ 0.27
GGA3-214ENST00000582717 EIF2S2P20042 333 aaKnown RBP16.7■□□□□ 0.26
GGA3-214ENST00000582717 ZSCAN30Q86W11 494 aa16.7■□□□□ 0.26
GGA3-214ENST00000582717 HOXB7P09629 217 aa16.7■□□□□ 0.26
GGA3-214ENST00000582717 ZNF445P59923 1031 aa16.7■□□□□ 0.26
GGA3-214ENST00000582717 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
GGA3-214ENST00000582717 DDX49Q9Y6V7 483 aaKnown RBP16.7■□□□□ 0.26
GGA3-214ENST00000582717 SPATA31A3Q5VYP0 1347 aa16.69■□□□□ 0.26
GGA3-214ENST00000582717 C16orf71Q8IYS4 520 aaPredicted RBP16.69■□□□□ 0.26
GGA3-214ENST00000582717 KDM4FA0A1W2PPD8 638 aa16.68■□□□□ 0.26
GGA3-214ENST00000582717 GNAI2P04899 355 aa16.68■□□□□ 0.26
GGA3-214ENST00000582717 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
GGA3-214ENST00000582717 NLRP2Q9NX02 1062 aa16.68■□□□□ 0.26
GGA3-214ENST00000582717 CHPF2Q9P2E5 772 aa16.68■□□□□ 0.26
GGA3-214ENST00000582717 SMARCA5O60264 1052 aaPredicted RBP16.68■□□□□ 0.26
GGA3-214ENST00000582717 GSPT1P15170 499 aaKnown RBP16.68■□□□□ 0.26
GGA3-214ENST00000582717 HS1BP3Q53T59 392 aa16.68■□□□□ 0.26
GGA3-214ENST00000582717 OTUD7AQ8TE49 926 aaPredicted RBP16.68■□□□□ 0.26
GGA3-214ENST00000582717 RBM42Q9BTD8 480 aaKnown RBP16.68■□□□□ 0.26
GGA3-214ENST00000582717 MEGF6O75095 1541 aa16.68■□□□□ 0.26
GGA3-214ENST00000582717 APBB1O00213 710 aa16.67■□□□□ 0.26
GGA3-214ENST00000582717 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
GGA3-214ENST00000582717 HMMRO75330 724 aa16.67■□□□□ 0.26
GGA3-214ENST00000582717 BRINP3Q76B58 766 aa16.67■□□□□ 0.26
GGA3-214ENST00000582717 CWC22Q9HCG8 908 aaKnown RBP16.67■□□□□ 0.26
GGA3-214ENST00000582717 ABCC6O95255 1503 aa16.67■□□□□ 0.26
GGA3-214ENST00000582717 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
GGA3-214ENST00000582717 TERF1P54274 439 aa16.66■□□□□ 0.26
GGA3-214ENST00000582717 ANXA1P04083 346 aa16.66■□□□□ 0.26
GGA3-214ENST00000582717 CYP2E1P05181 493 aaPredicted RBP16.66■□□□□ 0.26
GGA3-214ENST00000582717 GNAI3P08754 354 aa16.66■□□□□ 0.26
GGA3-214ENST00000582717 RAPGEF4Q8WZA2 1011 aa16.66■□□□□ 0.26
GGA3-214ENST00000582717 KDM6AO15550 1401 aaPredicted RBP16.65■□□□□ 0.26
GGA3-214ENST00000582717 HEG1Q9ULI3 1381 aa16.65■□□□□ 0.26
GGA3-214ENST00000582717 TTC22Q5TAA0 569 aa16.65■□□□□ 0.26
GGA3-214ENST00000582717 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.65■□□□□ 0.26
GGA3-214ENST00000582717 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
GGA3-214ENST00000582717 ZNF335Q9H4Z2 1342 aaPredicted RBP16.64■□□□□ 0.25
GGA3-214ENST00000582717 OFD1O75665 1012 aa16.64■□□□□ 0.25
GGA3-214ENST00000582717 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
GGA3-214ENST00000582717 LRRFIP2Q9Y608 721 aaKnown RBP16.64■□□□□ 0.25
GGA3-214ENST00000582717 CPDO75976 1380 aa16.64■□□□□ 0.25
GGA3-214ENST00000582717 PNMA6EA0A0J9YXQ4 647 aa16.63■□□□□ 0.25
GGA3-214ENST00000582717 PRAMEF22A3QJZ6 481 aa16.63■□□□□ 0.25
GGA3-214ENST00000582717 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
GGA3-214ENST00000582717 TATP17735 454 aaPredicted RBP16.63■□□□□ 0.25
GGA3-214ENST00000582717 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
GGA3-214ENST00000582717 ATP8B2P98198 1209 aa16.62■□□□□ 0.25
GGA3-214ENST00000582717 CASC1Q6TDU7 716 aa16.62■□□□□ 0.25
GGA3-214ENST00000582717 USP26Q9BXU7 913 aa16.62■□□□□ 0.25
GGA3-214ENST00000582717 EXOC6BQ9Y2D4 811 aa16.62■□□□□ 0.25
GGA3-214ENST00000582717 ADCY9O60503 1353 aa16.62■□□□□ 0.25
GGA3-214ENST00000582717 PKD1L3Q7Z443 1732 aa16.62■□□□□ 0.25
GGA3-214ENST00000582717 PHKG2P15735 406 aa16.62■□□□□ 0.25
GGA3-214ENST00000582717 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
GGA3-214ENST00000582717 PI4KAP2A4QPH2 592 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 UBTFL1P0CB47 393 aaPredicted RBP16.61■□□□□ 0.25
GGA3-214ENST00000582717 PROSER3Q2NL68 480 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 PI4KAP1Q8N8J0 262 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 CHMP4AQ9BY43 222 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 SRCIN1Q9C0H9 1055 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 C5P01031 1676 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 ST18O60284 1047 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 ZSCAN23Q3MJ62 389 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 DNAAF4Q8WXU2 420 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 PDCL3Q9H2J4 239 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 DBF4Q9UBU7 674 aaPredicted RBP16.61■□□□□ 0.25
GGA3-214ENST00000582717 SPG7Q9UQ90 795 aa16.61■□□□□ 0.25
GGA3-214ENST00000582717 BEND3Q5T5X7 828 aa16.6■□□□□ 0.25
GGA3-214ENST00000582717 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
GGA3-214ENST00000582717 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■□□□□ 11
GGA3-214ENST00000582717 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
GGA3-214ENST00000582717 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
GGA3-214ENST00000582717 PDLIM2Q96JY6 352 aa16.59■□□□□ 0.25
GGA3-214ENST00000582717 SLAIN2Q9P270 581 aa16.59■□□□□ 0.25
GGA3-214ENST00000582717 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
GGA3-214ENST00000582717 VSIG10Q8N0Z9 540 aa16.58■□□□□ 0.25
GGA3-214ENST00000582717 ABCA3Q99758 1704 aa16.58■□□□□ 0.25
GGA3-214ENST00000582717 CYP27B1O15528 508 aa16.58■□□□□ 0.24
GGA3-214ENST00000582717 REC8O95072 547 aa16.58■□□□□ 0.24
GGA3-214ENST00000582717 MRC1P22897 1456 aa16.58■□□□□ 0.24
GGA3-214ENST00000582717 IFNL2Q8IZJ0 200 aa16.58■□□□□ 0.24
GGA3-214ENST00000582717 NBPF7P0C2Y1 421 aaPredicted RBP16.57■□□□□ 0.24
GGA3-214ENST00000582717 SDSP20132 328 aa16.57■□□□□ 0.24
GGA3-214ENST00000582717 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
GGA3-214ENST00000582717 NOL7Q9UMY1 257 aaKnown RBP16.57■□□□□ 0.24
GGA3-214ENST00000582717 AK9Q5TCS8 1911 aa16.57■□□□□ 0.24
GGA3-214ENST00000582717 PLEKHG2Q9H7P9 1386 aa16.57■□□□□ 0.24
GGA3-214ENST00000582717 SALL3Q9BXA9 1300 aa16.57■□□□□ 0.24
GGA3-214ENST00000582717 ZNF500O60304 480 aaPredicted RBP16.57■□□□□ 0.24
GGA3-214ENST00000582717 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
GGA3-214ENST00000582717 PKNOX2Q96KN3 472 aa16.57■□□□□ 0.24
GGA3-214ENST00000582717 TUBGCP6Q96RT7 1819 aa16.57■□□□□ 0.24
GGA3-214ENST00000582717 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
GGA3-214ENST00000582717 MCM5P33992 734 aa16.56■□□□□ 0.24
GGA3-214ENST00000582717 PDE1AP54750 535 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms