RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 LINC00116Q8NCU8 138 aa15.73■□□□□ 0.11
SNRPD1-204ENST00000582475 ANO8Q9HCE9 1232 aaPredicted RBP15.73■□□□□ 0.11
SNRPD1-204ENST00000582475 TSPYL4Q9UJ04 414 aa15.73■□□□□ 0.11
SNRPD1-204ENST00000582475 RGPD3A6NKT7 1758 aaPredicted RBP15.72■□□□□ 0.11
SNRPD1-204ENST00000582475 RGPD4Q7Z3J3 1758 aa15.72■□□□□ 0.11
SNRPD1-204ENST00000582475 CHL1O00533 1208 aa15.72■□□□□ 0.11
SNRPD1-204ENST00000582475 R3HDM1Q15032 1099 aaKnown RBP15.72■□□□□ 0.11
SNRPD1-204ENST00000582475 DNAJC10Q8IXB1 793 aa15.72■□□□□ 0.11
SNRPD1-204ENST00000582475 CFAP44Q96MT7 982 aa15.72■□□□□ 0.11
SNRPD1-204ENST00000582475 LY75O60449 1722 aa15.71■□□□□ 0.11
SNRPD1-204ENST00000582475 EIF4A1P60842 406 aaKnown RBP15.71■□□□□ 0.11
SNRPD1-204ENST00000582475 ZNF827Q17R98 1081 aa15.71■□□□□ 0.11
SNRPD1-204ENST00000582475 TEX13AQ9BXU3 409 aaPredicted RBP15.71■□□□□ 0.11
SNRPD1-204ENST00000582475 FARP1Q9Y4F1 1045 aaPredicted RBP15.71■□□□□ 0.11
SNRPD1-204ENST00000582475 PSDA5PKW4 1024 aaPredicted RBP15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 SNRPA1P09661 255 aaKnown RBP15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 GNAI1P63096 354 aa15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 RC3H1Q5TC82 1133 aaKnown RBP15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 IFT57Q9NWB7 429 aa15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 TFCP2L1Q9NZI6 479 aa15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 HEG1Q9ULI3 1381 aa15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 RREB1Q92766 1687 aa15.7■□□□□ 0.1
SNRPD1-204ENST00000582475 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
SNRPD1-204ENST00000582475 AK7Q96M32 723 aa15.69■□□□□ 0.1
SNRPD1-204ENST00000582475 SIPA1L3O60292 1781 aaPredicted RBP15.69■□□□□ 0.1
SNRPD1-204ENST00000582475 STARD3NLO95772 234 aa15.68■□□□□ 0.1
SNRPD1-204ENST00000582475 CYP19A1P11511 503 aaPredicted RBP15.68■□□□□ 0.1
SNRPD1-204ENST00000582475 USP16Q9Y5T5 823 aa15.68■□□□□ 0.1
SNRPD1-204ENST00000582475 KCPQ6ZWJ8 1503 aa15.68■□□□□ 0.1
SNRPD1-204ENST00000582475 PRAMEF22A3QJZ6 481 aa15.67■□□□□ 0.1
SNRPD1-204ENST00000582475 CRKLP46109 303 aaKnown RBP15.67■□□□□ 0.1
SNRPD1-204ENST00000582475 MBIPQ9NS73 344 aa15.67■□□□□ 0.1
SNRPD1-204ENST00000582475 NUP188Q5SRE5 1749 aa15.67■□□□□ 0.1
SNRPD1-204ENST00000582475 GIGYF1O75420 1035 aaPredicted RBP15.66■□□□□ 0.1
SNRPD1-204ENST00000582475 INTS5Q6P9B9 1019 aaKnown RBP15.66■□□□□ 0.1
SNRPD1-204ENST00000582475 CREBZFQ9NS37 354 aa15.66■□□□□ 0.1
SNRPD1-204ENST00000582475 IL16Q14005 1332 aa15.66■□□□□ 0.1
SNRPD1-204ENST00000582475 CNTNAP4Q9C0A0 1308 aa15.66■□□□□ 0.1
SNRPD1-204ENST00000582475 GNPATO15228 680 aa15.65■□□□□ 0.1
SNRPD1-204ENST00000582475 RPS6KA4O75676 772 aa15.65■□□□□ 0.1
SNRPD1-204ENST00000582475 SMIM5Q71RC9 77 aa15.65■□□□□ 0.1
SNRPD1-204ENST00000582475 FLAD1Q8NFF5 587 aa15.65■□□□□ 0.1
SNRPD1-204ENST00000582475 RTCBQ9Y3I0 505 aaKnown RBP15.65■□□□□ 0.1
SNRPD1-204ENST00000582475 PAPPAQ13219 1627 aa15.65■□□□□ 0.1
SNRPD1-204ENST00000582475 A1BGP04217 495 aa15.64■□□□□ 0.09
SNRPD1-204ENST00000582475 TRAPPC3LQ5T215 181 aa15.64■□□□□ 0.09
SNRPD1-204ENST00000582475 COL23A1Q86Y22 540 aaPredicted RBP15.64■□□□□ 0.09
SNRPD1-204ENST00000582475 CCDC87Q9NVE4 849 aa15.64■□□□□ 0.09
SNRPD1-204ENST00000582475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.63■□□□□ 0.09
SNRPD1-204ENST00000582475 PHF14O94880 888 aa15.63■□□□□ 0.09
SNRPD1-204ENST00000582475 CANXP27824 592 aaKnown RBP15.63■□□□□ 0.09
SNRPD1-204ENST00000582475 AMIGO3Q86WK7 504 aa15.63■□□□□ 0.09
SNRPD1-204ENST00000582475 PDGFDQ9GZP0 370 aaPredicted RBP15.63■□□□□ 0.09
SNRPD1-204ENST00000582475 PNPLA7Q6ZV29 1317 aa15.63■□□□□ 0.09
SNRPD1-204ENST00000582475 ZNF521Q96K83 1311 aa15.63■□□□□ 0.09
SNRPD1-204ENST00000582475 TAF1LQ8IZX4 1826 aa15.62■□□□□ 0.09
SNRPD1-204ENST00000582475 EIF2S2P20042 333 aaKnown RBP15.62■□□□□ 0.09
SNRPD1-204ENST00000582475 SSFA2P28290 1259 aa15.62■□□□□ 0.09
SNRPD1-204ENST00000582475 KRT24Q2M2I5 525 aa15.62■□□□□ 0.09
SNRPD1-204ENST00000582475 TSR2Q969E8 191 aaKnown RBP15.62■□□□□ 0.09
SNRPD1-204ENST00000582475 ZBTB1Q9Y2K1 713 aa15.62■□□□□ 0.09
SNRPD1-204ENST00000582475 ZNF831Q5JPB2 1677 aa15.62■□□□□ 0.09
SNRPD1-204ENST00000582475 UBR2Q8IWV8 1755 aa15.62■□□□□ 0.09
SNRPD1-204ENST00000582475 C4BP0C0L5 1744 aa15.61■□□□□ 0.09
SNRPD1-204ENST00000582475 HNRNPUQ00839 825 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNRPD1-204ENST00000582475 GOLGA2Q08379 1002 aa15.61■□□□□ 0.09
SNRPD1-204ENST00000582475 DUSP27Q5VZP5 1158 aa15.61■□□□□ 0.09
SNRPD1-204ENST00000582475 ARHGEF1Q92888 912 aaKnown RBP15.61■□□□□ 0.09
SNRPD1-204ENST00000582475 C5P01031 1676 aa15.6■□□□□ 0.09
SNRPD1-204ENST00000582475 KDM3BQ7LBC6 1761 aa15.6■□□□□ 0.09
SNRPD1-204ENST00000582475 ELL2O00472 640 aaPredicted RBP15.6■□□□□ 0.09
SNRPD1-204ENST00000582475 C8orf58Q8NAV2 365 aa15.6■□□□□ 0.09
SNRPD1-204ENST00000582475 SLC16A10Q8TF71 515 aa15.6■□□□□ 0.09
SNRPD1-204ENST00000582475 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
SNRPD1-204ENST00000582475 MYH14Q7Z406 1995 aaKnown RBP15.6■□□□□ 0.09
SNRPD1-204ENST00000582475 HOXB7P09629 217 aa15.59■□□□□ 0.09
SNRPD1-204ENST00000582475 RFC4P35249 363 aa15.59■□□□□ 0.09
SNRPD1-204ENST00000582475 IL6STP40189 918 aaPredicted RBP15.59■□□□□ 0.09
SNRPD1-204ENST00000582475 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
SNRPD1-204ENST00000582475 EIF5P55010 431 aaKnown RBP15.59■□□□□ 0.09
SNRPD1-204ENST00000582475 NPM2Q86SE8 214 aaKnown RBP15.59■□□□□ 0.09
SNRPD1-204ENST00000582475 SOS1Q07889 1333 aaPredicted RBP15.59■□□□□ 0.09
SNRPD1-204ENST00000582475 TJP1Q07157 1748 aa15.59■□□□□ 0.09
SNRPD1-204ENST00000582475 NBPF26B4DH59 902 aa15.58■□□□□ 0.08
SNRPD1-204ENST00000582475 E9PSI1 815 aa15.58■□□□□ 0.08
SNRPD1-204ENST00000582475 ZBTB7AO95365 584 aa15.58■□□□□ 0.08
SNRPD1-204ENST00000582475 SLFN5Q08AF3 891 aa15.58■□□□□ 0.08
SNRPD1-204ENST00000582475 NBPF10Q6P3W6 841 aaKnown RBP15.58■□□□□ 0.08
SNRPD1-204ENST00000582475 NBPF15Q8N660 670 aa15.58■□□□□ 0.08
SNRPD1-204ENST00000582475 NECTIN2Q92692 538 aa15.58■□□□□ 0.08
SNRPD1-204ENST00000582475 A0A087WZG4 1122 aa15.57■□□□□ 0.08
SNRPD1-204ENST00000582475 CD44P16070 742 aaKnown RBP15.57■□□□□ 0.08
SNRPD1-204ENST00000582475 TSPYL6Q8N831 410 aa15.57■□□□□ 0.08
SNRPD1-204ENST00000582475 CDCA7LQ96GN5 454 aa15.57■□□□□ 0.08
SNRPD1-204ENST00000582475 ZNF330Q9Y3S2 320 aaPredicted RBP15.57■□□□□ 0.08
SNRPD1-204ENST00000582475 FANCIQ9NVI1 1328 aa15.57■□□□□ 0.08
SNRPD1-204ENST00000582475 COL5A3P25940 1745 aaPredicted RBP15.57■□□□□ 0.08
SNRPD1-204ENST00000582475 EXOSC9Q06265 439 aaKnown RBP15.56■□□□□ 0.08
SNRPD1-204ENST00000582475 HDGFL1Q5TGJ6 251 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms