RNA–Protein interactions for RNA: ENST00000582100.1

CCDC57-215, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-215ENST00000582100 TM4SF1P30408 202 aa20.51■□□□□ 0.87
CCDC57-215ENST00000582100 DDR1Q08345 913 aa20.51■□□□□ 0.87
CCDC57-215ENST00000582100 USPL1Q5W0Q7 1092 aa20.51■□□□□ 0.87
CCDC57-215ENST00000582100 TEX13AQ9BXU3 409 aaPredicted RBP20.51■□□□□ 0.87
CCDC57-215ENST00000582100 NARFQ9UHQ1 456 aa20.51■□□□□ 0.87
CCDC57-215ENST00000582100 COL15A1P39059 1388 aa20.5■□□□□ 0.87
CCDC57-215ENST00000582100 N4BP2Q86UW6 1770 aaPredicted RBP20.5■□□□□ 0.87
CCDC57-215ENST00000582100 DPEP1P16444 411 aa20.49■□□□□ 0.87
CCDC57-215ENST00000582100 BTBD11A6QL63 1104 aa20.48■□□□□ 0.87
CCDC57-215ENST00000582100 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
CCDC57-215ENST00000582100 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
CCDC57-215ENST00000582100 RTF1Q92541 710 aaKnown RBP20.48■□□□□ 0.87
CCDC57-215ENST00000582100 FMNL2Q96PY5 1086 aa20.48■□□□□ 0.87
CCDC57-215ENST00000582100 HTATSF1O43719 755 aaKnown RBP20.47■□□□□ 0.87
CCDC57-215ENST00000582100 KCNA3P22001 575 aa20.47■□□□□ 0.87
CCDC57-215ENST00000582100 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
CCDC57-215ENST00000582100 C1QTNF8P60827 252 aa20.47■□□□□ 0.87
CCDC57-215ENST00000582100 BCS1LQ9Y276 419 aa20.47■□□□□ 0.87
CCDC57-215ENST00000582100 ADCY9O60503 1353 aa20.46■□□□□ 0.87
CCDC57-215ENST00000582100 A0A087WZG4 1122 aa20.46■□□□□ 0.87
CCDC57-215ENST00000582100 GIGYF1O75420 1035 aaPredicted RBP20.46■□□□□ 0.87
CCDC57-215ENST00000582100 BCL2L12Q9HB09 334 aa20.46■□□□□ 0.87
CCDC57-215ENST00000582100 ATP10DQ9P241 1426 aa20.45■□□□□ 0.86
CCDC57-215ENST00000582100 NFIXQ14938 502 aa20.45■□□□□ 0.86
CCDC57-215ENST00000582100 BRCA1P38398 1863 aaKnown RBP20.44■□□□□ 0.86
CCDC57-215ENST00000582100 KCNQ3O43525 872 aa20.44■□□□□ 0.86
CCDC57-215ENST00000582100 MCM10Q7L590 875 aa20.44■□□□□ 0.86
CCDC57-215ENST00000582100 PIM2Q9P1W9 311 aa20.44■□□□□ 0.86
CCDC57-215ENST00000582100 IL6STP40189 918 aaPredicted RBP20.43■□□□□ 0.86
CCDC57-215ENST00000582100 NEFMP07197 916 aa20.42■□□□□ 0.86
CCDC57-215ENST00000582100 DCTN1Q14203 1278 aa20.41■□□□□ 0.86
CCDC57-215ENST00000582100 A1BGP04217 495 aa20.4■□□□□ 0.86
CCDC57-215ENST00000582100 SERPINB2P05120 415 aa20.4■□□□□ 0.86
CCDC57-215ENST00000582100 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
CCDC57-215ENST00000582100 ARHGAP27Q6ZUM4 889 aa20.4■□□□□ 0.86
CCDC57-215ENST00000582100 PLEKHF1Q96S99 279 aa20.4■□□□□ 0.86
CCDC57-215ENST00000582100 GPBP1L1Q9HC44 474 aaPredicted RBP20.4■□□□□ 0.86
CCDC57-215ENST00000582100 NRXN2Q9P2S2 1712 aa20.4■□□□□ 0.86
CCDC57-215ENST00000582100 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
CCDC57-215ENST00000582100 SNRPA1P09661 255 aaKnown RBP20.39■□□□□ 0.85
CCDC57-215ENST00000582100 CHRNA5P30532 468 aa20.39■□□□□ 0.85
CCDC57-215ENST00000582100 RALBP1Q15311 655 aa20.39■□□□□ 0.85
CCDC57-215ENST00000582100 TAF7Q15545 349 aaPredicted RBP20.39■□□□□ 0.85
CCDC57-215ENST00000582100 PNNQ9H307 717 aaKnown RBP20.39■□□□□ 0.85
CCDC57-215ENST00000582100 USP16Q9Y5T5 823 aa20.39■□□□□ 0.85
CCDC57-215ENST00000582100 ARFGEF1Q9Y6D6 1849 aa20.39■□□□□ 0.85
CCDC57-215ENST00000582100 NPM2Q86SE8 214 aaKnown RBP20.38■□□□□ 0.85
CCDC57-215ENST00000582100 TBC1D2BQ9UPU7 963 aa20.38■□□□□ 0.85
CCDC57-215ENST00000582100 ZNF330Q9Y3S2 320 aaPredicted RBP20.38■□□□□ 0.85
CCDC57-215ENST00000582100 TBC1D9BQ66K14 1250 aa20.36■□□□□ 0.85
CCDC57-215ENST00000582100 BICDL1Q6ZP65 573 aa20.36■□□□□ 0.85
CCDC57-215ENST00000582100 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
CCDC57-215ENST00000582100 PRAMEF22A3QJZ6 481 aa20.35■□□□□ 0.85
CCDC57-215ENST00000582100 NFE2L2Q16236 605 aa20.35■□□□□ 0.85
CCDC57-215ENST00000582100 ZNF526Q8TF50 670 aaPredicted RBP20.35■□□□□ 0.85
CCDC57-215ENST00000582100 DLG5Q8TDM6 1919 aa20.34■□□□□ 0.85
CCDC57-215ENST00000582100 CAMTA2O94983 1202 aa20.34■□□□□ 0.85
CCDC57-215ENST00000582100 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
CCDC57-215ENST00000582100 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
CCDC57-215ENST00000582100 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.85
CCDC57-215ENST00000582100 DZIP3Q86Y13 1208 aaKnown RBP20.33■□□□□ 0.85
CCDC57-215ENST00000582100 CARMIL3Q8ND23 1372 aa20.33■□□□□ 0.84
CCDC57-215ENST00000582100 MIS18AQ9NYP9 233 aa20.32■□□□□ 0.84
CCDC57-215ENST00000582100 MAPK8IP3Q9UPT6 1336 aa20.31■□□□□ 0.84
CCDC57-215ENST00000582100 H0YIN7 160 aa20.31■□□□□ 0.84
CCDC57-215ENST00000582100 PIP4K2AP48426 406 aaPredicted RBP20.31■□□□□ 0.84
CCDC57-215ENST00000582100 CLEC4GQ6UXB4 293 aa20.31■□□□□ 0.84
CCDC57-215ENST00000582100 C2CD5Q86YS7 1000 aa20.31■□□□□ 0.84
CCDC57-215ENST00000582100 SETDB2Q96T68 719 aa20.31■□□□□ 0.84
CCDC57-215ENST00000582100 PDZRN3Q9UPQ7 1066 aa20.31■□□□□ 0.84
CCDC57-215ENST00000582100 C9orf131Q5VYM1 1079 aa20.3■□□□□ 0.84
CCDC57-215ENST00000582100 TTLL6Q8N841 843 aa20.3■□□□□ 0.84
CCDC57-215ENST00000582100 BRIP1Q9BX63 1249 aa20.3■□□□□ 0.84
CCDC57-215ENST00000582100 BCORQ6W2J9 1755 aa20.29■□□□□ 0.84
CCDC57-215ENST00000582100 DLEC1Q9Y238 1755 aa20.29■□□□□ 0.84
CCDC57-215ENST00000582100 NBPF26B4DH59 902 aa20.29■□□□□ 0.84
CCDC57-215ENST00000582100 RGL2O15211 777 aa20.29■□□□□ 0.84
CCDC57-215ENST00000582100 PDE6BP35913 854 aa20.29■□□□□ 0.84
CCDC57-215ENST00000582100 PRR5LQ6MZQ0 368 aa20.29■□□□□ 0.84
CCDC57-215ENST00000582100 NBPF10Q6P3W6 841 aaKnown RBP20.29■□□□□ 0.84
CCDC57-215ENST00000582100 NBPF15Q8N660 670 aa20.29■□□□□ 0.84
CCDC57-215ENST00000582100 MYBBP1AQ9BQG0 1328 aaKnown RBP20.28■□□□□ 0.84
CCDC57-215ENST00000582100 ZNF652Q9Y2D9 606 aa20.28■□□□□ 0.84
CCDC57-215ENST00000582100 KDM3BQ7LBC6 1761 aa20.27■□□□□ 0.84
CCDC57-215ENST00000582100 KIF3CO14782 793 aa20.27■□□□□ 0.84
CCDC57-215ENST00000582100 EIF4A1P60842 406 aaKnown RBP20.27■□□□□ 0.84
CCDC57-215ENST00000582100 THUMPD2Q9BTF0 503 aaKnown RBP20.27■□□□□ 0.84
CCDC57-215ENST00000582100 CNBD1Q8NA66 436 aa20.26■□□□□ 0.83
CCDC57-215ENST00000582100 ANKRD31Q8N7Z5 1873 aa20.26■□□□□ 0.83
CCDC57-215ENST00000582100 ST5P78524 1137 aa20.25■□□□□ 0.83
CCDC57-215ENST00000582100 CCDC24Q8N4L8 307 aa20.25■□□□□ 0.83
CCDC57-215ENST00000582100 RNF181Q9P0P0 153 aa20.25■□□□□ 0.83
CCDC57-215ENST00000582100 LAMB4A4D0S4 1761 aa20.25■□□□□ 0.83
CCDC57-215ENST00000582100 SBF1O95248 1867 aa20.24■□□□□ 0.83
CCDC57-215ENST00000582100 NPHP1O15259 732 aa20.24■□□□□ 0.83
CCDC57-215ENST00000582100 RIPK4P57078 832 aa20.24■□□□□ 0.83
CCDC57-215ENST00000582100 ZNF622Q969S3 477 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC57-215ENST00000582100 TMPOP42166 694 aaKnown RBP20.22■□□□□ 0.83
CCDC57-215ENST00000582100 NBPF5PQ86XG9 351 aaPredicted RBP20.22■□□□□ 0.83
CCDC57-215ENST00000582100 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms