RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
RNF43-205ENST00000581868 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
RNF43-205ENST00000581868 HSPA4P34932 840 aa16.57■□□□□ 0.24
RNF43-205ENST00000581868 GLIPR1L2Q4G1C9 344 aa16.57■□□□□ 0.24
RNF43-205ENST00000581868 USP48Q86UV5 1035 aa16.57■□□□□ 0.24
RNF43-205ENST00000581868 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
RNF43-205ENST00000581868 RHPN1Q8TCX5 695 aa16.57■□□□□ 0.24
RNF43-205ENST00000581868 ZKSCAN5Q9Y2L8 839 aa16.56■□□□□ 0.24
RNF43-205ENST00000581868 NBPF7P0C2Y1 421 aaPredicted RBP16.56■□□□□ 0.24
RNF43-205ENST00000581868 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
RNF43-205ENST00000581868 WDR33Q9C0J8 1336 aaKnown RBP16.55■□□□□ 0.24
RNF43-205ENST00000581868 RAB11FIP3O75154 756 aa16.55■□□□□ 0.24
RNF43-205ENST00000581868 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
RNF43-205ENST00000581868 PI4K2BQ8TCG2 481 aa16.55■□□□□ 0.24
RNF43-205ENST00000581868 XRN1Q8IZH2 1706 aaKnown RBP16.55■□□□□ 0.24
RNF43-205ENST00000581868 AOX1Q06278 1338 aa16.55■□□□□ 0.24
RNF43-205ENST00000581868 ZNF500O60304 480 aaPredicted RBP16.55■□□□□ 0.24
RNF43-205ENST00000581868 PTMAP06454 111 aaKnown RBP16.54■□□□□ 0.24
RNF43-205ENST00000581868 CWC27Q6UX04 472 aaKnown RBP16.54■□□□□ 0.24
RNF43-205ENST00000581868 CCDC39Q9UFE4 941 aa16.54■□□□□ 0.24
RNF43-205ENST00000581868 SNX14Q9Y5W7 946 aa16.54■□□□□ 0.24
RNF43-205ENST00000581868 SGSM2O43147 1006 aa16.54■□□□□ 0.24
RNF43-205ENST00000581868 DTNBO60941 627 aa16.54■□□□□ 0.24
RNF43-205ENST00000581868 ANXA1P04083 346 aa16.54■□□□□ 0.24
RNF43-205ENST00000581868 SPG7Q9UQ90 795 aa16.54■□□□□ 0.24
RNF43-205ENST00000581868 FAM208AQ9UK61 1670 aaKnown RBP16.53■□□□□ 0.24
RNF43-205ENST00000581868 POLA2Q14181 598 aa16.53■□□□□ 0.24
RNF43-205ENST00000581868 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
RNF43-205ENST00000581868 KIF1BPQ96EK5 621 aa16.53■□□□□ 0.24
RNF43-205ENST00000581868 TUBGCP6Q96RT7 1819 aa16.53■□□□□ 0.24
RNF43-205ENST00000581868 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
RNF43-205ENST00000581868 RBM10P98175 930 aaKnown RBP16.53■□□□□ 0.24
RNF43-205ENST00000581868 OS9Q13438 667 aaPredicted RBP16.53■□□□□ 0.24
RNF43-205ENST00000581868 MPNDQ8N594 471 aa16.53■□□□□ 0.24
RNF43-205ENST00000581868 PI4KAP2A4QPH2 592 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 CPA1P15085 419 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 AK2P54819 239 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 PI4KAP1Q8N8J0 262 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 IL17RAQ96F46 866 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 LGR6Q9HBX8 967 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 CNPY2Q9Y2B0 182 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 RAD50Q92878 1312 aa16.52■□□□□ 0.24
RNF43-205ENST00000581868 LSG1Q9H089 658 aaKnown RBP16.52■□□□□ 0.23
RNF43-205ENST00000581868 RGPD8O14715 1765 aaPredicted RBP16.51■□□□□ 0.23
RNF43-205ENST00000581868 KCNQ3O43525 872 aa16.51■□□□□ 0.23
RNF43-205ENST00000581868 BABAM1Q9NWV8 329 aa16.51■□□□□ 0.23
RNF43-205ENST00000581868 RPAP1Q9BWH6 1393 aaPredicted RBP16.51■□□□□ 0.23
RNF43-205ENST00000581868 PHF14O94880 888 aa16.5■□□□□ 0.23
RNF43-205ENST00000581868 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
RNF43-205ENST00000581868 DNAAF4Q8WXU2 420 aa16.5■□□□□ 0.23
RNF43-205ENST00000581868 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
RNF43-205ENST00000581868 PIK3C2AO00443 1686 aa16.5■□□□□ 0.23
RNF43-205ENST00000581868 RUFY3Q7L099 469 aa16.5■□□□□ 0.23
RNF43-205ENST00000581868 PXDNLA1KZ92 1463 aa16.5■□□□□ 0.23
RNF43-205ENST00000581868 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 EIF4A1P60842 406 aaKnown RBP16.49■□□□□ 0.23
RNF43-205ENST00000581868 BEND3Q5T5X7 828 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 TTC14Q96N46 770 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 LRRC37A3O60309 1634 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 DIP2AQ14689 1571 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 EPB41L2O43491 1005 aaKnown RBP16.49■□□□□ 0.23
RNF43-205ENST00000581868 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
RNF43-205ENST00000581868 CASTP20810 708 aaKnown RBP16.49■□□□□ 0.23
RNF43-205ENST00000581868 SYT1P21579 422 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 MCM5P33992 734 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 LIMCH1Q9UPQ0 1083 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 SMC3Q9UQE7 1217 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 STX6O43752 255 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 DIAPH3Q9NSV4 1193 aa16.49■□□□□ 0.23
RNF43-205ENST00000581868 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
RNF43-205ENST00000581868 FAM13BQ9NYF5 915 aa16.48■□□□□ 0.23
RNF43-205ENST00000581868 NWD1Q149M9 1564 aa16.48■□□□□ 0.23
RNF43-205ENST00000581868 UQCRHLA0A096LP55 91 aa16.48■□□□□ 0.23
RNF43-205ENST00000581868 FIBPO43427 364 aa16.48■□□□□ 0.23
RNF43-205ENST00000581868 UQCRHP07919 91 aa16.48■□□□□ 0.23
RNF43-205ENST00000581868 CSPP1Q1MSJ5 1256 aa16.48■□□□□ 0.23
RNF43-205ENST00000581868 LARGE1O95461 756 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 TERF1P54274 439 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 NBPF6Q5VWK0 638 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 NBPF4Q96M43 638 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.47■□□□□ 0.23
RNF43-205ENST00000581868 KCNA6P17658 529 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 PTH1RQ03431 593 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 CCDC183Q5T5S1 534 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 CCDC83Q8IWF9 413 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 PDCL3Q9H2J4 239 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 USP25Q9UHP3 1055 aa16.47■□□□□ 0.23
RNF43-205ENST00000581868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
RNF43-205ENST00000581868 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
RNF43-205ENST00000581868 PRPF40BQ6NWY9 871 aaKnown RBP16.46■□□□□ 0.23
RNF43-205ENST00000581868 ZNF830Q96NB3 372 aaPredicted RBP16.46■□□□□ 0.23
RNF43-205ENST00000581868 GLRX3O76003 335 aaKnown RBP16.46■□□□□ 0.22
RNF43-205ENST00000581868 TEFQ10587 303 aa16.46■□□□□ 0.22
RNF43-205ENST00000581868 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.22
RNF43-205ENST00000581868 JAKMIP1Q96N16 626 aaKnown RBP16.46■□□□□ 0.22
RNF43-205ENST00000581868 PA2G4Q9UQ80 394 aaKnown RBP16.46■□□□□ 0.22
RNF43-205ENST00000581868 TCHHQ07283 1943 aa16.45■□□□□ 0.22
RNF43-205ENST00000581868 F13A1P00488 732 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms