RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
CDK5RAP3-222ENST00000581708 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
CDK5RAP3-222ENST00000581708 KIF13BQ9NQT8 1826 aa16.67■□□□□ 0.26
CDK5RAP3-222ENST00000581708 MAPK8IP3Q9UPT6 1336 aa16.67■□□□□ 0.26
CDK5RAP3-222ENST00000581708 COL15A1P39059 1388 aa16.66■□□□□ 0.26
CDK5RAP3-222ENST00000581708 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-222ENST00000581708 C10orf71Q711Q0 1435 aa16.66■□□□□ 0.26
CDK5RAP3-222ENST00000581708 MCM10Q7L590 875 aa16.66■□□□□ 0.26
CDK5RAP3-222ENST00000581708 ZBTB1Q9Y2K1 713 aa16.66■□□□□ 0.26
CDK5RAP3-222ENST00000581708 EIF5P55010 431 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-222ENST00000581708 IL6STP40189 918 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-222ENST00000581708 SRP68Q9UHB9 627 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-222ENST00000581708 GOLGB1Q14789 3259 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-222ENST00000581708 SNRPA1P09661 255 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-222ENST00000581708 TM4SF1P30408 202 aa16.63■□□□□ 0.25
CDK5RAP3-222ENST00000581708 FKBP8Q14318 412 aa16.63■□□□□ 0.25
CDK5RAP3-222ENST00000581708 USPL1Q5W0Q7 1092 aa16.63■□□□□ 0.25
CDK5RAP3-222ENST00000581708 NPM2Q86SE8 214 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-222ENST00000581708 PELP1Q8IZL8 1130 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-222ENST00000581708 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-222ENST00000581708 DLG5Q8TDM6 1919 aa16.62■□□□□ 0.25
CDK5RAP3-222ENST00000581708 UTRNP46939 3433 aa16.62■□□□□ 0.25
CDK5RAP3-222ENST00000581708 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
CDK5RAP3-222ENST00000581708 CANXP27824 592 aaKnown RBP16.62■□□□□ 0.25
CDK5RAP3-222ENST00000581708 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
CDK5RAP3-222ENST00000581708 RGL2O15211 777 aa16.61■□□□□ 0.25
CDK5RAP3-222ENST00000581708 DCTN1Q14203 1278 aa16.61■□□□□ 0.25
CDK5RAP3-222ENST00000581708 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
CDK5RAP3-222ENST00000581708 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
CDK5RAP3-222ENST00000581708 KCNQ3O43525 872 aa16.6■□□□□ 0.25
CDK5RAP3-222ENST00000581708 BABAM1Q9NWV8 329 aa16.6■□□□□ 0.25
CDK5RAP3-222ENST00000581708 DDR1Q08345 913 aa16.59■□□□□ 0.25
CDK5RAP3-222ENST00000581708 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDK5RAP3-222ENST00000581708 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
CDK5RAP3-222ENST00000581708 NFIXQ14938 502 aa16.58■□□□□ 0.24
CDK5RAP3-222ENST00000581708 USP16Q9Y5T5 823 aa16.58■□□□□ 0.24
CDK5RAP3-222ENST00000581708 KDM3BQ7LBC6 1761 aa16.57■□□□□ 0.24
CDK5RAP3-222ENST00000581708 A1BGP04217 495 aa16.57■□□□□ 0.24
CDK5RAP3-222ENST00000581708 TMPOP42166 694 aaKnown RBP16.57■□□□□ 0.24
CDK5RAP3-222ENST00000581708 RIPK4P57078 832 aa16.57■□□□□ 0.24
CDK5RAP3-222ENST00000581708 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
CDK5RAP3-222ENST00000581708 BCL2L12Q9HB09 334 aa16.57■□□□□ 0.24
CDK5RAP3-222ENST00000581708 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
CDK5RAP3-222ENST00000581708 SCN7AQ01118 1682 aa16.56■□□□□ 0.24
CDK5RAP3-222ENST00000581708 CLEC4GQ6UXB4 293 aa16.56■□□□□ 0.24
CDK5RAP3-222ENST00000581708 ZNF784Q8NCA9 323 aaPredicted RBP16.56■□□□□ 0.24
CDK5RAP3-222ENST00000581708 A0A0G2JLW4 131 aa16.55■□□□□ 0.24
CDK5RAP3-222ENST00000581708 PDZRN3Q9UPQ7 1066 aa16.55■□□□□ 0.24
CDK5RAP3-222ENST00000581708 LAMB4A4D0S4 1761 aa16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 GIGYF1O75420 1035 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 SERPINB2P05120 415 aa16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 DPEP1P16444 411 aa16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 KCNA3P22001 575 aa16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 DZIP3Q86Y13 1208 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 PIM2Q9P1W9 311 aa16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 TBC1D2BQ9UPU7 963 aa16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 BRCA1P38398 1863 aaKnown RBP16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
CDK5RAP3-222ENST00000581708 CARMIL3Q8ND23 1372 aa16.53■□□□□ 0.24
CDK5RAP3-222ENST00000581708 ERBB4Q15303 1308 aa16.53■□□□□ 0.24
CDK5RAP3-222ENST00000581708 CAMTA2O94983 1202 aa16.53■□□□□ 0.24
CDK5RAP3-222ENST00000581708 ADAMTS8Q9UP79 889 aa16.53■□□□□ 0.24
CDK5RAP3-222ENST00000581708 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
CDK5RAP3-222ENST00000581708 AFDNP55196 1824 aaKnown RBP16.53■□□□□ 0.24
CDK5RAP3-222ENST00000581708 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
CDK5RAP3-222ENST00000581708 SETDB2Q96T68 719 aa16.52■□□□□ 0.24
CDK5RAP3-222ENST00000581708 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
CDK5RAP3-222ENST00000581708 MIS18AQ9NYP9 233 aa16.52■□□□□ 0.24
CDK5RAP3-222ENST00000581708 BCS1LQ9Y276 419 aa16.52■□□□□ 0.24
CDK5RAP3-222ENST00000581708 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
CDK5RAP3-222ENST00000581708 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
CDK5RAP3-222ENST00000581708 DALRD3Q5D0E6 543 aaKnown RBP16.51■□□□□ 0.23
CDK5RAP3-222ENST00000581708 TBC1D9BQ66K14 1250 aa16.51■□□□□ 0.23
CDK5RAP3-222ENST00000581708 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
CDK5RAP3-222ENST00000581708 ARFGEF1Q9Y6D6 1849 aa16.51■□□□□ 0.23
CDK5RAP3-222ENST00000581708 NBPF26B4DH59 902 aa16.5■□□□□ 0.23
CDK5RAP3-222ENST00000581708 NBPF10Q6P3W6 841 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-222ENST00000581708 NBPF15Q8N660 670 aa16.5■□□□□ 0.23
CDK5RAP3-222ENST00000581708 BRIP1Q9BX63 1249 aa16.5■□□□□ 0.23
CDK5RAP3-222ENST00000581708 PDE6BP35913 854 aa16.49■□□□□ 0.23
CDK5RAP3-222ENST00000581708 ADCY9O60503 1353 aa16.49■□□□□ 0.23
CDK5RAP3-222ENST00000581708 ERVV-1B6SEH8 477 aa16.48■□□□□ 0.23
CDK5RAP3-222ENST00000581708 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
CDK5RAP3-222ENST00000581708 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
CDK5RAP3-222ENST00000581708 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
CDK5RAP3-222ENST00000581708 H0YIN7 160 aa16.47■□□□□ 0.23
CDK5RAP3-222ENST00000581708 CHL1O00533 1208 aa16.47■□□□□ 0.23
CDK5RAP3-222ENST00000581708 CALD1Q05682 793 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-222ENST00000581708 CNBD1Q8NA66 436 aa16.47■□□□□ 0.23
CDK5RAP3-222ENST00000581708 TRIM35Q9UPQ4 493 aa16.47■□□□□ 0.23
CDK5RAP3-222ENST00000581708 CHRNA5P30532 468 aa16.46■□□□□ 0.23
CDK5RAP3-222ENST00000581708 ST5P78524 1137 aa16.46■□□□□ 0.23
CDK5RAP3-222ENST00000581708 PRR5LQ6MZQ0 368 aa16.46■□□□□ 0.23
CDK5RAP3-222ENST00000581708 PIP4K2AP48426 406 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-222ENST00000581708 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
CDK5RAP3-222ENST00000581708 ARHGAP27Q6ZUM4 889 aa16.45■□□□□ 0.22
CDK5RAP3-222ENST00000581708 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
CDK5RAP3-222ENST00000581708 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms