RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-205ENST00000580980 FKBP8Q14318 412 aa16.13■□□□□ 0.17
PSMD3-205ENST00000580980 NFE2L2Q16236 605 aa16.13■□□□□ 0.17
PSMD3-205ENST00000580980 SRP68Q9UHB9 627 aaKnown RBP16.13■□□□□ 0.17
PSMD3-205ENST00000580980 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
PSMD3-205ENST00000580980 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
PSMD3-205ENST00000580980 COL15A1P39059 1388 aa16.13■□□□□ 0.17
PSMD3-205ENST00000580980 A0A087WZG4 1122 aa16.12■□□□□ 0.17
PSMD3-205ENST00000580980 YBX3P16989 372 aaKnown RBP eCLIP16.12■□□□□ 0.176e-8■□□□□ 10.1
PSMD3-205ENST00000580980 EIF5P55010 431 aaKnown RBP16.12■□□□□ 0.17
PSMD3-205ENST00000580980 TGFB2P61812 414 aa16.12■□□□□ 0.17
PSMD3-205ENST00000580980 TAF7Q15545 349 aaPredicted RBP16.12■□□□□ 0.17
PSMD3-205ENST00000580980 KCNQ3O43525 872 aa16.11■□□□□ 0.17
PSMD3-205ENST00000580980 CANXP27824 592 aaKnown RBP16.11■□□□□ 0.17
PSMD3-205ENST00000580980 TM4SF1P30408 202 aa16.11■□□□□ 0.17
PSMD3-205ENST00000580980 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
PSMD3-205ENST00000580980 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
PSMD3-205ENST00000580980 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
PSMD3-205ENST00000580980 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
PSMD3-205ENST00000580980 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
PSMD3-205ENST00000580980 IL6STP40189 918 aaPredicted RBP16.1■□□□□ 0.17
PSMD3-205ENST00000580980 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
PSMD3-205ENST00000580980 POLRMTO00411 1230 aaKnown RBP16.08■□□□□ 0.16
PSMD3-205ENST00000580980 DDR1Q08345 913 aa16.08■□□□□ 0.16
PSMD3-205ENST00000580980 KIF13BQ9NQT8 1826 aa16.08■□□□□ 0.16
PSMD3-205ENST00000580980 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
PSMD3-205ENST00000580980 NPM2Q86SE8 214 aaKnown RBP16.07■□□□□ 0.16
PSMD3-205ENST00000580980 BCL2L12Q9HB09 334 aa16.07■□□□□ 0.16
PSMD3-205ENST00000580980 USP16Q9Y5T5 823 aa16.07■□□□□ 0.16
PSMD3-205ENST00000580980 PXDNLA1KZ92 1463 aa16.07■□□□□ 0.16
PSMD3-205ENST00000580980 CHD4Q14839 1912 aa16.07■□□□□ 0.16
PSMD3-205ENST00000580980 A1BGP04217 495 aa16.06■□□□□ 0.16
PSMD3-205ENST00000580980 NFIXQ14938 502 aa16.06■□□□□ 0.16
PSMD3-205ENST00000580980 A0A0G2JLW4 131 aa16.05■□□□□ 0.16
PSMD3-205ENST00000580980 RIPK4P57078 832 aa16.05■□□□□ 0.16
PSMD3-205ENST00000580980 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
PSMD3-205ENST00000580980 WDR43Q15061 677 aaKnown RBP eCLIP16.05■□□□□ 0.16
PSMD3-205ENST00000580980 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
PSMD3-205ENST00000580980 UTRNP46939 3433 aa16.05■□□□□ 0.16
PSMD3-205ENST00000580980 DPEP1P16444 411 aa16.04■□□□□ 0.16
PSMD3-205ENST00000580980 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
PSMD3-205ENST00000580980 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
PSMD3-205ENST00000580980 SERPINB2P05120 415 aa16.03■□□□□ 0.16
PSMD3-205ENST00000580980 TMPOP42166 694 aaKnown RBP16.03■□□□□ 0.16
PSMD3-205ENST00000580980 RUNDC1Q96C34 613 aa16.03■□□□□ 0.16
PSMD3-205ENST00000580980 BABAM1Q9NWV8 329 aa16.03■□□□□ 0.16
PSMD3-205ENST00000580980 TBC1D2BQ9UPU7 963 aa16.03■□□□□ 0.16
PSMD3-205ENST00000580980 ZNF330Q9Y3S2 320 aaPredicted RBP16.03■□□□□ 0.16
PSMD3-205ENST00000580980 DLG5Q8TDM6 1919 aa16.03■□□□□ 0.16
PSMD3-205ENST00000580980 KIAA1551Q9HCM1 1747 aa16.02■□□□□ 0.16
PSMD3-205ENST00000580980 RGL2O15211 777 aa16.02■□□□□ 0.16
PSMD3-205ENST00000580980 KCNA3P22001 575 aa16.02■□□□□ 0.16
PSMD3-205ENST00000580980 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.16
PSMD3-205ENST00000580980 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
PSMD3-205ENST00000580980 PIM2Q9P1W9 311 aa16.02■□□□□ 0.16
PSMD3-205ENST00000580980 GIGYF1O75420 1035 aaPredicted RBP16.01■□□□□ 0.15
PSMD3-205ENST00000580980 CAMTA2O94983 1202 aa16.01■□□□□ 0.15
PSMD3-205ENST00000580980 DZIP3Q86Y13 1208 aaKnown RBP16.01■□□□□ 0.15
PSMD3-205ENST00000580980 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
PSMD3-205ENST00000580980 BCS1LQ9Y276 419 aa16.01■□□□□ 0.15
PSMD3-205ENST00000580980 ANP32CO43423 234 aa16■□□□□ 0.15
PSMD3-205ENST00000580980 TBC1D9BQ66K14 1250 aa16■□□□□ 0.15
PSMD3-205ENST00000580980 CLEC4GQ6UXB4 293 aa16■□□□□ 0.15
PSMD3-205ENST00000580980 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
PSMD3-205ENST00000580980 GOLGB1Q14789 3259 aaKnown RBP16■□□□□ 0.15
PSMD3-205ENST00000580980 KDM3BQ7LBC6 1761 aa16■□□□□ 0.15
PSMD3-205ENST00000580980 NBPF26B4DH59 902 aa15.99■□□□□ 0.15
PSMD3-205ENST00000580980 NBPF10Q6P3W6 841 aaKnown RBP15.99■□□□□ 0.15
PSMD3-205ENST00000580980 BICDL1Q6ZP65 573 aa15.99■□□□□ 0.15
PSMD3-205ENST00000580980 CCDC146Q8IYE0 955 aa15.99■□□□□ 0.15
PSMD3-205ENST00000580980 NBPF15Q8N660 670 aa15.99■□□□□ 0.15
PSMD3-205ENST00000580980 NRXN2Q9P2S2 1712 aa15.99■□□□□ 0.15
PSMD3-205ENST00000580980 SCN7AQ01118 1682 aa15.99■□□□□ 0.15
PSMD3-205ENST00000580980 N4BP2Q86UW6 1770 aaPredicted RBP15.98■□□□□ 0.15
PSMD3-205ENST00000580980 DALRD3Q5D0E6 543 aaKnown RBP15.98■□□□□ 0.15
PSMD3-205ENST00000580980 SETDB2Q96T68 719 aa15.98■□□□□ 0.15
PSMD3-205ENST00000580980 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
PSMD3-205ENST00000580980 PDZRN3Q9UPQ7 1066 aa15.98■□□□□ 0.15
PSMD3-205ENST00000580980 ZNF652Q9Y2D9 606 aa15.98■□□□□ 0.15
PSMD3-205ENST00000580980 CARMIL3Q8ND23 1372 aa15.98■□□□□ 0.15
PSMD3-205ENST00000580980 PIP4K2AP48426 406 aaPredicted RBP15.97■□□□□ 0.15
PSMD3-205ENST00000580980 CHRNA5P30532 468 aa15.96■□□□□ 0.15
PSMD3-205ENST00000580980 NEUROD2Q15784 382 aa15.96■□□□□ 0.15
PSMD3-205ENST00000580980 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.15
PSMD3-205ENST00000580980 RRP7AQ9Y3A4 280 aaKnown RBP15.96■□□□□ 0.15
PSMD3-205ENST00000580980 ERBB4Q15303 1308 aa15.95■□□□□ 0.14
PSMD3-205ENST00000580980 H0YIN7 160 aa15.95■□□□□ 0.14
PSMD3-205ENST00000580980 ARHGAP27Q6ZUM4 889 aa15.95■□□□□ 0.14
PSMD3-205ENST00000580980 TRIM35Q9UPQ4 493 aa15.95■□□□□ 0.14
PSMD3-205ENST00000580980 AFDNP55196 1824 aaKnown RBP15.95■□□□□ 0.14
PSMD3-205ENST00000580980 ADCY9O60503 1353 aa15.95■□□□□ 0.14
PSMD3-205ENST00000580980 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
PSMD3-205ENST00000580980 BRCA1P38398 1863 aaKnown RBP15.95■□□□□ 0.14
PSMD3-205ENST00000580980 CHL1O00533 1208 aa15.94■□□□□ 0.14
PSMD3-205ENST00000580980 PDE6BP35913 854 aa15.94■□□□□ 0.14
PSMD3-205ENST00000580980 PRR5LQ6MZQ0 368 aa15.94■□□□□ 0.14
PSMD3-205ENST00000580980 BCORQ6W2J9 1755 aa15.93■□□□□ 0.14
PSMD3-205ENST00000580980 ERVV-1B6SEH8 477 aa15.93■□□□□ 0.14
PSMD3-205ENST00000580980 ST5P78524 1137 aa15.93■□□□□ 0.14
PSMD3-205ENST00000580980 C2CD5Q86YS7 1000 aa15.93■□□□□ 0.14
PSMD3-205ENST00000580980 CNBD1Q8NA66 436 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms