RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 EN1Q05925 392 aaPredicted RBP15.05■□□□□ -0
SNORD3C-201ENST00000580533 NBPF14Q5TI25 921 aa15.05■□□□□ -0
SNORD3C-201ENST00000580533 CCDC87Q9NVE4 849 aa15.05■□□□□ -0
SNORD3C-201ENST00000580533 HYPKQ9NX55 129 aa15.05■□□□□ -0
SNORD3C-201ENST00000580533 EP400Q96L91 3159 aa15.04■□□□□ -0
SNORD3C-201ENST00000580533 TJP1Q07157 1748 aa15.04■□□□□ -0
SNORD3C-201ENST00000580533 A0A087WZG4 1122 aa15.04■□□□□ -0
SNORD3C-201ENST00000580533 CRKLP46109 303 aaKnown RBP15.04■□□□□ -0
SNORD3C-201ENST00000580533 KRT24Q2M2I5 525 aa15.04■□□□□ -0
SNORD3C-201ENST00000580533 TSPYL6Q8N831 410 aa15.04■□□□□ -0
SNORD3C-201ENST00000580533 DDX21Q9NR30 783 aaKnown RBP eCLIP15.04■□□□□ -03e-26■□□□□ 8.4
SNORD3C-201ENST00000580533 USP16Q9Y5T5 823 aa15.04■□□□□ -0
SNORD3C-201ENST00000580533 KIF16BQ96L93 1317 aa15.03■□□□□ -0
SNORD3C-201ENST00000580533 IL6STP40189 918 aaPredicted RBP15.03■□□□□ -0
SNORD3C-201ENST00000580533 ITPK1Q13572 414 aa15.03■□□□□ -0
SNORD3C-201ENST00000580533 EZH2Q15910 746 aaKnown RBP15.03■□□□□ -0
SNORD3C-201ENST00000580533 ILDR2Q71H61 639 aa15.03■□□□□ -0
SNORD3C-201ENST00000580533 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.03■□□□□ -0
SNORD3C-201ENST00000580533 FLAD1Q8NFF5 587 aa15.03■□□□□ -0
SNORD3C-201ENST00000580533 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
SNORD3C-201ENST00000580533 SMC4Q9NTJ3 1288 aa15.03■□□□□ -0
SNORD3C-201ENST00000580533 DDX58O95786 925 aaKnown RBP15.02■□□□□ -0
SNORD3C-201ENST00000580533 ADRA2BP18089 450 aa15.02■□□□□ -0
SNORD3C-201ENST00000580533 LINC00116Q8NCU8 138 aa15.02■□□□□ -0
SNORD3C-201ENST00000580533 STK32BQ9NY57 414 aa15.02■□□□□ -0
SNORD3C-201ENST00000580533 RCAN3Q9UKA8 241 aa15.02■□□□□ -0
SNORD3C-201ENST00000580533 RTCBQ9Y3I0 505 aaKnown RBP15.02■□□□□ -0
SNORD3C-201ENST00000580533 COL5A3P25940 1745 aaPredicted RBP15.02□□□□□ -0.01
SNORD3C-201ENST00000580533 C4BP0C0L5 1744 aa15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 PRAMEF22A3QJZ6 481 aa15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 GNPATO15228 680 aa15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 IPO8O15397 1037 aaKnown RBP15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 SLC4A2P04920 1241 aa15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 RARSP54136 660 aaKnown RBP15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 DEFB132Q7Z7B7 95 aa15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 NECTIN2Q92692 538 aa15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
SNORD3C-201ENST00000580533 RREB1Q92766 1687 aa15□□□□□ -0.01
SNORD3C-201ENST00000580533 RPS6KA4O75676 772 aa15□□□□□ -0.01
SNORD3C-201ENST00000580533 SSFA2P28290 1259 aa15□□□□□ -0.01
SNORD3C-201ENST00000580533 BRPF1P55201 1214 aaPredicted RBP15□□□□□ -0.01
SNORD3C-201ENST00000580533 KIF6Q6ZMV9 814 aa15□□□□□ -0.01
SNORD3C-201ENST00000580533 PROM2Q8N271 834 aa15□□□□□ -0.01
SNORD3C-201ENST00000580533 TAF1LQ8IZX4 1826 aa15□□□□□ -0.01
SNORD3C-201ENST00000580533 PTPRCP08575 1304 aa14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 A1BGP04217 495 aa14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 MS4A1P11836 297 aa14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 MYL6BP14649 208 aa14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 SSH1Q8WYL5 1049 aa14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 TFCP2L1Q9NZI6 479 aa14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 ZBTB1Q9Y2K1 713 aa14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 ZNF330Q9Y3S2 320 aaPredicted RBP14.99□□□□□ -0.01
SNORD3C-201ENST00000580533 CACNA1FO60840 1977 aa14.98□□□□□ -0.01
SNORD3C-201ENST00000580533 TRAPPC3LQ5T215 181 aa14.98□□□□□ -0.01
SNORD3C-201ENST00000580533 INTS5Q6P9B9 1019 aaKnown RBP14.98□□□□□ -0.01
SNORD3C-201ENST00000580533 COL15A1P39059 1388 aa14.98□□□□□ -0.01
SNORD3C-201ENST00000580533 RGL2O15211 777 aa14.97□□□□□ -0.01
SNORD3C-201ENST00000580533 KCNQ4P56696 695 aa14.97□□□□□ -0.01
SNORD3C-201ENST00000580533 ZNF652Q9Y2D9 606 aa14.97□□□□□ -0.01
SNORD3C-201ENST00000580533 ZPR1O75312 459 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 RFC4P35249 363 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 EIF5P55010 431 aaKnown RBP14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 FLIIQ13045 1269 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 PDIA6Q15084 440 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 SLC15A2Q16348 729 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 NUP188Q5SRE5 1749 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 MRPL50Q8N5N7 158 aaKnown RBP14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 ARHGAP45Q92619 1136 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 ARXQ96QS3 562 aa14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 API5Q9BZZ5 524 aaKnown RBP14.96□□□□□ -0.01
SNORD3C-201ENST00000580533 NBPF26B4DH59 902 aa14.95□□□□□ -0.02
SNORD3C-201ENST00000580533 HSP90AB3PQ58FF7 597 aa14.95□□□□□ -0.02
SNORD3C-201ENST00000580533 NBPF10Q6P3W6 841 aaKnown RBP14.95□□□□□ -0.02
SNORD3C-201ENST00000580533 DZIP3Q86Y13 1208 aaKnown RBP14.95□□□□□ -0.02
SNORD3C-201ENST00000580533 NBPF15Q8N660 670 aa14.95□□□□□ -0.02
SNORD3C-201ENST00000580533 BCL2L13Q9BXK5 485 aa14.95□□□□□ -0.02
SNORD3C-201ENST00000580533 ERVV-1B6SEH8 477 aa14.94□□□□□ -0.02
SNORD3C-201ENST00000580533 TCERG1O14776 1098 aaKnown RBP14.94□□□□□ -0.02
SNORD3C-201ENST00000580533 NEXNQ0ZGT2 675 aa14.94□□□□□ -0.02
SNORD3C-201ENST00000580533 AIMP1Q12904 312 aaKnown RBP14.94□□□□□ -0.02
SNORD3C-201ENST00000580533 ZKSCAN2Q63HK3 967 aa14.94□□□□□ -0.02
SNORD3C-201ENST00000580533 COPS6Q7L5N1 327 aa14.94□□□□□ -0.02
SNORD3C-201ENST00000580533 XAGE3Q8WTP9 111 aa14.94□□□□□ -0.02
SNORD3C-201ENST00000580533 FRAT1Q92837 279 aaPredicted RBP14.94□□□□□ -0.02
SNORD3C-201ENST00000580533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.93□□□□□ -0.02
SNORD3C-201ENST00000580533 PHF14O94880 888 aa14.93□□□□□ -0.02
SNORD3C-201ENST00000580533 PROSER3Q2NL68 480 aa14.93□□□□□ -0.02
SNORD3C-201ENST00000580533 ANKRD13DQ6ZTN6 518 aa14.93□□□□□ -0.02
SNORD3C-201ENST00000580533 RIC3Q7Z5B4 369 aa14.93□□□□□ -0.02
SNORD3C-201ENST00000580533 PLBD2Q8NHP8 589 aa14.93□□□□□ -0.02
SNORD3C-201ENST00000580533 MAP3K15Q6ZN16 1313 aa14.92□□□□□ -0.02
SNORD3C-201ENST00000580533 SOCS7O14512 581 aa14.92□□□□□ -0.02
SNORD3C-201ENST00000580533 MSH5O43196 834 aa14.92□□□□□ -0.02
SNORD3C-201ENST00000580533 BCAR3O75815 825 aa14.92□□□□□ -0.02
SNORD3C-201ENST00000580533 ANXA1P04083 346 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms