RNA–Protein interactions for RNA: ENST00000579611.1

CDC42EP4-204, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-204ENST00000579611 VIRMAQ69YN4 1812 aaKnown RBP22.52■■□□□ 1.2
CDC42EP4-204ENST00000579611 SIPA1L3O60292 1781 aaPredicted RBP22.51■■□□□ 1.19
CDC42EP4-204ENST00000579611 ZPR1O75312 459 aa22.51■■□□□ 1.19
CDC42EP4-204ENST00000579611 EIF5P55010 431 aaKnown RBP22.51■■□□□ 1.19
CDC42EP4-204ENST00000579611 PELP1Q8IZL8 1130 aaKnown RBP22.51■■□□□ 1.19
CDC42EP4-204ENST00000579611 MYBBP1AQ9BQG0 1328 aaKnown RBP22.51■■□□□ 1.19
CDC42EP4-204ENST00000579611 C10orf71Q711Q0 1435 aa22.5■■□□□ 1.19
CDC42EP4-204ENST00000579611 KCNQ3O43525 872 aa22.5■■□□□ 1.19
CDC42EP4-204ENST00000579611 TM4SF1P30408 202 aa22.5■■□□□ 1.19
CDC42EP4-204ENST00000579611 COL15A1P39059 1388 aa22.5■■□□□ 1.19
CDC42EP4-204ENST00000579611 C4AP0C0L4 1744 aa22.49■■□□□ 1.19
CDC42EP4-204ENST00000579611 TAF7Q15545 349 aaPredicted RBP22.49■■□□□ 1.19
CDC42EP4-204ENST00000579611 NFE2L2Q16236 605 aa22.49■■□□□ 1.19
CDC42EP4-204ENST00000579611 A0A087WZG4 1122 aa22.48■■□□□ 1.19
CDC42EP4-204ENST00000579611 DDR1Q08345 913 aa22.48■■□□□ 1.19
CDC42EP4-204ENST00000579611 DCTN1Q14203 1278 aa22.48■■□□□ 1.19
CDC42EP4-204ENST00000579611 USPL1Q5W0Q7 1092 aa22.48■■□□□ 1.19
CDC42EP4-204ENST00000579611 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
CDC42EP4-204ENST00000579611 IL6STP40189 918 aaPredicted RBP22.47■■□□□ 1.19
CDC42EP4-204ENST00000579611 POLRMTO00411 1230 aaKnown RBP22.46■■□□□ 1.19
CDC42EP4-204ENST00000579611 BCL2L12Q9HB09 334 aa22.46■■□□□ 1.19
CDC42EP4-204ENST00000579611 PXDNLA1KZ92 1463 aa22.46■■□□□ 1.19
CDC42EP4-204ENST00000579611 SNRPA1P09661 255 aaKnown RBP22.45■■□□□ 1.18
CDC42EP4-204ENST00000579611 ZNF784Q8NCA9 323 aaPredicted RBP22.45■■□□□ 1.18
CDC42EP4-204ENST00000579611 PNISRQ8TF01 805 aaKnown RBP22.44■■□□□ 1.18
CDC42EP4-204ENST00000579611 MAPK8IP3Q9UPT6 1336 aa22.44■■□□□ 1.18
CDC42EP4-204ENST00000579611 KIF13BQ9NQT8 1826 aa22.43■■□□□ 1.18
CDC42EP4-204ENST00000579611 NFIXQ14938 502 aa22.43■■□□□ 1.18
CDC42EP4-204ENST00000579611 PRKRIP1Q9H875 184 aaPredicted RBP22.43■■□□□ 1.18
CDC42EP4-204ENST00000579611 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
CDC42EP4-204ENST00000579611 CHD4Q14839 1912 aa22.43■■□□□ 1.18
CDC42EP4-204ENST00000579611 A1BGP04217 495 aa22.42■■□□□ 1.18
CDC42EP4-204ENST00000579611 A0A0G2JLW4 131 aa22.41■■□□□ 1.18
CDC42EP4-204ENST00000579611 DPEP1P16444 411 aa22.4■■□□□ 1.18
CDC42EP4-204ENST00000579611 KCNA3P22001 575 aa22.4■■□□□ 1.18
CDC42EP4-204ENST00000579611 PRAMEF22A3QJZ6 481 aa22.38■■□□□ 1.17
CDC42EP4-204ENST00000579611 KIAA1551Q9HCM1 1747 aa22.37■■□□□ 1.17
CDC42EP4-204ENST00000579611 RGL2O15211 777 aa22.37■■□□□ 1.17
CDC42EP4-204ENST00000579611 TMPOP42166 694 aaKnown RBP22.37■■□□□ 1.17
CDC42EP4-204ENST00000579611 RIPK4P57078 832 aa22.37■■□□□ 1.17
CDC42EP4-204ENST00000579611 NPM2Q86SE8 214 aaKnown RBP22.37■■□□□ 1.17
CDC42EP4-204ENST00000579611 MIS18AQ9NYP9 233 aa22.37■■□□□ 1.17
CDC42EP4-204ENST00000579611 CAMTA2O94983 1202 aa22.36■■□□□ 1.17
CDC42EP4-204ENST00000579611 SERPINB2P05120 415 aa22.36■■□□□ 1.17
CDC42EP4-204ENST00000579611 EIF4A1P60842 406 aaKnown RBP22.36■■□□□ 1.17
CDC42EP4-204ENST00000579611 THUMPD2Q9BTF0 503 aaKnown RBP22.36■■□□□ 1.17
CDC42EP4-204ENST00000579611 BABAM1Q9NWV8 329 aa22.36■■□□□ 1.17
CDC42EP4-204ENST00000579611 TBC1D2BQ9UPU7 963 aa22.36■■□□□ 1.17
CDC42EP4-204ENST00000579611 GIGYF1O75420 1035 aaPredicted RBP22.35■■□□□ 1.17
CDC42EP4-204ENST00000579611 LMOD3Q0VAK6 560 aa22.35■■□□□ 1.17
CDC42EP4-204ENST00000579611 PIM2Q9P1W9 311 aa22.35■■□□□ 1.17
CDC42EP4-204ENST00000579611 NBPF26B4DH59 902 aa22.34■■□□□ 1.17
CDC42EP4-204ENST00000579611 WDR43Q15061 677 aaKnown RBP eCLIP22.34■■□□□ 1.17
CDC42EP4-204ENST00000579611 NBPF10Q6P3W6 841 aaKnown RBP22.34■■□□□ 1.17
CDC42EP4-204ENST00000579611 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
CDC42EP4-204ENST00000579611 NBPF15Q8N660 670 aa22.34■■□□□ 1.17
CDC42EP4-204ENST00000579611 WWC3Q9ULE0 1092 aa22.34■■□□□ 1.17
CDC42EP4-204ENST00000579611 TBC1D9BQ66K14 1250 aa22.33■■□□□ 1.17
CDC42EP4-204ENST00000579611 DZIP3Q86Y13 1208 aaKnown RBP22.33■■□□□ 1.17
CDC42EP4-204ENST00000579611 RUNDC1Q96C34 613 aa22.33■■□□□ 1.17
CDC42EP4-204ENST00000579611 ADAMTS8Q9UP79 889 aa22.33■■□□□ 1.17
CDC42EP4-204ENST00000579611 BCS1LQ9Y276 419 aa22.33■■□□□ 1.17
CDC42EP4-204ENST00000579611 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.17
CDC42EP4-204ENST00000579611 NRXN2Q9P2S2 1712 aa22.31■■□□□ 1.16
CDC42EP4-204ENST00000579611 ADCY9O60503 1353 aa22.31■■□□□ 1.16
CDC42EP4-204ENST00000579611 DALRD3Q5D0E6 543 aaKnown RBP22.31■■□□□ 1.16
CDC42EP4-204ENST00000579611 CARMIL3Q8ND23 1372 aa22.3■■□□□ 1.16
CDC42EP4-204ENST00000579611 DLG5Q8TDM6 1919 aa22.3■■□□□ 1.16
CDC42EP4-204ENST00000579611 CHRNA5P30532 468 aa22.3■■□□□ 1.16
CDC42EP4-204ENST00000579611 PIP4K2AP48426 406 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP4-204ENST00000579611 BICDL1Q6ZP65 573 aa22.29■■□□□ 1.16
CDC42EP4-204ENST00000579611 SETDB2Q96T68 719 aa22.29■■□□□ 1.16
CDC42EP4-204ENST00000579611 PDZRN3Q9UPQ7 1066 aa22.29■■□□□ 1.16
CDC42EP4-204ENST00000579611 SCN7AQ01118 1682 aa22.28■■□□□ 1.16
CDC42EP4-204ENST00000579611 CCDC146Q8IYE0 955 aa22.28■■□□□ 1.16
CDC42EP4-204ENST00000579611 BRIP1Q9BX63 1249 aa22.28■■□□□ 1.16
CDC42EP4-204ENST00000579611 TSPYL4Q9UJ04 414 aa22.28■■□□□ 1.16
CDC42EP4-204ENST00000579611 ZNF652Q9Y2D9 606 aa22.28■■□□□ 1.16
CDC42EP4-204ENST00000579611 KDM3BQ7LBC6 1761 aa22.27■■□□□ 1.16
CDC42EP4-204ENST00000579611 N4BP2Q86UW6 1770 aaPredicted RBP22.27■■□□□ 1.16
CDC42EP4-204ENST00000579611 PRR5LQ6MZQ0 368 aa22.27■■□□□ 1.16
CDC42EP4-204ENST00000579611 TRIM35Q9UPQ4 493 aa22.27■■□□□ 1.16
CDC42EP4-204ENST00000579611 ERBB4Q15303 1308 aa22.27■■□□□ 1.16
CDC42EP4-204ENST00000579611 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
CDC42EP4-204ENST00000579611 ATP10DQ9P241 1426 aa22.25■■□□□ 1.15
CDC42EP4-204ENST00000579611 CHL1O00533 1208 aa22.25■■□□□ 1.15
CDC42EP4-204ENST00000579611 ARHGAP27Q6ZUM4 889 aa22.25■■□□□ 1.15
CDC42EP4-204ENST00000579611 BRCA1P38398 1863 aaKnown RBP22.25■■□□□ 1.15
CDC42EP4-204ENST00000579611 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
CDC42EP4-204ENST00000579611 H0YIN7 160 aa22.24■■□□□ 1.15
CDC42EP4-204ENST00000579611 PDE6BP35913 854 aa22.24■■□□□ 1.15
CDC42EP4-204ENST00000579611 AFDNP55196 1824 aaKnown RBP22.24■■□□□ 1.15
CDC42EP4-204ENST00000579611 ERVV-1B6SEH8 477 aa22.23■■□□□ 1.15
CDC42EP4-204ENST00000579611 C2CD5Q86YS7 1000 aa22.23■■□□□ 1.15
CDC42EP4-204ENST00000579611 CNBD1Q8NA66 436 aa22.23■■□□□ 1.15
CDC42EP4-204ENST00000579611 NEUROD2Q15784 382 aa22.22■■□□□ 1.15
CDC42EP4-204ENST00000579611 TTLL6Q8N841 843 aa22.22■■□□□ 1.15
CDC42EP4-204ENST00000579611 LAMB4A4D0S4 1761 aa22.2■■□□□ 1.14
CDC42EP4-204ENST00000579611 BCORQ6W2J9 1755 aa22.2■■□□□ 1.14
CDC42EP4-204ENST00000579611 ST5P78524 1137 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms