RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 IL17REQ8NFR9 667 aa12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP3-211ENST00000578996 KIF13BQ9NQT8 1826 aa12.32□□□□□ -0.44
CDK5RAP3-211ENST00000578996 KIAA1551Q9HCM1 1747 aa12.32□□□□□ -0.44
CDK5RAP3-211ENST00000578996 STARD3NLO95772 234 aa12.32□□□□□ -0.44
CDK5RAP3-211ENST00000578996 ZNF790Q6PG37 636 aa12.32□□□□□ -0.44
CDK5RAP3-211ENST00000578996 ARHGAP27Q6ZUM4 889 aa12.32□□□□□ -0.44
CDK5RAP3-211ENST00000578996 VSIG10Q8N0Z9 540 aa12.32□□□□□ -0.44
CDK5RAP3-211ENST00000578996 PHACTR3Q96KR7 559 aa12.32□□□□□ -0.44
CDK5RAP3-211ENST00000578996 RSPH6AQ9H0K4 717 aa12.32□□□□□ -0.44
CDK5RAP3-211ENST00000578996 ADCY9O60503 1353 aa12.31□□□□□ -0.44
CDK5RAP3-211ENST00000578996 POLRMTO00411 1230 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP3-211ENST00000578996 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP3-211ENST00000578996 BTBD11A6QL63 1104 aa12.3□□□□□ -0.44
CDK5RAP3-211ENST00000578996 CHRNA5P30532 468 aa12.3□□□□□ -0.44
CDK5RAP3-211ENST00000578996 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
CDK5RAP3-211ENST00000578996 RTF1Q92541 710 aaKnown RBP12.3□□□□□ -0.44
CDK5RAP3-211ENST00000578996 PIM2Q9P1W9 311 aa12.3□□□□□ -0.44
CDK5RAP3-211ENST00000578996 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
CDK5RAP3-211ENST00000578996 UBR2Q8IWV8 1755 aa12.3□□□□□ -0.44
CDK5RAP3-211ENST00000578996 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
CDK5RAP3-211ENST00000578996 KCNA3P22001 575 aa12.29□□□□□ -0.44
CDK5RAP3-211ENST00000578996 TM4SF1P30408 202 aa12.29□□□□□ -0.44
CDK5RAP3-211ENST00000578996 NFIXQ14938 502 aa12.29□□□□□ -0.44
CDK5RAP3-211ENST00000578996 NPM2Q86SE8 214 aaKnown RBP12.29□□□□□ -0.44
CDK5RAP3-211ENST00000578996 FMNL2Q96PY5 1086 aa12.29□□□□□ -0.44
CDK5RAP3-211ENST00000578996 DALRD3Q5D0E6 543 aaKnown RBP12.28□□□□□ -0.44
CDK5RAP3-211ENST00000578996 MCM10Q7L590 875 aa12.28□□□□□ -0.44
CDK5RAP3-211ENST00000578996 TEX13AQ9BXU3 409 aaPredicted RBP12.28□□□□□ -0.44
CDK5RAP3-211ENST00000578996 A0A087WZG4 1122 aa12.27□□□□□ -0.45
CDK5RAP3-211ENST00000578996 KCNQ3O43525 872 aa12.27□□□□□ -0.45
CDK5RAP3-211ENST00000578996 SERPINB2P05120 415 aa12.27□□□□□ -0.45
CDK5RAP3-211ENST00000578996 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
CDK5RAP3-211ENST00000578996 BCL2L12Q9HB09 334 aa12.27□□□□□ -0.45
CDK5RAP3-211ENST00000578996 TBC1D2BQ9UPU7 963 aa12.27□□□□□ -0.45
CDK5RAP3-211ENST00000578996 CEMIPQ8WUJ3 1361 aa12.27□□□□□ -0.45
CDK5RAP3-211ENST00000578996 SIPA1L3O60292 1781 aaPredicted RBP12.26□□□□□ -0.45
CDK5RAP3-211ENST00000578996 A1BGP04217 495 aa12.26□□□□□ -0.45
CDK5RAP3-211ENST00000578996 NEFMP07197 916 aa12.26□□□□□ -0.45
CDK5RAP3-211ENST00000578996 EIF5P55010 431 aaKnown RBP12.26□□□□□ -0.45
CDK5RAP3-211ENST00000578996 NPHP1O15259 732 aa12.25□□□□□ -0.45
CDK5RAP3-211ENST00000578996 PIP4K2AP48426 406 aaPredicted RBP12.25□□□□□ -0.45
CDK5RAP3-211ENST00000578996 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
CDK5RAP3-211ENST00000578996 TBC1D9BQ66K14 1250 aa12.25□□□□□ -0.45
CDK5RAP3-211ENST00000578996 BRCA1P38398 1863 aaKnown RBP12.25□□□□□ -0.45
CDK5RAP3-211ENST00000578996 PRAMEF22A3QJZ6 481 aa12.24□□□□□ -0.45
CDK5RAP3-211ENST00000578996 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
CDK5RAP3-211ENST00000578996 C2CD5Q86YS7 1000 aa12.24□□□□□ -0.45
CDK5RAP3-211ENST00000578996 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
CDK5RAP3-211ENST00000578996 RNF181Q9P0P0 153 aa12.24□□□□□ -0.45
CDK5RAP3-211ENST00000578996 AFDNP55196 1824 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-211ENST00000578996 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-211ENST00000578996 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
CDK5RAP3-211ENST00000578996 USP16Q9Y5T5 823 aa12.23□□□□□ -0.45
CDK5RAP3-211ENST00000578996 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
CDK5RAP3-211ENST00000578996 H0YIN7 160 aa12.22□□□□□ -0.45
CDK5RAP3-211ENST00000578996 KIF3CO14782 793 aa12.22□□□□□ -0.45
CDK5RAP3-211ENST00000578996 SNRPA1P09661 255 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-211ENST00000578996 RASSF7Q02833 373 aa12.22□□□□□ -0.45
CDK5RAP3-211ENST00000578996 ARFGEF1Q9Y6D6 1849 aa12.22□□□□□ -0.45
CDK5RAP3-211ENST00000578996 MAPK8IP3Q9UPT6 1336 aa12.21□□□□□ -0.45
CDK5RAP3-211ENST00000578996 NRXN2Q9P2S2 1712 aa12.21□□□□□ -0.45
CDK5RAP3-211ENST00000578996 HTATSF1O43719 755 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-211ENST00000578996 TTLL6Q8N841 843 aa12.21□□□□□ -0.45
CDK5RAP3-211ENST00000578996 ZNF622Q969S3 477 aaKnown RBP eCLIP12.21□□□□□ -0.451e-9■□□□□ 8.9
CDK5RAP3-211ENST00000578996 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
CDK5RAP3-211ENST00000578996 NMRK2Q9NPI5 230 aa12.21□□□□□ -0.45
CDK5RAP3-211ENST00000578996 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
CDK5RAP3-211ENST00000578996 ZNF219Q9P2Y4 722 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-211ENST00000578996 CAMTA2O94983 1202 aa12.2□□□□□ -0.46
CDK5RAP3-211ENST00000578996 HSPA6P17066 643 aa12.2□□□□□ -0.46
CDK5RAP3-211ENST00000578996 TAF7Q15545 349 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-211ENST00000578996 PRR5LQ6MZQ0 368 aa12.2□□□□□ -0.46
CDK5RAP3-211ENST00000578996 C16orf71Q8IYS4 520 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-211ENST00000578996 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
CDK5RAP3-211ENST00000578996 PDE6BP35913 854 aa12.19□□□□□ -0.46
CDK5RAP3-211ENST00000578996 ST5P78524 1137 aa12.19□□□□□ -0.46
CDK5RAP3-211ENST00000578996 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
CDK5RAP3-211ENST00000578996 TOMM70O94826 608 aa12.18□□□□□ -0.46
CDK5RAP3-211ENST00000578996 NGEFQ8N5V2 710 aa12.18□□□□□ -0.46
CDK5RAP3-211ENST00000578996 THUMPD2Q9BTF0 503 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-211ENST00000578996 BRIP1Q9BX63 1249 aa12.18□□□□□ -0.46
CDK5RAP3-211ENST00000578996 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-211ENST00000578996 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
CDK5RAP3-211ENST00000578996 FAM177BA6PVY3 158 aa12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 C21orf2O43822 256 aa12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 DDX10Q13206 875 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 NFE2L2Q16236 605 aa12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 NBPF5PQ86XG9 351 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 PNISRQ8TF01 805 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 BCORQ6W2J9 1755 aa12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 DLEC1Q9Y238 1755 aa12.17□□□□□ -0.46
CDK5RAP3-211ENST00000578996 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
CDK5RAP3-211ENST00000578996 LMNB1P20700 586 aa12.16□□□□□ -0.46
CDK5RAP3-211ENST00000578996 NBPF10Q6P3W6 841 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-211ENST00000578996 NBPF15Q8N660 670 aa12.16□□□□□ -0.46
CDK5RAP3-211ENST00000578996 RRAGCQ9HB90 399 aa12.16□□□□□ -0.46
CDK5RAP3-211ENST00000578996 PDZRN3Q9UPQ7 1066 aa12.16□□□□□ -0.46
CDK5RAP3-211ENST00000578996 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms