RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-210ENST00000578733 MYH14Q7Z406 1995 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-210ENST00000578733 QSER1Q2KHR3 1735 aa14.52□□□□□ -0.08
CDK5RAP3-210ENST00000578733 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-210ENST00000578733 DUSP27Q5VZP5 1158 aa14.52□□□□□ -0.09
CDK5RAP3-210ENST00000578733 UBR3Q6ZT12 1888 aa14.52□□□□□ -0.09
CDK5RAP3-210ENST00000578733 NPM2Q86SE8 214 aaKnown RBP14.51□□□□□ -0.09
CDK5RAP3-210ENST00000578733 ZNF428Q96B54 188 aa14.51□□□□□ -0.09
CDK5RAP3-210ENST00000578733 CASZ1Q86V15 1759 aa14.51□□□□□ -0.09
CDK5RAP3-210ENST00000578733 ERBB4Q15303 1308 aa14.5□□□□□ -0.09
CDK5RAP3-210ENST00000578733 ELL2O00472 640 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-210ENST00000578733 HDGFL1Q5TGJ6 251 aa14.5□□□□□ -0.09
CDK5RAP3-210ENST00000578733 CCDC30Q5VVM6 783 aa14.5□□□□□ -0.09
CDK5RAP3-210ENST00000578733 DNAJC10Q8IXB1 793 aa14.5□□□□□ -0.09
CDK5RAP3-210ENST00000578733 TUBGCP6Q96RT7 1819 aa14.5□□□□□ -0.09
CDK5RAP3-210ENST00000578733 EIF2S2P20042 333 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-210ENST00000578733 C8orf58Q8NAV2 365 aa14.49□□□□□ -0.09
CDK5RAP3-210ENST00000578733 ZNF784Q8NCA9 323 aaPredicted RBP14.49□□□□□ -0.09
CDK5RAP3-210ENST00000578733 AK7Q96M32 723 aa14.49□□□□□ -0.09
CDK5RAP3-210ENST00000578733 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
CDK5RAP3-210ENST00000578733 CNTNAP4Q9C0A0 1308 aa14.48□□□□□ -0.09
CDK5RAP3-210ENST00000578733 CYP19A1P11511 503 aaPredicted RBP14.48□□□□□ -0.09
CDK5RAP3-210ENST00000578733 ITPK1Q13572 414 aa14.47□□□□□ -0.09
CDK5RAP3-210ENST00000578733 KRT24Q2M2I5 525 aa14.47□□□□□ -0.09
CDK5RAP3-210ENST00000578733 RC3H1Q5TC82 1133 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-210ENST00000578733 SLC4A9Q96Q91 983 aa14.47□□□□□ -0.09
CDK5RAP3-210ENST00000578733 CCDC87Q9NVE4 849 aa14.47□□□□□ -0.09
CDK5RAP3-210ENST00000578733 DBF4Q9UBU7 674 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-210ENST00000578733 USP16Q9Y5T5 823 aa14.47□□□□□ -0.09
CDK5RAP3-210ENST00000578733 VAMP4O75379 141 aa14.46□□□□□ -0.09
CDK5RAP3-210ENST00000578733 CRKLP46109 303 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-210ENST00000578733 LINC00116Q8NCU8 138 aa14.46□□□□□ -0.09
CDK5RAP3-210ENST00000578733 LRRC4BQ9NT99 713 aa14.46□□□□□ -0.09
CDK5RAP3-210ENST00000578733 STK32BQ9NY57 414 aa14.46□□□□□ -0.09
CDK5RAP3-210ENST00000578733 CHD4Q14839 1912 aa14.46□□□□□ -0.09
CDK5RAP3-210ENST00000578733 C4AP0C0L4 1744 aa14.46□□□□□ -0.1
CDK5RAP3-210ENST00000578733 PRAMEF22A3QJZ6 481 aa14.45□□□□□ -0.1
CDK5RAP3-210ENST00000578733 ALDH1L2Q3SY69 923 aa14.45□□□□□ -0.1
CDK5RAP3-210ENST00000578733 PROM2Q8N271 834 aa14.45□□□□□ -0.1
CDK5RAP3-210ENST00000578733 TSPYL6Q8N831 410 aa14.45□□□□□ -0.1
CDK5RAP3-210ENST00000578733 ANO8Q9HCE9 1232 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-210ENST00000578733 NUP98P52948 1817 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 A0A087WZG4 1122 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 GNPATO15228 680 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 IL6STP40189 918 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 KCNQ4P56696 695 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 FLAD1Q8NFF5 587 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 DDX21Q9NR30 783 aaKnown RBP eCLIP14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 HYPKQ9NX55 129 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 RTCBQ9Y3I0 505 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 BCORQ6W2J9 1755 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 UTRNP46939 3433 aa14.44□□□□□ -0.1
CDK5RAP3-210ENST00000578733 ANKRD36CQ5JPF3 1778 aa14.43□□□□□ -0.1
CDK5RAP3-210ENST00000578733 A1BGP04217 495 aa14.43□□□□□ -0.1
CDK5RAP3-210ENST00000578733 ADRA2BP18089 450 aa14.43□□□□□ -0.1
CDK5RAP3-210ENST00000578733 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-210ENST00000578733 PTGER2P43116 358 aa14.43□□□□□ -0.1
CDK5RAP3-210ENST00000578733 TFCP2L1Q9NZI6 479 aa14.43□□□□□ -0.1
CDK5RAP3-210ENST00000578733 ARFGEF2Q9Y6D5 1785 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 RPS6KA4O75676 772 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 ZBTB7AO95365 584 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 CENPBP07199 599 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 SSFA2P28290 1259 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 C1QTNF8P60827 252 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 SYT17Q9BSW7 474 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 SMC4Q9NTJ3 1288 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 CHPF2Q9P2E5 772 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 ZBTB1Q9Y2K1 713 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 ZNF330Q9Y3S2 320 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 AFDNP55196 1824 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 SCN7AQ01118 1682 aa14.42□□□□□ -0.1
CDK5RAP3-210ENST00000578733 DDX58O95786 925 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-210ENST00000578733 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
CDK5RAP3-210ENST00000578733 MYL6BP14649 208 aa14.41□□□□□ -0.1
CDK5RAP3-210ENST00000578733 SLC15A2Q16348 729 aa14.41□□□□□ -0.1
CDK5RAP3-210ENST00000578733 INTS5Q6P9B9 1019 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-210ENST00000578733 COL15A1P39059 1388 aa14.41□□□□□ -0.1
CDK5RAP3-210ENST00000578733 KIF16BQ96L93 1317 aa14.41□□□□□ -0.1
CDK5RAP3-210ENST00000578733 TRAPPC3LQ5T215 181 aa14.4□□□□□ -0.1
CDK5RAP3-210ENST00000578733 KIF6Q6ZMV9 814 aa14.4□□□□□ -0.1
CDK5RAP3-210ENST00000578733 AKT1S1Q96B36 256 aa14.4□□□□□ -0.1
CDK5RAP3-210ENST00000578733 FHDC1Q9C0D6 1143 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-210ENST00000578733 MTFR1LQ9H019 292 aa14.4□□□□□ -0.1
CDK5RAP3-210ENST00000578733 RFC4P35249 363 aa14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 RARSP54136 660 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 EIF5P55010 431 aaKnown RBP14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 IFFO2Q5TF58 517 aa14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 SSH1Q8WYL5 1049 aa14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ARXQ96QS3 562 aa14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 RCAN3Q9UKA8 241 aa14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ATF5Q9Y2D1 282 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 N4BP2Q86UW6 1770 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-210ENST00000578733 NBPF26B4DH59 902 aa14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 IPO8O15397 1037 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ZPR1O75312 459 aa14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PHF14O94880 888 aa14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ZNF827Q17R98 1081 aa14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 NBPF10Q6P3W6 841 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 NBPF15Q8N660 670 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms