RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 TFIP11Q9UBB9 837 aaKnown RBP16.45■□□□□ 0.22
NDEL1-204ENST00000578172 PIK3R4Q99570 1358 aa16.45■□□□□ 0.22
NDEL1-204ENST00000578172 SOS1Q07889 1333 aaPredicted RBP16.45■□□□□ 0.22
NDEL1-204ENST00000578172 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
NDEL1-204ENST00000578172 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
NDEL1-204ENST00000578172 MYO3AQ8NEV4 1616 aa16.45■□□□□ 0.22
NDEL1-204ENST00000578172 SIGLEC1Q9BZZ2 1709 aa16.45■□□□□ 0.22
NDEL1-204ENST00000578172 ATP5J2-PTCD1G3V325 749 aa16.45■□□□□ 0.22
NDEL1-204ENST00000578172 PTCD1O75127 700 aaKnown RBP16.45■□□□□ 0.22
NDEL1-204ENST00000578172 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
NDEL1-204ENST00000578172 ZDHHC9Q9Y397 364 aa16.45■□□□□ 0.22
NDEL1-204ENST00000578172 HCLS1P14317 486 aaPredicted RBP16.44■□□□□ 0.22
NDEL1-204ENST00000578172 GIMAP6Q6P9H5 292 aa16.44■□□□□ 0.22
NDEL1-204ENST00000578172 USP48Q86UV5 1035 aa16.44■□□□□ 0.22
NDEL1-204ENST00000578172 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
NDEL1-204ENST00000578172 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
NDEL1-204ENST00000578172 ZSCAN30Q86W11 494 aa16.44■□□□□ 0.22
NDEL1-204ENST00000578172 MYO5BQ9ULV0 1848 aa16.44■□□□□ 0.22
NDEL1-204ENST00000578172 ARHGEF28Q8N1W1 1705 aaKnown RBP16.44■□□□□ 0.22
NDEL1-204ENST00000578172 PHF8Q9UPP1 1060 aa16.44■□□□□ 0.22
NDEL1-204ENST00000578172 A2ML1A8K2U0 1454 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 LMTK2Q8IWU2 1503 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 MAP2P11137 1827 aaKnown RBP16.43■□□□□ 0.22
NDEL1-204ENST00000578172 RASEFQ8IZ41 740 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 TSC1Q92574 1164 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 TSPY26PQ9H489 355 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 DIP2CQ9Y2E4 1556 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 AK2P54819 239 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 ORAI2Q96SN7 254 aa16.43■□□□□ 0.22
NDEL1-204ENST00000578172 CHRNA2Q15822 529 aa16.42■□□□□ 0.22
NDEL1-204ENST00000578172 SYAP1Q96A49 352 aaPredicted RBP16.42■□□□□ 0.22
NDEL1-204ENST00000578172 NEO1Q92859 1461 aa16.42■□□□□ 0.22
NDEL1-204ENST00000578172 FLT4P35916 1363 aa16.42■□□□□ 0.22
NDEL1-204ENST00000578172 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
NDEL1-204ENST00000578172 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
NDEL1-204ENST00000578172 CKAP2LQ8IYA6 745 aa16.41■□□□□ 0.22
NDEL1-204ENST00000578172 ZKSCAN1P17029 563 aaPredicted RBP16.4■□□□□ 0.22
NDEL1-204ENST00000578172 THEMISQ8N1K5 641 aaPredicted RBP16.4■□□□□ 0.22
NDEL1-204ENST00000578172 GPATCH3Q96I76 525 aa16.4■□□□□ 0.22
NDEL1-204ENST00000578172 FAM227BQ96M60 508 aa16.4■□□□□ 0.22
NDEL1-204ENST00000578172 BRPF1P55201 1214 aaPredicted RBP16.4■□□□□ 0.22
NDEL1-204ENST00000578172 PDRG1Q9NUG6 133 aa16.4■□□□□ 0.22
NDEL1-204ENST00000578172 DNM1Q05193 864 aaKnown RBP16.4■□□□□ 0.22
NDEL1-204ENST00000578172 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
NDEL1-204ENST00000578172 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
NDEL1-204ENST00000578172 STK11IPQ8N1F8 1099 aa16.39■□□□□ 0.22
NDEL1-204ENST00000578172 MYD88Q99836 296 aa16.39■□□□□ 0.21
NDEL1-204ENST00000578172 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
NDEL1-204ENST00000578172 GJB2P29033 226 aa16.39■□□□□ 0.21
NDEL1-204ENST00000578172 DDIT3P35638 169 aa16.39■□□□□ 0.21
NDEL1-204ENST00000578172 GUCY1B3Q02153 619 aa16.39■□□□□ 0.21
NDEL1-204ENST00000578172 PTH1RQ03431 593 aa16.39■□□□□ 0.21
NDEL1-204ENST00000578172 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
NDEL1-204ENST00000578172 RAB11FIP3O75154 756 aa16.38■□□□□ 0.21
NDEL1-204ENST00000578172 ADCK5Q3MIX3 580 aa16.38■□□□□ 0.21
NDEL1-204ENST00000578172 KAT6BQ8WYB5 2073 aa16.38■□□□□ 0.21
NDEL1-204ENST00000578172 LARGE1O95461 756 aa16.38■□□□□ 0.21
NDEL1-204ENST00000578172 CHGBP05060 677 aa16.38■□□□□ 0.21
NDEL1-204ENST00000578172 BICD2Q8TD16 824 aa16.38■□□□□ 0.21
NDEL1-204ENST00000578172 PLEKHO1Q53GL0 409 aaPredicted RBP16.38■□□□□ 0.21
NDEL1-204ENST00000578172 LARP1BQ659C4 914 aaKnown RBP16.38■□□□□ 0.21
NDEL1-204ENST00000578172 RAPGEF4Q8WZA2 1011 aa16.37■□□□□ 0.21
NDEL1-204ENST00000578172 WDR33Q9C0J8 1336 aaKnown RBP16.37■□□□□ 0.21
NDEL1-204ENST00000578172 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
NDEL1-204ENST00000578172 UQCRHLA0A096LP55 91 aa16.37■□□□□ 0.21
NDEL1-204ENST00000578172 PLEKHG3A1L390 1219 aa16.37■□□□□ 0.21
NDEL1-204ENST00000578172 MBD3O95983 291 aa16.37■□□□□ 0.21
NDEL1-204ENST00000578172 UQCRHP07919 91 aa16.37■□□□□ 0.21
NDEL1-204ENST00000578172 CYP46A1Q9Y6A2 500 aa16.37■□□□□ 0.21
NDEL1-204ENST00000578172 NEXNQ0ZGT2 675 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 LRSAM1Q6UWE0 723 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 ATP7BP35670 1465 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
NDEL1-204ENST00000578172 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 H3BQV1 296 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 STX6O43752 255 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 IFFO2Q5TF58 517 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 RUFY2Q8WXA3 655 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 PRDM10Q9NQV6 1147 aa16.36■□□□□ 0.21
NDEL1-204ENST00000578172 SYT1P21579 422 aa16.35■□□□□ 0.21
NDEL1-204ENST00000578172 SLFNL1Q499Z3 407 aa16.35■□□□□ 0.21
NDEL1-204ENST00000578172 CPSF1Q10570 1443 aaKnown RBP16.35■□□□□ 0.21
NDEL1-204ENST00000578172 CHST3Q7LGC8 479 aa16.35■□□□□ 0.21
NDEL1-204ENST00000578172 TTC5Q8N0Z6 440 aa16.35■□□□□ 0.21
NDEL1-204ENST00000578172 AATKQ6ZMQ8 1374 aa16.35■□□□□ 0.21
NDEL1-204ENST00000578172 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
NDEL1-204ENST00000578172 MED14O60244 1454 aa16.35■□□□□ 0.21
NDEL1-204ENST00000578172 CDK12Q9NYV4 1490 aaPredicted RBP16.35■□□□□ 0.21
NDEL1-204ENST00000578172 MAP3K5Q99683 1374 aa16.34■□□□□ 0.21
NDEL1-204ENST00000578172 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
NDEL1-204ENST00000578172 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
NDEL1-204ENST00000578172 DDX46Q7L014 1031 aaKnown RBP16.34■□□□□ 0.21
NDEL1-204ENST00000578172 UBE3BQ7Z3V4 1068 aa16.34■□□□□ 0.21
NDEL1-204ENST00000578172 USP6P35125 1406 aa16.34■□□□□ 0.21
NDEL1-204ENST00000578172 ANKRD24Q8TF21 1146 aa16.34■□□□□ 0.21
NDEL1-204ENST00000578172 BICC1Q9H694 974 aaKnown RBP16.34■□□□□ 0.21
NDEL1-204ENST00000578172 MCM2P49736 904 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms