RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 RTF1Q92541 710 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-206ENST00000577578 FMNL2Q96PY5 1086 aa16.56■□□□□ 0.24
CSNK1D-206ENST00000577578 TEX13AQ9BXU3 409 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-206ENST00000577578 BTBD11A6QL63 1104 aa16.55■□□□□ 0.24
CSNK1D-206ENST00000577578 MCM10Q7L590 875 aa16.55■□□□□ 0.24
CSNK1D-206ENST00000577578 NARFQ9UHQ1 456 aa16.55■□□□□ 0.24
CSNK1D-206ENST00000577578 N4BP2Q86UW6 1770 aaPredicted RBP16.55■□□□□ 0.24
CSNK1D-206ENST00000577578 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
CSNK1D-206ENST00000577578 EIF5P55010 431 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-206ENST00000577578 TGFB2P61812 414 aa16.54■□□□□ 0.24
CSNK1D-206ENST00000577578 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
CSNK1D-206ENST00000577578 PARP3Q9Y6F1 533 aa16.54■□□□□ 0.24
CSNK1D-206ENST00000577578 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
CSNK1D-206ENST00000577578 MYBBP1AQ9BQG0 1328 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-206ENST00000577578 KCNQ3O43525 872 aa16.53■□□□□ 0.24
CSNK1D-206ENST00000577578 TM4SF1P30408 202 aa16.53■□□□□ 0.24
CSNK1D-206ENST00000577578 DDR1Q08345 913 aa16.53■□□□□ 0.24
CSNK1D-206ENST00000577578 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-206ENST00000577578 AFDNP55196 1824 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-206ENST00000577578 KDM3BQ7LBC6 1761 aa16.53■□□□□ 0.24
CSNK1D-206ENST00000577578 ZPR1O75312 459 aa16.52■□□□□ 0.24
CSNK1D-206ENST00000577578 NEFMP07197 916 aa16.52■□□□□ 0.24
CSNK1D-206ENST00000577578 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
CSNK1D-206ENST00000577578 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.24
CSNK1D-206ENST00000577578 ZNF784Q8NCA9 323 aaPredicted RBP16.52■□□□□ 0.24
CSNK1D-206ENST00000577578 BCL2L12Q9HB09 334 aa16.52■□□□□ 0.24
CSNK1D-206ENST00000577578 POLRMTO00411 1230 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-206ENST00000577578 CANXP27824 592 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-206ENST00000577578 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
CSNK1D-206ENST00000577578 NFE2L2Q16236 605 aa16.51■□□□□ 0.23
CSNK1D-206ENST00000577578 TAF7Q15545 349 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-206ENST00000577578 LAMB4A4D0S4 1761 aa16.5■□□□□ 0.23
CSNK1D-206ENST00000577578 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
CSNK1D-206ENST00000577578 BCORQ6W2J9 1755 aa16.49■□□□□ 0.23
CSNK1D-206ENST00000577578 A0A087WZG4 1122 aa16.49■□□□□ 0.23
CSNK1D-206ENST00000577578 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-206ENST00000577578 NFIXQ14938 502 aa16.49■□□□□ 0.23
CSNK1D-206ENST00000577578 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
CSNK1D-206ENST00000577578 ZEB1P37275 1124 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-206ENST00000577578 USP16Q9Y5T5 823 aa16.48■□□□□ 0.23
CSNK1D-206ENST00000577578 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
CSNK1D-206ENST00000577578 A1BGP04217 495 aa16.47■□□□□ 0.23
CSNK1D-206ENST00000577578 DPEP1P16444 411 aa16.47■□□□□ 0.23
CSNK1D-206ENST00000577578 KCNA3P22001 575 aa16.47■□□□□ 0.23
CSNK1D-206ENST00000577578 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
CSNK1D-206ENST00000577578 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-206ENST00000577578 DLEC1Q9Y238 1755 aa16.46■□□□□ 0.23
CSNK1D-206ENST00000577578 PRAMEF22A3QJZ6 481 aa16.46■□□□□ 0.23
CSNK1D-206ENST00000577578 ADCY9O60503 1353 aa16.46■□□□□ 0.23
CSNK1D-206ENST00000577578 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-206ENST00000577578 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
CSNK1D-206ENST00000577578 WWC3Q9ULE0 1092 aa16.44■□□□□ 0.22
CSNK1D-206ENST00000577578 RGL2O15211 777 aa16.43■□□□□ 0.22
CSNK1D-206ENST00000577578 CAMTA2O94983 1202 aa16.43■□□□□ 0.22
CSNK1D-206ENST00000577578 SERPINB2P05120 415 aa16.43■□□□□ 0.22
CSNK1D-206ENST00000577578 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
CSNK1D-206ENST00000577578 ANKRD31Q8N7Z5 1873 aa16.43■□□□□ 0.22
CSNK1D-206ENST00000577578 NBPF26B4DH59 902 aa16.42■□□□□ 0.22
CSNK1D-206ENST00000577578 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-206ENST00000577578 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-206ENST00000577578 EIF4A1P60842 406 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-206ENST00000577578 TBC1D9BQ66K14 1250 aa16.42■□□□□ 0.22
CSNK1D-206ENST00000577578 NBPF10Q6P3W6 841 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-206ENST00000577578 NBPF15Q8N660 670 aa16.42■□□□□ 0.22
CSNK1D-206ENST00000577578 PIM2Q9P1W9 311 aa16.42■□□□□ 0.22
CSNK1D-206ENST00000577578 CARMIL3Q8ND23 1372 aa16.41■□□□□ 0.22
CSNK1D-206ENST00000577578 RIPK4P57078 832 aa16.41■□□□□ 0.22
CSNK1D-206ENST00000577578 DZIP3Q86Y13 1208 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-206ENST00000577578 BABAM1Q9NWV8 329 aa16.41■□□□□ 0.22
CSNK1D-206ENST00000577578 BCS1LQ9Y276 419 aa16.41■□□□□ 0.22
CSNK1D-206ENST00000577578 ZNF330Q9Y3S2 320 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-206ENST00000577578 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
CSNK1D-206ENST00000577578 CHRNA5P30532 468 aa16.4■□□□□ 0.22
CSNK1D-206ENST00000577578 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
CSNK1D-206ENST00000577578 CLEC4GQ6UXB4 293 aa16.4■□□□□ 0.22
CSNK1D-206ENST00000577578 NPM2Q86SE8 214 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-206ENST00000577578 PIP4K2AP48426 406 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-206ENST00000577578 DALRD3Q5D0E6 543 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-206ENST00000577578 RUNDC1Q96C34 613 aa16.39■□□□□ 0.21
CSNK1D-206ENST00000577578 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
CSNK1D-206ENST00000577578 WDR43Q15061 677 aaKnown RBP eCLIP16.38■□□□□ 0.21
CSNK1D-206ENST00000577578 BICDL1Q6ZP65 573 aa16.38■□□□□ 0.21
CSNK1D-206ENST00000577578 COL11A2P13942 1736 aaPredicted RBP16.38■□□□□ 0.21
CSNK1D-206ENST00000577578 PRR5LQ6MZQ0 368 aa16.37■□□□□ 0.21
CSNK1D-206ENST00000577578 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
CSNK1D-206ENST00000577578 SETDB2Q96T68 719 aa16.37■□□□□ 0.21
CSNK1D-206ENST00000577578 NUP98P52948 1817 aa16.37■□□□□ 0.21
CSNK1D-206ENST00000577578 SBF1O95248 1867 aa16.37■□□□□ 0.21
CSNK1D-206ENST00000577578 BRIP1Q9BX63 1249 aa16.36■□□□□ 0.21
CSNK1D-206ENST00000577578 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
CSNK1D-206ENST00000577578 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
CSNK1D-206ENST00000577578 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
CSNK1D-206ENST00000577578 ZNF652Q9Y2D9 606 aa16.36■□□□□ 0.21
CSNK1D-206ENST00000577578 ERBB4Q15303 1308 aa16.36■□□□□ 0.21
CSNK1D-206ENST00000577578 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
CSNK1D-206ENST00000577578 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
CSNK1D-206ENST00000577578 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
CSNK1D-206ENST00000577578 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.21
CSNK1D-206ENST00000577578 H0YIN7 160 aa16.33■□□□□ 0.2
CSNK1D-206ENST00000577578 CHL1O00533 1208 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms