RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 DLG5Q8TDM6 1919 aa20.06■□□□□ 0.8
SMG6-220ENST00000576218 KCNQ3O43525 872 aa20.06■□□□□ 0.8
SMG6-220ENST00000576218 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
SMG6-220ENST00000576218 NLGN1Q8N2Q7 840 aa20.06■□□□□ 0.8
SMG6-220ENST00000576218 THUMPD2Q9BTF0 503 aaKnown RBP20.06■□□□□ 0.8
SMG6-220ENST00000576218 ADAMTS8Q9UP79 889 aa20.06■□□□□ 0.8
SMG6-220ENST00000576218 ZBTB1Q9Y2K1 713 aa20.06■□□□□ 0.8
SMG6-220ENST00000576218 RRP7AQ9Y3A4 280 aaKnown RBP20.06■□□□□ 0.8
SMG6-220ENST00000576218 MYH14Q7Z406 1995 aaKnown RBP20.05■□□□□ 0.8
SMG6-220ENST00000576218 MMP10P09238 476 aa20.05■□□□□ 0.8
SMG6-220ENST00000576218 COL15A1P39059 1388 aa20.05■□□□□ 0.8
SMG6-220ENST00000576218 COL24A1Q17RW2 1714 aa20.05■□□□□ 0.8
SMG6-220ENST00000576218 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
SMG6-220ENST00000576218 MIS18AQ9NYP9 233 aa20.04■□□□□ 0.8
SMG6-220ENST00000576218 SOS1Q07889 1333 aaPredicted RBP20.03■□□□□ 0.8
SMG6-220ENST00000576218 SNRPA1P09661 255 aaKnown RBP20.03■□□□□ 0.8
SMG6-220ENST00000576218 SRP68Q9UHB9 627 aaKnown RBP20.03■□□□□ 0.8
SMG6-220ENST00000576218 USP42Q9H9J4 1324 aaKnown RBP20.02■□□□□ 0.8
SMG6-220ENST00000576218 A0A087WZG4 1122 aa20.02■□□□□ 0.8
SMG6-220ENST00000576218 GYS1P13807 737 aa20.02■□□□□ 0.8
SMG6-220ENST00000576218 PARP3Q9Y6F1 533 aa20.02■□□□□ 0.8
SMG6-220ENST00000576218 C4AP0C0L4 1744 aa20.02■□□□□ 0.79
SMG6-220ENST00000576218 GPR162Q16538 588 aa20.01■□□□□ 0.79
SMG6-220ENST00000576218 USPL1Q5W0Q7 1092 aa20.01■□□□□ 0.79
SMG6-220ENST00000576218 MRS2Q9HD23 443 aa20.01■□□□□ 0.79
SMG6-220ENST00000576218 TSPYL4Q9UJ04 414 aa20.01■□□□□ 0.79
SMG6-220ENST00000576218 NLGN2Q8NFZ4 835 aa20■□□□□ 0.79
SMG6-220ENST00000576218 LAS1LQ9Y4W2 734 aaKnown RBP19.99■□□□□ 0.79
SMG6-220ENST00000576218 CD2APQ9Y5K6 639 aa19.99■□□□□ 0.79
SMG6-220ENST00000576218 A1BGP04217 495 aa19.98■□□□□ 0.79
SMG6-220ENST00000576218 NARFQ9UHQ1 456 aa19.98■□□□□ 0.79
SMG6-220ENST00000576218 FKBP8Q14318 412 aa19.97■□□□□ 0.79
SMG6-220ENST00000576218 USP16Q9Y5T5 823 aa19.97■□□□□ 0.79
SMG6-220ENST00000576218 PRAMEF22A3QJZ6 481 aa19.96■□□□□ 0.79
SMG6-220ENST00000576218 IL6STP40189 918 aaPredicted RBP19.96■□□□□ 0.79
SMG6-220ENST00000576218 PIP4K2AP48426 406 aaPredicted RBP19.95■□□□□ 0.78
SMG6-220ENST00000576218 EIF5P55010 431 aaKnown RBP19.95■□□□□ 0.78
SMG6-220ENST00000576218 TBC1D2BQ9UPU7 963 aa19.95■□□□□ 0.78
SMG6-220ENST00000576218 KDM3BQ7LBC6 1761 aa19.94■□□□□ 0.78
SMG6-220ENST00000576218 APAF1O14727 1248 aa19.94■□□□□ 0.78
SMG6-220ENST00000576218 EIF4A1P60842 406 aaKnown RBP19.93■□□□□ 0.78
SMG6-220ENST00000576218 CCDC184Q52MB2 194 aa19.93■□□□□ 0.78
SMG6-220ENST00000576218 BICDL1Q6ZP65 573 aa19.93■□□□□ 0.78
SMG6-220ENST00000576218 NPHP1O15259 732 aa19.92■□□□□ 0.78
SMG6-220ENST00000576218 DZIP3Q86Y13 1208 aaKnown RBP19.92■□□□□ 0.78
SMG6-220ENST00000576218 BABAM1Q9NWV8 329 aa19.92■□□□□ 0.78
SMG6-220ENST00000576218 WWC3Q9ULE0 1092 aa19.92■□□□□ 0.78
SMG6-220ENST00000576218 GIGYF1O75420 1035 aaPredicted RBP19.91■□□□□ 0.78
SMG6-220ENST00000576218 CALD1Q05682 793 aaKnown RBP19.91■□□□□ 0.78
SMG6-220ENST00000576218 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
SMG6-220ENST00000576218 LAMB4A4D0S4 1761 aa19.9■□□□□ 0.78
SMG6-220ENST00000576218 DDR1Q08345 913 aa19.9■□□□□ 0.78
SMG6-220ENST00000576218 NGEFQ8N5V2 710 aa19.9■□□□□ 0.78
SMG6-220ENST00000576218 YY1P25490 414 aa19.89■□□□□ 0.77
SMG6-220ENST00000576218 NFIXQ14938 502 aa19.89■□□□□ 0.77
SMG6-220ENST00000576218 C10orf71Q711Q0 1435 aa19.89■□□□□ 0.77
SMG6-220ENST00000576218 ZNF652Q9Y2D9 606 aa19.89■□□□□ 0.77
SMG6-220ENST00000576218 POLRMTO00411 1230 aaKnown RBP19.88■□□□□ 0.77
SMG6-220ENST00000576218 MYL6BP14649 208 aa19.88■□□□□ 0.77
SMG6-220ENST00000576218 EIF2S2P20042 333 aaKnown RBP19.88■□□□□ 0.77
SMG6-220ENST00000576218 SCN7AQ01118 1682 aa19.87■□□□□ 0.77
SMG6-220ENST00000576218 GRIN3BO60391 1043 aa19.87■□□□□ 0.77
SMG6-220ENST00000576218 TM4SF1P30408 202 aa19.87■□□□□ 0.77
SMG6-220ENST00000576218 TGFB2P61812 414 aa19.87■□□□□ 0.77
SMG6-220ENST00000576218 KIF6Q6ZMV9 814 aa19.87■□□□□ 0.77
SMG6-220ENST00000576218 SENP3-EIF4A1A0A087X0R7 540 aa19.86■□□□□ 0.77
SMG6-220ENST00000576218 NBPF26B4DH59 902 aa19.86■□□□□ 0.77
SMG6-220ENST00000576218 SERPINB2P05120 415 aa19.86■□□□□ 0.77
SMG6-220ENST00000576218 TBC1D9BQ66K14 1250 aa19.86■□□□□ 0.77
SMG6-220ENST00000576218 NBPF10Q6P3W6 841 aaKnown RBP19.86■□□□□ 0.77
SMG6-220ENST00000576218 NBPF15Q8N660 670 aa19.86■□□□□ 0.77
SMG6-220ENST00000576218 SETDB2Q96T68 719 aa19.86■□□□□ 0.77
SMG6-220ENST00000576218 BCL2L12Q9HB09 334 aa19.86■□□□□ 0.77
SMG6-220ENST00000576218 A0A0G2JLW4 131 aa19.85■□□□□ 0.77
SMG6-220ENST00000576218 CHL1O00533 1208 aa19.85■□□□□ 0.77
SMG6-220ENST00000576218 CAMTA2O94983 1202 aa19.85■□□□□ 0.77
SMG6-220ENST00000576218 FAM9BQ8IZU0 186 aa19.85■□□□□ 0.77
SMG6-220ENST00000576218 CFAP44Q96MT7 982 aa19.85■□□□□ 0.77
SMG6-220ENST00000576218 PXDNLA1KZ92 1463 aa19.85■□□□□ 0.77
SMG6-220ENST00000576218 CARMIL3Q8ND23 1372 aa19.84■□□□□ 0.77
SMG6-220ENST00000576218 YBX3P16989 372 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMG6-220ENST00000576218 GNAI1P63096 354 aa19.84■□□□□ 0.77
SMG6-220ENST00000576218 NECTIN2Q92692 538 aa19.84■□□□□ 0.77
SMG6-220ENST00000576218 ERBB4Q15303 1308 aa19.83■□□□□ 0.77
SMG6-220ENST00000576218 DPEP1P16444 411 aa19.83■□□□□ 0.77
SMG6-220ENST00000576218 BCS1LQ9Y276 419 aa19.83■□□□□ 0.77
SMG6-220ENST00000576218 IFT57Q9NWB7 429 aa19.82■□□□□ 0.76
SMG6-220ENST00000576218 KIF13BQ9NQT8 1826 aa19.81■□□□□ 0.76
SMG6-220ENST00000576218 BCORQ6W2J9 1755 aa19.81■□□□□ 0.76
SMG6-220ENST00000576218 ST5P78524 1137 aa19.81■□□□□ 0.76
SMG6-220ENST00000576218 CLEC4GQ6UXB4 293 aa19.81■□□□□ 0.76
SMG6-220ENST00000576218 CNBD1Q8NA66 436 aa19.81■□□□□ 0.76
SMG6-220ENST00000576218 MBIPQ9NS73 344 aa19.81■□□□□ 0.76
SMG6-220ENST00000576218 N4BP2Q86UW6 1770 aaPredicted RBP19.8■□□□□ 0.76
SMG6-220ENST00000576218 HDGFL1Q5TGJ6 251 aa19.8■□□□□ 0.76
SMG6-220ENST00000576218 NBPF5PQ86XG9 351 aaPredicted RBP19.8■□□□□ 0.76
SMG6-220ENST00000576218 NIP7Q9Y221 180 aaKnown RBP eCLIP19.8■□□□□ 0.76
SMG6-220ENST00000576218 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
SMG6-220ENST00000576218 CHRNA5P30532 468 aa19.79■□□□□ 0.76
SMG6-220ENST00000576218 KRT24Q2M2I5 525 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms