RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 RC3H1Q5TC82 1133 aaKnown RBP20.41■□□□□ 0.86
LITAF-218ENST00000576036 STK32BQ9NY57 414 aa20.41■□□□□ 0.86
LITAF-218ENST00000576036 FANCIQ9NVI1 1328 aa20.41■□□□□ 0.86
LITAF-218ENST00000576036 HNRNPUQ00839 825 aaKnown RBP eCLIP20.4■□□□□ 0.86
LITAF-218ENST00000576036 R3HDM1Q15032 1099 aaKnown RBP20.4■□□□□ 0.86
LITAF-218ENST00000576036 PNPLA7Q6ZV29 1317 aa20.4■□□□□ 0.86
LITAF-218ENST00000576036 PDGFDQ9GZP0 370 aaPredicted RBP20.4■□□□□ 0.86
LITAF-218ENST00000576036 PSDA5PKW4 1024 aaPredicted RBP20.39■□□□□ 0.85
LITAF-218ENST00000576036 NBPF14Q5TI25 921 aa20.39■□□□□ 0.85
LITAF-218ENST00000576036 ZBTB1Q9Y2K1 713 aa20.39■□□□□ 0.85
LITAF-218ENST00000576036 C8orf58Q8NAV2 365 aa20.38■□□□□ 0.85
LITAF-218ENST00000576036 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
LITAF-218ENST00000576036 CCDC87Q9NVE4 849 aa20.38■□□□□ 0.85
LITAF-218ENST00000576036 BCORQ6W2J9 1755 aa20.37■□□□□ 0.85
LITAF-218ENST00000576036 A1BGP04217 495 aa20.37■□□□□ 0.85
LITAF-218ENST00000576036 TSPYL6Q8N831 410 aa20.37■□□□□ 0.85
LITAF-218ENST00000576036 AK7Q96M32 723 aa20.37■□□□□ 0.85
LITAF-218ENST00000576036 TEX13AQ9BXU3 409 aaPredicted RBP20.37■□□□□ 0.85
LITAF-218ENST00000576036 SOS1Q07889 1333 aaPredicted RBP20.36■□□□□ 0.85
LITAF-218ENST00000576036 NBPF26B4DH59 902 aa20.36■□□□□ 0.85
LITAF-218ENST00000576036 GNPATO15228 680 aa20.36■□□□□ 0.85
LITAF-218ENST00000576036 GOLGA2Q08379 1002 aa20.36■□□□□ 0.85
LITAF-218ENST00000576036 SLFN5Q08AF3 891 aa20.36■□□□□ 0.85
LITAF-218ENST00000576036 NBPF10Q6P3W6 841 aaKnown RBP20.36■□□□□ 0.85
LITAF-218ENST00000576036 TRMT2AQ8IZ69 625 aaKnown RBP20.36■□□□□ 0.85
LITAF-218ENST00000576036 NBPF15Q8N660 670 aa20.36■□□□□ 0.85
LITAF-218ENST00000576036 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
LITAF-218ENST00000576036 RPS6KA4O75676 772 aa20.35■□□□□ 0.85
LITAF-218ENST00000576036 PIP4K2AP48426 406 aaPredicted RBP20.35■□□□□ 0.85
LITAF-218ENST00000576036 DUSP27Q5VZP5 1158 aa20.35■□□□□ 0.85
LITAF-218ENST00000576036 COL23A1Q86Y22 540 aaPredicted RBP20.35■□□□□ 0.85
LITAF-218ENST00000576036 TFCP2L1Q9NZI6 479 aa20.35■□□□□ 0.85
LITAF-218ENST00000576036 STARD3NLO95772 234 aa20.34■□□□□ 0.85
LITAF-218ENST00000576036 CACNA1FO60840 1977 aa20.34■□□□□ 0.85
LITAF-218ENST00000576036 ZBED9Q6R2W3 1325 aa20.33■□□□□ 0.85
LITAF-218ENST00000576036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.33■□□□□ 0.85
LITAF-218ENST00000576036 SSFA2P28290 1259 aa20.33■□□□□ 0.85
LITAF-218ENST00000576036 E9PSI1 815 aa20.32■□□□□ 0.84
LITAF-218ENST00000576036 ELL2O00472 640 aaPredicted RBP20.32■□□□□ 0.84
LITAF-218ENST00000576036 PHF14O94880 888 aa20.32■□□□□ 0.84
LITAF-218ENST00000576036 HOXB7P09629 217 aa20.32■□□□□ 0.84
LITAF-218ENST00000576036 EIF5P55010 431 aaKnown RBP20.32■□□□□ 0.84
LITAF-218ENST00000576036 EXOSC9Q06265 439 aaKnown RBP20.32■□□□□ 0.84
LITAF-218ENST00000576036 PDIA6Q15084 440 aa20.32■□□□□ 0.84
LITAF-218ENST00000576036 LRP10Q7Z4F1 713 aa20.32■□□□□ 0.84
LITAF-218ENST00000576036 COL15A1P39059 1388 aa20.32■□□□□ 0.84
LITAF-218ENST00000576036 HMGB2P26583 209 aaKnown RBP20.31■□□□□ 0.84
LITAF-218ENST00000576036 CANXP27824 592 aaKnown RBP20.31■□□□□ 0.84
LITAF-218ENST00000576036 PROSER3Q2NL68 480 aa20.31■□□□□ 0.84
LITAF-218ENST00000576036 MYH16Q9H6N6 1097 aa20.31■□□□□ 0.84
LITAF-218ENST00000576036 RTCBQ9Y3I0 505 aaKnown RBP20.31■□□□□ 0.84
LITAF-218ENST00000576036 EIF2S2P20042 333 aaKnown RBP20.3■□□□□ 0.84
LITAF-218ENST00000576036 NECTIN2Q92692 538 aa20.3■□□□□ 0.84
LITAF-218ENST00000576036 NUP98P52948 1817 aa20.3■□□□□ 0.84
LITAF-218ENST00000576036 ARHGEF1Q92888 912 aaKnown RBP20.29■□□□□ 0.84
LITAF-218ENST00000576036 ERBB4Q15303 1308 aa20.28■□□□□ 0.84
LITAF-218ENST00000576036 ANXA1P04083 346 aa20.28■□□□□ 0.84
LITAF-218ENST00000576036 ADRA2BP18089 450 aa20.28■□□□□ 0.84
LITAF-218ENST00000576036 IL6STP40189 918 aaPredicted RBP20.28■□□□□ 0.84
LITAF-218ENST00000576036 TWISTNBQ3B726 338 aaPredicted RBP20.28■□□□□ 0.84
LITAF-218ENST00000576036 VAMP4O75379 141 aa20.27■□□□□ 0.84
LITAF-218ENST00000576036 HDGFL1Q5TGJ6 251 aa20.27■□□□□ 0.84
LITAF-218ENST00000576036 TRAPPC3LQ5T215 181 aa20.26■□□□□ 0.83
LITAF-218ENST00000576036 FLAD1Q8NFF5 587 aa20.26■□□□□ 0.83
LITAF-218ENST00000576036 CHPF2Q9P2E5 772 aa20.26■□□□□ 0.83
LITAF-218ENST00000576036 SRP68Q9UHB9 627 aaKnown RBP20.26■□□□□ 0.83
LITAF-218ENST00000576036 USP42Q9H9J4 1324 aaKnown RBP20.26■□□□□ 0.83
LITAF-218ENST00000576036 LRP5O75197 1615 aa20.25■□□□□ 0.83
LITAF-218ENST00000576036 BCL2L12Q9HB09 334 aa20.25■□□□□ 0.83
LITAF-218ENST00000576036 ANKRD36CQ5JPF3 1778 aa20.25■□□□□ 0.83
LITAF-218ENST00000576036 ARFGEF2Q9Y6D5 1785 aa20.25■□□□□ 0.83
LITAF-218ENST00000576036 MYL6BP14649 208 aa20.24■□□□□ 0.83
LITAF-218ENST00000576036 DDX21Q9NR30 783 aaKnown RBP eCLIP20.24■□□□□ 0.83
LITAF-218ENST00000576036 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
LITAF-218ENST00000576036 ZBTB7AO95365 584 aa20.23■□□□□ 0.83
LITAF-218ENST00000576036 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
LITAF-218ENST00000576036 CAMTA2O94983 1202 aa20.22■□□□□ 0.83
LITAF-218ENST00000576036 GYS1P13807 737 aa20.22■□□□□ 0.83
LITAF-218ENST00000576036 TTLL7Q6ZT98 887 aa20.22■□□□□ 0.83
LITAF-218ENST00000576036 SGIP1Q9BQI5 828 aa20.22■□□□□ 0.83
LITAF-218ENST00000576036 NARFQ9UHQ1 456 aa20.22■□□□□ 0.83
LITAF-218ENST00000576036 TBC1D2BQ9UPU7 963 aa20.22■□□□□ 0.83
LITAF-218ENST00000576036 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
LITAF-218ENST00000576036 MSH5O43196 834 aa20.21■□□□□ 0.83
LITAF-218ENST00000576036 RFC4P35249 363 aa20.21■□□□□ 0.83
LITAF-218ENST00000576036 USPL1Q5W0Q7 1092 aa20.21■□□□□ 0.83
LITAF-218ENST00000576036 MSL1Q68DK7 614 aa20.21■□□□□ 0.83
LITAF-218ENST00000576036 SLC16A10Q8TF71 515 aa20.21■□□□□ 0.83
LITAF-218ENST00000576036 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
LITAF-218ENST00000576036 DZIP3Q86Y13 1208 aaKnown RBP20.2■□□□□ 0.82
LITAF-218ENST00000576036 MTFR1LQ9H019 292 aa20.2■□□□□ 0.82
LITAF-218ENST00000576036 DBF4Q9UBU7 674 aaPredicted RBP20.2■□□□□ 0.82
LITAF-218ENST00000576036 A0A087WZG4 1122 aa20.19■□□□□ 0.82
LITAF-218ENST00000576036 PTGER2P43116 358 aa20.19■□□□□ 0.82
LITAF-218ENST00000576036 FKBP8Q14318 412 aa20.19■□□□□ 0.82
LITAF-218ENST00000576036 CCDC30Q5VVM6 783 aa20.19■□□□□ 0.82
LITAF-218ENST00000576036 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
LITAF-218ENST00000576036 ATF5Q9Y2D1 282 aaPredicted RBP20.19■□□□□ 0.82
LITAF-218ENST00000576036 G2E3Q7L622 706 aa20.18■□□□□ 0.82
LITAF-218ENST00000576036 PHAXQ9H814 394 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms