RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
NPLOC4-214ENST00000573876 FLAD1Q8NFF5 587 aa16.69■□□□□ 0.26
NPLOC4-214ENST00000573876 CCDC87Q9NVE4 849 aa16.69■□□□□ 0.26
NPLOC4-214ENST00000573876 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
NPLOC4-214ENST00000573876 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
NPLOC4-214ENST00000573876 ELL2O00472 640 aaPredicted RBP16.68■□□□□ 0.26
NPLOC4-214ENST00000573876 NPM2Q86SE8 214 aaKnown RBP16.68■□□□□ 0.26
NPLOC4-214ENST00000573876 USP16Q9Y5T5 823 aa16.68■□□□□ 0.26
NPLOC4-214ENST00000573876 PSDA5PKW4 1024 aaPredicted RBP16.67■□□□□ 0.26
NPLOC4-214ENST00000573876 RPS6KA4O75676 772 aa16.67■□□□□ 0.26
NPLOC4-214ENST00000573876 EXOSC9Q06265 439 aaKnown RBP16.67■□□□□ 0.26
NPLOC4-214ENST00000573876 CHMP4AQ9BY43 222 aa16.67■□□□□ 0.26
NPLOC4-214ENST00000573876 TJP1Q07157 1748 aa16.67■□□□□ 0.26
NPLOC4-214ENST00000573876 FANCIQ9NVI1 1328 aa16.67■□□□□ 0.26
NPLOC4-214ENST00000573876 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
NPLOC4-214ENST00000573876 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
NPLOC4-214ENST00000573876 MSH5O43196 834 aa16.66■□□□□ 0.26
NPLOC4-214ENST00000573876 HOXB7P09629 217 aa16.66■□□□□ 0.26
NPLOC4-214ENST00000573876 SSFA2P28290 1259 aa16.66■□□□□ 0.26
NPLOC4-214ENST00000573876 KRT24Q2M2I5 525 aa16.66■□□□□ 0.26
NPLOC4-214ENST00000573876 DUSP27Q5VZP5 1158 aa16.66■□□□□ 0.26
NPLOC4-214ENST00000573876 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
NPLOC4-214ENST00000573876 C8orf58Q8NAV2 365 aa16.66■□□□□ 0.26
NPLOC4-214ENST00000573876 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
NPLOC4-214ENST00000573876 PHF14O94880 888 aa16.65■□□□□ 0.26
NPLOC4-214ENST00000573876 ADRA2BP18089 450 aa16.65■□□□□ 0.26
NPLOC4-214ENST00000573876 EIF2S2P20042 333 aaKnown RBP16.65■□□□□ 0.26
NPLOC4-214ENST00000573876 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
NPLOC4-214ENST00000573876 TRAPPC3LQ5T215 181 aa16.65■□□□□ 0.26
NPLOC4-214ENST00000573876 ZBTB1Q9Y2K1 713 aa16.65■□□□□ 0.26
NPLOC4-214ENST00000573876 SOS1Q07889 1333 aaPredicted RBP16.65■□□□□ 0.26
NPLOC4-214ENST00000573876 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
NPLOC4-214ENST00000573876 A1BGP04217 495 aa16.64■□□□□ 0.25
NPLOC4-214ENST00000573876 MYH14Q7Z406 1995 aaKnown RBP16.64■□□□□ 0.25
NPLOC4-214ENST00000573876 A0A087WZG4 1122 aa16.63■□□□□ 0.25
NPLOC4-214ENST00000573876 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
NPLOC4-214ENST00000573876 TSPYL6Q8N831 410 aa16.63■□□□□ 0.25
NPLOC4-214ENST00000573876 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
NPLOC4-214ENST00000573876 ERBB4Q15303 1308 aa16.63■□□□□ 0.25
NPLOC4-214ENST00000573876 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
NPLOC4-214ENST00000573876 RFC4P35249 363 aa16.62■□□□□ 0.25
NPLOC4-214ENST00000573876 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
NPLOC4-214ENST00000573876 TWISTNBQ3B726 338 aaPredicted RBP16.61■□□□□ 0.25
NPLOC4-214ENST00000573876 COL23A1Q86Y22 540 aaPredicted RBP16.61■□□□□ 0.25
NPLOC4-214ENST00000573876 SLC16A10Q8TF71 515 aa16.61■□□□□ 0.25
NPLOC4-214ENST00000573876 NECTIN2Q92692 538 aa16.61■□□□□ 0.25
NPLOC4-214ENST00000573876 UBR3Q6ZT12 1888 aa16.61■□□□□ 0.25
NPLOC4-214ENST00000573876 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
NPLOC4-214ENST00000573876 VAMP4O75379 141 aa16.6■□□□□ 0.25
NPLOC4-214ENST00000573876 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
NPLOC4-214ENST00000573876 ARHGEF1Q92888 912 aaKnown RBP16.6■□□□□ 0.25
NPLOC4-214ENST00000573876 ARXQ96QS3 562 aa16.6■□□□□ 0.25
NPLOC4-214ENST00000573876 QSER1Q2KHR3 1735 aa16.59■□□□□ 0.25
NPLOC4-214ENST00000573876 ZPR1O75312 459 aa16.59■□□□□ 0.25
NPLOC4-214ENST00000573876 MYL6BP14649 208 aa16.59■□□□□ 0.25
NPLOC4-214ENST00000573876 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
NPLOC4-214ENST00000573876 CCDC30Q5VVM6 783 aa16.59■□□□□ 0.25
NPLOC4-214ENST00000573876 SMIM5Q71RC9 77 aa16.59■□□□□ 0.25
NPLOC4-214ENST00000573876 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
NPLOC4-214ENST00000573876 COL15A1P39059 1388 aa16.59■□□□□ 0.25
NPLOC4-214ENST00000573876 NBPF26B4DH59 902 aa16.58■□□□□ 0.24
NPLOC4-214ENST00000573876 NBPF10Q6P3W6 841 aaKnown RBP16.58■□□□□ 0.24
NPLOC4-214ENST00000573876 NBPF15Q8N660 670 aa16.58■□□□□ 0.24
NPLOC4-214ENST00000573876 DDX21Q9NR30 783 aaKnown RBP eCLIP16.58■□□□□ 0.24
NPLOC4-214ENST00000573876 TUBGCP6Q96RT7 1819 aa16.58■□□□□ 0.24
NPLOC4-214ENST00000573876 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
NPLOC4-214ENST00000573876 STK31Q9BXU1 1019 aa16.57■□□□□ 0.24
NPLOC4-214ENST00000573876 MTFR1LQ9H019 292 aa16.57■□□□□ 0.24
NPLOC4-214ENST00000573876 DBF4Q9UBU7 674 aaPredicted RBP16.57■□□□□ 0.24
NPLOC4-214ENST00000573876 ZBTB7AO95365 584 aa16.56■□□□□ 0.24
NPLOC4-214ENST00000573876 DZIP3Q86Y13 1208 aaKnown RBP16.56■□□□□ 0.24
NPLOC4-214ENST00000573876 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
NPLOC4-214ENST00000573876 HYPKQ9NX55 129 aa16.56■□□□□ 0.24
NPLOC4-214ENST00000573876 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
NPLOC4-214ENST00000573876 NARFQ9UHQ1 456 aa16.56■□□□□ 0.24
NPLOC4-214ENST00000573876 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
NPLOC4-214ENST00000573876 SPON1Q9HCB6 807 aa16.55■□□□□ 0.24
NPLOC4-214ENST00000573876 TBC1D2BQ9UPU7 963 aa16.55■□□□□ 0.24
NPLOC4-214ENST00000573876 USP42Q9H9J4 1324 aaKnown RBP16.54■□□□□ 0.24
NPLOC4-214ENST00000573876 ANXA1P04083 346 aa16.54■□□□□ 0.24
NPLOC4-214ENST00000573876 CT47B1P0C2W7 299 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-214ENST00000573876 PDIA6Q15084 440 aa16.54■□□□□ 0.24
NPLOC4-214ENST00000573876 NLGN1Q8N2Q7 840 aa16.54■□□□□ 0.24
NPLOC4-214ENST00000573876 SRP68Q9UHB9 627 aaKnown RBP16.54■□□□□ 0.24
NPLOC4-214ENST00000573876 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
NPLOC4-214ENST00000573876 POLD1P28340 1107 aa16.53■□□□□ 0.24
NPLOC4-214ENST00000573876 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
NPLOC4-214ENST00000573876 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
NPLOC4-214ENST00000573876 ZNF652Q9Y2D9 606 aa16.53■□□□□ 0.24
NPLOC4-214ENST00000573876 CASZ1Q86V15 1759 aa16.53■□□□□ 0.24
NPLOC4-214ENST00000573876 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
NPLOC4-214ENST00000573876 GYS1P13807 737 aa16.52■□□□□ 0.24
NPLOC4-214ENST00000573876 AIMP1Q12904 312 aaKnown RBP16.52■□□□□ 0.24
NPLOC4-214ENST00000573876 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
NPLOC4-214ENST00000573876 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
NPLOC4-214ENST00000573876 ZNF428Q96B54 188 aa16.52■□□□□ 0.24
NPLOC4-214ENST00000573876 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
NPLOC4-214ENST00000573876 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
NPLOC4-214ENST00000573876 SSH1Q8WYL5 1049 aa16.51■□□□□ 0.23
NPLOC4-214ENST00000573876 MAP3K15Q6ZN16 1313 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms