RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
POLR2A-202ENST00000573603 CHRNA5P30532 468 aa16.7■□□□□ 0.26
POLR2A-202ENST00000573603 PIM2Q9P1W9 311 aa16.7■□□□□ 0.26
POLR2A-202ENST00000573603 HSPA6P17066 643 aa16.69■□□□□ 0.26
POLR2A-202ENST00000573603 NRXN2Q9P2S2 1712 aa16.68■□□□□ 0.26
POLR2A-202ENST00000573603 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
POLR2A-202ENST00000573603 DALRD3Q5D0E6 543 aaKnown RBP16.68■□□□□ 0.26
POLR2A-202ENST00000573603 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
POLR2A-202ENST00000573603 DLEC1Q9Y238 1755 aa16.67■□□□□ 0.26
POLR2A-202ENST00000573603 SCN7AQ01118 1682 aa16.67■□□□□ 0.26
POLR2A-202ENST00000573603 CANXP27824 592 aaKnown RBP16.67■□□□□ 0.26
POLR2A-202ENST00000573603 TM4SF1P30408 202 aa16.67■□□□□ 0.26
POLR2A-202ENST00000573603 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
POLR2A-202ENST00000573603 NARFQ9UHQ1 456 aa16.67■□□□□ 0.26
POLR2A-202ENST00000573603 NFIXQ14938 502 aa16.66■□□□□ 0.26
POLR2A-202ENST00000573603 VSIG10Q8N0Z9 540 aa16.66■□□□□ 0.26
POLR2A-202ENST00000573603 NMRK2Q9NPI5 230 aa16.66■□□□□ 0.26
POLR2A-202ENST00000573603 TEFQ10587 303 aa16.65■□□□□ 0.26
POLR2A-202ENST00000573603 GAS2L2Q8NHY3 880 aa16.65■□□□□ 0.26
POLR2A-202ENST00000573603 GNAT3A8MTJ3 354 aa16.64■□□□□ 0.25
POLR2A-202ENST00000573603 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
POLR2A-202ENST00000573603 RNF181Q9P0P0 153 aa16.64■□□□□ 0.25
POLR2A-202ENST00000573603 ZNF330Q9Y3S2 320 aaPredicted RBP16.64■□□□□ 0.25
POLR2A-202ENST00000573603 CARMIL3Q8ND23 1372 aa16.64■□□□□ 0.25
POLR2A-202ENST00000573603 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.25
POLR2A-202ENST00000573603 SBF1O95248 1867 aa16.63■□□□□ 0.25
POLR2A-202ENST00000573603 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
POLR2A-202ENST00000573603 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
POLR2A-202ENST00000573603 ZNF496Q96IT1 587 aaPredicted RBP16.63■□□□□ 0.25
POLR2A-202ENST00000573603 STARD3NLO95772 234 aa16.62■□□□□ 0.25
POLR2A-202ENST00000573603 SERPINB2P05120 415 aa16.62■□□□□ 0.25
POLR2A-202ENST00000573603 PRKAR2BP31323 418 aa16.62■□□□□ 0.25
POLR2A-202ENST00000573603 RASSF7Q02833 373 aa16.62■□□□□ 0.25
POLR2A-202ENST00000573603 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
POLR2A-202ENST00000573603 TNRC6CQ9HCJ0 1690 aaKnown RBP16.62■□□□□ 0.25
POLR2A-202ENST00000573603 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
POLR2A-202ENST00000573603 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
POLR2A-202ENST00000573603 TIAM2Q8IVF5 1701 aa16.61■□□□□ 0.25
POLR2A-202ENST00000573603 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
POLR2A-202ENST00000573603 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
POLR2A-202ENST00000573603 TOMM70O94826 608 aa16.6■□□□□ 0.25
POLR2A-202ENST00000573603 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
POLR2A-202ENST00000573603 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
POLR2A-202ENST00000573603 A0A087WZG4 1122 aa16.59■□□□□ 0.25
POLR2A-202ENST00000573603 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
POLR2A-202ENST00000573603 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
POLR2A-202ENST00000573603 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
POLR2A-202ENST00000573603 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
POLR2A-202ENST00000573603 KCNQ3O43525 872 aa16.58■□□□□ 0.24
POLR2A-202ENST00000573603 TBC1D9BQ66K14 1250 aa16.58■□□□□ 0.24
POLR2A-202ENST00000573603 FMNL2Q96PY5 1086 aa16.58■□□□□ 0.24
POLR2A-202ENST00000573603 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
POLR2A-202ENST00000573603 KDM2BQ8NHM5 1336 aa16.58■□□□□ 0.24
POLR2A-202ENST00000573603 WDR90Q96KV7 1748 aa16.58■□□□□ 0.24
POLR2A-202ENST00000573603 CACNA1SQ13698 1873 aa16.57■□□□□ 0.24
POLR2A-202ENST00000573603 BTBD11A6QL63 1104 aa16.57■□□□□ 0.24
POLR2A-202ENST00000573603 APLP1P51693 650 aa16.57■□□□□ 0.24
POLR2A-202ENST00000573603 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
POLR2A-202ENST00000573603 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
POLR2A-202ENST00000573603 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
POLR2A-202ENST00000573603 A1BGP04217 495 aa16.56■□□□□ 0.24
POLR2A-202ENST00000573603 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
POLR2A-202ENST00000573603 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
POLR2A-202ENST00000573603 TTLL6Q8N841 843 aa16.56■□□□□ 0.24
POLR2A-202ENST00000573603 NUDCQ9Y266 331 aa16.56■□□□□ 0.24
POLR2A-202ENST00000573603 H0YIN7 160 aa16.55■□□□□ 0.24
POLR2A-202ENST00000573603 PPP2R1AP30153 589 aa16.55■□□□□ 0.24
POLR2A-202ENST00000573603 IL6STP40189 918 aaPredicted RBP16.55■□□□□ 0.24
POLR2A-202ENST00000573603 PIP4K2AP48426 406 aaPredicted RBP16.55■□□□□ 0.24
POLR2A-202ENST00000573603 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
POLR2A-202ENST00000573603 MCM10Q7L590 875 aa16.54■□□□□ 0.24
POLR2A-202ENST00000573603 RBM46Q8TBY0 533 aaKnown RBP16.54■□□□□ 0.24
POLR2A-202ENST00000573603 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
POLR2A-202ENST00000573603 PRAMEF22A3QJZ6 481 aa16.53■□□□□ 0.24
POLR2A-202ENST00000573603 NPHP1O15259 732 aa16.53■□□□□ 0.24
POLR2A-202ENST00000573603 LMNB1P20700 586 aa16.53■□□□□ 0.24
POLR2A-202ENST00000573603 PRELPP51888 382 aa16.53■□□□□ 0.24
POLR2A-202ENST00000573603 PRR5LQ6MZQ0 368 aa16.53■□□□□ 0.24
POLR2A-202ENST00000573603 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
POLR2A-202ENST00000573603 ZNF622Q969S3 477 aaKnown RBP eCLIP16.53■□□□□ 0.246e-9■■■□□ 15.9
POLR2A-202ENST00000573603 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
POLR2A-202ENST00000573603 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
POLR2A-202ENST00000573603 DCTN1Q14203 1278 aa16.52■□□□□ 0.24
POLR2A-202ENST00000573603 DZIP3Q86Y13 1208 aaKnown RBP16.52■□□□□ 0.24
POLR2A-202ENST00000573603 LAMB4A4D0S4 1761 aa16.51■□□□□ 0.23
POLR2A-202ENST00000573603 ZC3H4Q9UPT8 1303 aaKnown RBP16.51■□□□□ 0.23
POLR2A-202ENST00000573603 NFKBIEO00221 500 aa16.51■□□□□ 0.23
POLR2A-202ENST00000573603 HTRA3P83110 453 aa16.51■□□□□ 0.23
POLR2A-202ENST00000573603 CNBD1Q8NA66 436 aa16.51■□□□□ 0.23
POLR2A-202ENST00000573603 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
POLR2A-202ENST00000573603 USP16Q9Y5T5 823 aa16.51■□□□□ 0.23
POLR2A-202ENST00000573603 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
POLR2A-202ENST00000573603 DLG5Q8TDM6 1919 aa16.51■□□□□ 0.23
POLR2A-202ENST00000573603 FER1L6Q2WGJ9 1857 aa16.5■□□□□ 0.23
POLR2A-202ENST00000573603 PDE6BP35913 854 aa16.5■□□□□ 0.23
POLR2A-202ENST00000573603 IFFO2Q5TF58 517 aa16.5■□□□□ 0.23
POLR2A-202ENST00000573603 SETDB2Q96T68 719 aa16.5■□□□□ 0.23
POLR2A-202ENST00000573603 C21orf2O43822 256 aa16.49■□□□□ 0.23
POLR2A-202ENST00000573603 ST5P78524 1137 aa16.49■□□□□ 0.23
POLR2A-202ENST00000573603 FSTL1Q12841 308 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms