RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 ZNF496Q96IT1 587 aaPredicted RBP23.17■■□□□ 1.3
LITAF-211ENST00000572255 ATP10DQ9P241 1426 aa23.16■■□□□ 1.3
LITAF-211ENST00000572255 BRCA1P38398 1863 aaKnown RBP23.16■■□□□ 1.3
LITAF-211ENST00000572255 DPEP1P16444 411 aa23.16■■□□□ 1.3
LITAF-211ENST00000572255 HEG1Q9ULI3 1381 aa23.15■■□□□ 1.3
LITAF-211ENST00000572255 FCHSD2O94868 740 aa23.15■■□□□ 1.3
LITAF-211ENST00000572255 STARD3NLO95772 234 aa23.15■■□□□ 1.3
LITAF-211ENST00000572255 TM4SF1P30408 202 aa23.15■■□□□ 1.3
LITAF-211ENST00000572255 NARFQ9UHQ1 456 aa23.15■■□□□ 1.3
LITAF-211ENST00000572255 ADCY9O60503 1353 aa23.14■■□□□ 1.3
LITAF-211ENST00000572255 POLRMTO00411 1230 aaKnown RBP23.14■■□□□ 1.29
LITAF-211ENST00000572255 GIGYF1O75420 1035 aaPredicted RBP23.14■■□□□ 1.29
LITAF-211ENST00000572255 CANXP27824 592 aaKnown RBP23.14■■□□□ 1.29
LITAF-211ENST00000572255 C1QTNF8P60827 252 aa23.14■■□□□ 1.29
LITAF-211ENST00000572255 BCS1LQ9Y276 419 aa23.14■■□□□ 1.29
LITAF-211ENST00000572255 FMNL2Q96PY5 1086 aa23.12■■□□□ 1.29
LITAF-211ENST00000572255 TEX13AQ9BXU3 409 aaPredicted RBP23.12■■□□□ 1.29
LITAF-211ENST00000572255 AFDNP55196 1824 aaKnown RBP23.12■■□□□ 1.29
LITAF-211ENST00000572255 BTBD11A6QL63 1104 aa23.11■■□□□ 1.29
LITAF-211ENST00000572255 KCNA3P22001 575 aa23.11■■□□□ 1.29
LITAF-211ENST00000572255 KCNQ3O43525 872 aa23.1■■□□□ 1.29
LITAF-211ENST00000572255 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
LITAF-211ENST00000572255 NFIXQ14938 502 aa23.1■■□□□ 1.29
LITAF-211ENST00000572255 RTF1Q92541 710 aaKnown RBP23.1■■□□□ 1.29
LITAF-211ENST00000572255 BCL2L12Q9HB09 334 aa23.1■■□□□ 1.29
LITAF-211ENST00000572255 NRXN2Q9P2S2 1712 aa23.09■■□□□ 1.29
LITAF-211ENST00000572255 MCM10Q7L590 875 aa23.09■■□□□ 1.29
LITAF-211ENST00000572255 ARFGEF1Q9Y6D6 1849 aa23.09■■□□□ 1.29
LITAF-211ENST00000572255 A0A087WZG4 1122 aa23.08■■□□□ 1.29
LITAF-211ENST00000572255 GPBP1L1Q9HC44 474 aaPredicted RBP23.07■■□□□ 1.28
LITAF-211ENST00000572255 PIM2Q9P1W9 311 aa23.07■■□□□ 1.28
LITAF-211ENST00000572255 SCN7AQ01118 1682 aa23.06■■□□□ 1.28
LITAF-211ENST00000572255 HTATSF1O43719 755 aaKnown RBP23.06■■□□□ 1.28
LITAF-211ENST00000572255 CHRNA5P30532 468 aa23.06■■□□□ 1.28
LITAF-211ENST00000572255 DCTN1Q14203 1278 aa23.06■■□□□ 1.28
LITAF-211ENST00000572255 ARHGAP27Q6ZUM4 889 aa23.06■■□□□ 1.28
LITAF-211ENST00000572255 ZNF526Q8TF50 670 aaPredicted RBP23.06■■□□□ 1.28
LITAF-211ENST00000572255 A1BGP04217 495 aa23.05■■□□□ 1.28
LITAF-211ENST00000572255 IL6STP40189 918 aaPredicted RBP23.05■■□□□ 1.28
LITAF-211ENST00000572255 ZNF330Q9Y3S2 320 aaPredicted RBP23.05■■□□□ 1.28
LITAF-211ENST00000572255 DLG5Q8TDM6 1919 aa23.04■■□□□ 1.28
LITAF-211ENST00000572255 SERPINB2P05120 415 aa23.04■■□□□ 1.28
LITAF-211ENST00000572255 DALRD3Q5D0E6 543 aaKnown RBP23.04■■□□□ 1.28
LITAF-211ENST00000572255 TBC1D2BQ9UPU7 963 aa23.03■■□□□ 1.28
LITAF-211ENST00000572255 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
LITAF-211ENST00000572255 NEFMP07197 916 aa23.02■■□□□ 1.28
LITAF-211ENST00000572255 BICDL1Q6ZP65 573 aa23.02■■□□□ 1.28
LITAF-211ENST00000572255 USP16Q9Y5T5 823 aa23.01■■□□□ 1.27
LITAF-211ENST00000572255 DLEC1Q9Y238 1755 aa23.01■■□□□ 1.27
LITAF-211ENST00000572255 PRAMEF22A3QJZ6 481 aa23■■□□□ 1.27
LITAF-211ENST00000572255 SNRPA1P09661 255 aaKnown RBP23■■□□□ 1.27
LITAF-211ENST00000572255 TBC1D9BQ66K14 1250 aa23■■□□□ 1.27
LITAF-211ENST00000572255 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
LITAF-211ENST00000572255 BCORQ6W2J9 1755 aa22.99■■□□□ 1.27
LITAF-211ENST00000572255 TAF7Q15545 349 aaPredicted RBP22.99■■□□□ 1.27
LITAF-211ENST00000572255 PLEKHF1Q96S99 279 aa22.99■■□□□ 1.27
LITAF-211ENST00000572255 CARMIL3Q8ND23 1372 aa22.99■■□□□ 1.27
LITAF-211ENST00000572255 CAMTA2O94983 1202 aa22.97■■□□□ 1.27
LITAF-211ENST00000572255 PIP4K2AP48426 406 aaPredicted RBP22.97■■□□□ 1.27
LITAF-211ENST00000572255 ANKRD31Q8N7Z5 1873 aa22.96■■□□□ 1.27
LITAF-211ENST00000572255 RALBP1Q15311 655 aa22.96■■□□□ 1.27
LITAF-211ENST00000572255 NFE2L2Q16236 605 aa22.96■■□□□ 1.27
LITAF-211ENST00000572255 DZIP3Q86Y13 1208 aaKnown RBP22.96■■□□□ 1.27
LITAF-211ENST00000572255 MIS18AQ9NYP9 233 aa22.96■■□□□ 1.27
LITAF-211ENST00000572255 KDM3BQ7LBC6 1761 aa22.96■■□□□ 1.27
LITAF-211ENST00000572255 DDX10Q13206 875 aaKnown RBP22.95■■□□□ 1.26
LITAF-211ENST00000572255 C9orf131Q5VYM1 1079 aa22.95■■□□□ 1.26
LITAF-211ENST00000572255 C2CD5Q86YS7 1000 aa22.95■■□□□ 1.26
LITAF-211ENST00000572255 PNNQ9H307 717 aaKnown RBP22.95■■□□□ 1.26
LITAF-211ENST00000572255 LAMB4A4D0S4 1761 aa22.94■■□□□ 1.26
LITAF-211ENST00000572255 MAPK8IP3Q9UPT6 1336 aa22.94■■□□□ 1.26
LITAF-211ENST00000572255 H0YIN7 160 aa22.93■■□□□ 1.26
LITAF-211ENST00000572255 PNISRQ8TF01 805 aaKnown RBP22.93■■□□□ 1.26
LITAF-211ENST00000572255 SETDB2Q96T68 719 aa22.93■■□□□ 1.26
LITAF-211ENST00000572255 SBF1O95248 1867 aa22.93■■□□□ 1.26
LITAF-211ENST00000572255 KIF3CO14782 793 aa22.92■■□□□ 1.26
LITAF-211ENST00000572255 PRR5LQ6MZQ0 368 aa22.92■■□□□ 1.26
LITAF-211ENST00000572255 TTLL6Q8N841 843 aa22.92■■□□□ 1.26
LITAF-211ENST00000572255 THUMPD2Q9BTF0 503 aaKnown RBP22.92■■□□□ 1.26
LITAF-211ENST00000572255 NBPF26B4DH59 902 aa22.91■■□□□ 1.26
LITAF-211ENST00000572255 NBPF10Q6P3W6 841 aaKnown RBP22.91■■□□□ 1.26
LITAF-211ENST00000572255 CCDC24Q8N4L8 307 aa22.91■■□□□ 1.26
LITAF-211ENST00000572255 NBPF15Q8N660 670 aa22.91■■□□□ 1.26
LITAF-211ENST00000572255 BRIP1Q9BX63 1249 aa22.91■■□□□ 1.26
LITAF-211ENST00000572255 RNF181Q9P0P0 153 aa22.91■■□□□ 1.26
LITAF-211ENST00000572255 COL11A2P13942 1736 aaPredicted RBP22.91■■□□□ 1.26
LITAF-211ENST00000572255 CNBD1Q8NA66 436 aa22.9■■□□□ 1.26
LITAF-211ENST00000572255 CEP350Q5VT06 3117 aa22.89■■□□□ 1.26
LITAF-211ENST00000572255 PDE6BP35913 854 aa22.89■■□□□ 1.25
LITAF-211ENST00000572255 PDZRN3Q9UPQ7 1066 aa22.89■■□□□ 1.25
LITAF-211ENST00000572255 NPHP1O15259 732 aa22.88■■□□□ 1.25
LITAF-211ENST00000572255 CLEC4GQ6UXB4 293 aa22.88■■□□□ 1.25
LITAF-211ENST00000572255 ZNF652Q9Y2D9 606 aa22.88■■□□□ 1.25
LITAF-211ENST00000572255 MYBBP1AQ9BQG0 1328 aaKnown RBP22.87■■□□□ 1.25
LITAF-211ENST00000572255 EIF4A1P60842 406 aaKnown RBP22.87■■□□□ 1.25
LITAF-211ENST00000572255 RASSF7Q02833 373 aa22.87■■□□□ 1.25
LITAF-211ENST00000572255 ST5P78524 1137 aa22.86■■□□□ 1.25
LITAF-211ENST00000572255 ZNF622Q969S3 477 aaKnown RBP eCLIP22.86■■□□□ 1.25
LITAF-211ENST00000572255 NMRK2Q9NPI5 230 aa22.86■■□□□ 1.25
LITAF-211ENST00000572255 RGL2O15211 777 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms