RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TUBGCP6Q96RT7 1819 aa21.09■□□□□ 0.97
SCARF1-205ENST00000571272 CNPY2Q9Y2B0 182 aa21.09■□□□□ 0.97
SCARF1-205ENST00000571272 CSPP1Q1MSJ5 1256 aa21.09■□□□□ 0.97
SCARF1-205ENST00000571272 ADAMTS13Q76LX8 1427 aa21.09■□□□□ 0.97
SCARF1-205ENST00000571272 HDGFL1Q5TGJ6 251 aa21.08■□□□□ 0.97
SCARF1-205ENST00000571272 SSH3Q8TE77 659 aa21.08■□□□□ 0.97
SCARF1-205ENST00000571272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.08■□□□□ 0.96
SCARF1-205ENST00000571272 TNRQ92752 1358 aa21.08■□□□□ 0.96
SCARF1-205ENST00000571272 EIF2S2P20042 333 aaKnown RBP21.07■□□□□ 0.96
SCARF1-205ENST00000571272 RASEFQ8IZ41 740 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 RHPN1Q8TCX5 695 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 NALCNQ8IZF0 1738 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 PHF14O94880 888 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 NLRP6P59044 892 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 ZNF830Q96NB3 372 aaPredicted RBP21.07■□□□□ 0.96
SCARF1-205ENST00000571272 SNX14Q9Y5W7 946 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 SRGAP3O43295 1099 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 CPA1P15085 419 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 PI4K2BQ8TCG2 481 aa21.07■□□□□ 0.96
SCARF1-205ENST00000571272 TTC21AQ8NDW8 1320 aa21.06■□□□□ 0.96
SCARF1-205ENST00000571272 RPAP1Q9BWH6 1393 aaPredicted RBP21.06■□□□□ 0.96
SCARF1-205ENST00000571272 SGSM2O43147 1006 aa21.06■□□□□ 0.96
SCARF1-205ENST00000571272 TAF7Q15545 349 aaPredicted RBP21.06■□□□□ 0.96
SCARF1-205ENST00000571272 CWC27Q6UX04 472 aaKnown RBP21.06■□□□□ 0.96
SCARF1-205ENST00000571272 IL17RAQ96F46 866 aa21.06■□□□□ 0.96
SCARF1-205ENST00000571272 USP25Q9UHP3 1055 aa21.06■□□□□ 0.96
SCARF1-205ENST00000571272 SPG7Q9UQ90 795 aa21.06■□□□□ 0.96
SCARF1-205ENST00000571272 HTATSF1O43719 755 aaKnown RBP21.06■□□□□ 0.96
SCARF1-205ENST00000571272 AK2P54819 239 aa21.06■□□□□ 0.96
SCARF1-205ENST00000571272 ARID3AQ99856 593 aa21.05■□□□□ 0.96
SCARF1-205ENST00000571272 AOX1Q06278 1338 aa21.05■□□□□ 0.96
SCARF1-205ENST00000571272 RAD50Q92878 1312 aa21.05■□□□□ 0.96
SCARF1-205ENST00000571272 NBPF7P0C2Y1 421 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-205ENST00000571272 XRN1Q8IZH2 1706 aaKnown RBP21.05■□□□□ 0.96
SCARF1-205ENST00000571272 USHBP1Q8N6Y0 703 aa21.04■□□□□ 0.96
SCARF1-205ENST00000571272 RAB11FIP3O75154 756 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 ZSCAN22P10073 491 aaPredicted RBP21.03■□□□□ 0.96
SCARF1-205ENST00000571272 KIAA2012Q0VF49 1180 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 RUFY3Q7L099 469 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 TOPAZ1Q8N9V7 1692 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 LSG1Q9H089 658 aaKnown RBP21.03■□□□□ 0.96
SCARF1-205ENST00000571272 FIBPO43427 364 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 PLEKHG5O94827 1062 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 HCLS1P14317 486 aaPredicted RBP21.03■□□□□ 0.96
SCARF1-205ENST00000571272 SYT1P21579 422 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 AMOTL2Q9Y2J4 779 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 DNTTIP2Q5QJE6 756 aaKnown RBP21.03■□□□□ 0.96
SCARF1-205ENST00000571272 PKNOX2Q96KN3 472 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 TTC14Q96N46 770 aa21.03■□□□□ 0.96
SCARF1-205ENST00000571272 FMN2Q9NZ56 1722 aa21.02■□□□□ 0.96
SCARF1-205ENST00000571272 STX6O43752 255 aa21.02■□□□□ 0.96
SCARF1-205ENST00000571272 CCDC183Q5T5S1 534 aa21.02■□□□□ 0.96
SCARF1-205ENST00000571272 FAM208AQ9UK61 1670 aaKnown RBP21.02■□□□□ 0.96
SCARF1-205ENST00000571272 HOXC9P31274 260 aa21.02■□□□□ 0.95
SCARF1-205ENST00000571272 SASS6Q6UVJ0 657 aa21.02■□□□□ 0.95
SCARF1-205ENST00000571272 CNTROBQ8N137 903 aa21.02■□□□□ 0.95
SCARF1-205ENST00000571272 KIF1BPQ96EK5 621 aa21.02■□□□□ 0.95
SCARF1-205ENST00000571272 MAP3K5Q99683 1374 aa21.01■□□□□ 0.95
SCARF1-205ENST00000571272 POLA2Q14181 598 aa21.01■□□□□ 0.95
SCARF1-205ENST00000571272 LIMCH1Q9UPQ0 1083 aa21.01■□□□□ 0.95
SCARF1-205ENST00000571272 SMC3Q9UQE7 1217 aa21.01■□□□□ 0.95
SCARF1-205ENST00000571272 PTPRUQ92729 1446 aa21.01■□□□□ 0.95
SCARF1-205ENST00000571272 ANXA1P04083 346 aa21.01■□□□□ 0.95
SCARF1-205ENST00000571272 LARGE1O95461 756 aa21■□□□□ 0.95
SCARF1-205ENST00000571272 CASTP20810 708 aaKnown RBP21■□□□□ 0.95
SCARF1-205ENST00000571272 ADCY5O95622 1261 aa21■□□□□ 0.95
SCARF1-205ENST00000571272 PLCB2Q00722 1185 aa21■□□□□ 0.95
SCARF1-205ENST00000571272 TTC12Q9H892 705 aaPredicted RBP21■□□□□ 0.95
SCARF1-205ENST00000571272 DIP2BQ9P265 1576 aa21■□□□□ 0.95
SCARF1-205ENST00000571272 EPB41L2O43491 1005 aaKnown RBP20.99■□□□□ 0.95
SCARF1-205ENST00000571272 OS9Q13438 667 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-205ENST00000571272 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
SCARF1-205ENST00000571272 FAM184AQ8NB25 1140 aa20.99■□□□□ 0.95
SCARF1-205ENST00000571272 TMEM87AQ8NBN3 555 aa20.99■□□□□ 0.95
SCARF1-205ENST00000571272 DDX54Q8TDD1 881 aaKnown RBP20.99■□□□□ 0.95
SCARF1-205ENST00000571272 C17orf53Q8N3J3 647 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-205ENST00000571272 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.99■□□□□ 0.95
SCARF1-205ENST00000571272 PI4KAP2A4QPH2 592 aa20.99■□□□□ 0.95
SCARF1-205ENST00000571272 F13A1P00488 732 aa20.99■□□□□ 0.95
SCARF1-205ENST00000571272 CCDC83Q8IWF9 413 aa20.99■□□□□ 0.95
SCARF1-205ENST00000571272 PI4KAP1Q8N8J0 262 aa20.99■□□□□ 0.95
SCARF1-205ENST00000571272 UBE2HP62256 183 aa20.98■□□□□ 0.95
SCARF1-205ENST00000571272 CHPF2Q9P2E5 772 aa20.98■□□□□ 0.95
SCARF1-205ENST00000571272 DYNC1I1O14576 645 aa20.98■□□□□ 0.95
SCARF1-205ENST00000571272 UVSSAQ2YD98 709 aa20.97■□□□□ 0.95
SCARF1-205ENST00000571272 GIMAP6Q6P9H5 292 aa20.97■□□□□ 0.95
SCARF1-205ENST00000571272 C14orf37Q86TY3 774 aa20.97■□□□□ 0.95
SCARF1-205ENST00000571272 JARID2Q92833 1246 aaPredicted RBP20.97■□□□□ 0.95
SCARF1-205ENST00000571272 DIAPH3Q9NSV4 1193 aa20.97■□□□□ 0.95
SCARF1-205ENST00000571272 PTH1RQ03431 593 aa20.96■□□□□ 0.95
SCARF1-205ENST00000571272 ADCK5Q3MIX3 580 aa20.96■□□□□ 0.95
SCARF1-205ENST00000571272 DNM1Q05193 864 aaKnown RBP20.96■□□□□ 0.95
SCARF1-205ENST00000571272 PLEKHG1Q9ULL1 1385 aa20.96■□□□□ 0.95
SCARF1-205ENST00000571272 GJB2P29033 226 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 CEBPAP49715 358 aaPredicted RBP20.95■□□□□ 0.94
SCARF1-205ENST00000571272 PRPF40BQ6NWY9 871 aaKnown RBP20.95■□□□□ 0.94
SCARF1-205ENST00000571272 DNAAF4Q8WXU2 420 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 JAKMIP1Q96N16 626 aaKnown RBP20.95■□□□□ 0.94
SCARF1-205ENST00000571272 PXDNLA1KZ92 1463 aa20.95■□□□□ 0.94
SCARF1-205ENST00000571272 KCNQ3O43525 872 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms