RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 CCDC39Q9UFE4 941 aa20.48■□□□□ 0.87
PCDHB19P-201ENST00000570871 FLT4P35916 1363 aa20.47■□□□□ 0.87
PCDHB19P-201ENST00000570871 SRCIN1Q9C0H9 1055 aa20.47■□□□□ 0.87
PCDHB19P-201ENST00000570871 N4BP2Q86UW6 1770 aaPredicted RBP20.46■□□□□ 0.87
PCDHB19P-201ENST00000570871 SBNO1A3KN83 1393 aa20.46■□□□□ 0.87
PCDHB19P-201ENST00000570871 TSPY26PQ9H489 355 aa20.46■□□□□ 0.87
PCDHB19P-201ENST00000570871 GDPD2Q9HCC8 539 aa20.46■□□□□ 0.87
PCDHB19P-201ENST00000570871 MCM5P33992 734 aa20.46■□□□□ 0.87
PCDHB19P-201ENST00000570871 LRRC37A3O60309 1634 aa20.46■□□□□ 0.87
PCDHB19P-201ENST00000570871 IGSF1Q8N6C5 1336 aa20.46■□□□□ 0.87
PCDHB19P-201ENST00000570871 GADD45BO75293 160 aaPredicted RBP20.45■□□□□ 0.86
PCDHB19P-201ENST00000570871 IL1RAPL2Q9NP60 686 aa20.45■□□□□ 0.86
PCDHB19P-201ENST00000570871 STRCP1A6NGW2 1772 aa20.45■□□□□ 0.86
PCDHB19P-201ENST00000570871 USP44Q9H0E7 712 aa20.44■□□□□ 0.86
PCDHB19P-201ENST00000570871 RBM10P98175 930 aaKnown RBP20.44■□□□□ 0.86
PCDHB19P-201ENST00000570871 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
PCDHB19P-201ENST00000570871 STRCQ7RTU9 1775 aa20.43■□□□□ 0.86
PCDHB19P-201ENST00000570871 AMPHP49418 695 aa20.43■□□□□ 0.86
PCDHB19P-201ENST00000570871 AOX1Q06278 1338 aa20.43■□□□□ 0.86
PCDHB19P-201ENST00000570871 HSPA4P34932 840 aa20.43■□□□□ 0.86
PCDHB19P-201ENST00000570871 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
PCDHB19P-201ENST00000570871 NUTM1Q86Y26 1132 aa20.43■□□□□ 0.86
PCDHB19P-201ENST00000570871 SOS1Q07889 1333 aaPredicted RBP20.42■□□□□ 0.86
PCDHB19P-201ENST00000570871 TTC21AQ8NDW8 1320 aa20.42■□□□□ 0.86
PCDHB19P-201ENST00000570871 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
PCDHB19P-201ENST00000570871 GNAT3A8MTJ3 354 aa20.42■□□□□ 0.86
PCDHB19P-201ENST00000570871 HTATSF1O43719 755 aaKnown RBP20.42■□□□□ 0.86
PCDHB19P-201ENST00000570871 UBTFL1P0CB47 393 aaPredicted RBP20.42■□□□□ 0.86
PCDHB19P-201ENST00000570871 CSPP1Q1MSJ5 1256 aa20.42■□□□□ 0.86
PCDHB19P-201ENST00000570871 MAP4K4O95819 1239 aaPredicted RBP20.41■□□□□ 0.86
PCDHB19P-201ENST00000570871 SSH3Q8TE77 659 aa20.41■□□□□ 0.86
PCDHB19P-201ENST00000570871 UQCRHLA0A096LP55 91 aa20.4■□□□□ 0.86
PCDHB19P-201ENST00000570871 UQCRHP07919 91 aa20.4■□□□□ 0.86
PCDHB19P-201ENST00000570871 C14orf37Q86TY3 774 aa20.4■□□□□ 0.86
PCDHB19P-201ENST00000570871 ZMYND15Q9H091 742 aa20.4■□□□□ 0.86
PCDHB19P-201ENST00000570871 PXDNLA1KZ92 1463 aa20.4■□□□□ 0.86
PCDHB19P-201ENST00000570871 RPAP1Q9BWH6 1393 aaPredicted RBP20.39■□□□□ 0.86
PCDHB19P-201ENST00000570871 EPB41L2O43491 1005 aaKnown RBP20.39■□□□□ 0.86
PCDHB19P-201ENST00000570871 PLEKHG5O94827 1062 aa20.39■□□□□ 0.86
PCDHB19P-201ENST00000570871 PROSER2Q86WR7 435 aaPredicted RBP20.39■□□□□ 0.86
PCDHB19P-201ENST00000570871 IL17REQ8NFR9 667 aa20.39■□□□□ 0.85
PCDHB19P-201ENST00000570871 PHF14O94880 888 aa20.38■□□□□ 0.85
PCDHB19P-201ENST00000570871 PTMAP06454 111 aaKnown RBP20.38■□□□□ 0.85
PCDHB19P-201ENST00000570871 SURF6O75683 361 aaKnown RBP20.38■□□□□ 0.85
PCDHB19P-201ENST00000570871 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
PCDHB19P-201ENST00000570871 PI4K2BQ8TCG2 481 aa20.38■□□□□ 0.85
PCDHB19P-201ENST00000570871 FAM13BQ9NYF5 915 aa20.38■□□□□ 0.85
PCDHB19P-201ENST00000570871 RAD50Q92878 1312 aa20.37■□□□□ 0.85
PCDHB19P-201ENST00000570871 NWD1Q149M9 1564 aa20.37■□□□□ 0.85
PCDHB19P-201ENST00000570871 PHAXQ9H814 394 aaKnown RBP20.37■□□□□ 0.85
PCDHB19P-201ENST00000570871 SNX14Q9Y5W7 946 aa20.37■□□□□ 0.85
PCDHB19P-201ENST00000570871 PIK3C2AO00443 1686 aa20.37■□□□□ 0.85
PCDHB19P-201ENST00000570871 SGSM2O43147 1006 aa20.37■□□□□ 0.85
PCDHB19P-201ENST00000570871 NGDNQ8NEJ9 315 aaKnown RBP20.37■□□□□ 0.85
PCDHB19P-201ENST00000570871 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.37■□□□□ 0.85
PCDHB19P-201ENST00000570871 RAB11FIP3O75154 756 aa20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 TMEM87AQ8NBN3 555 aa20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 RHPN1Q8TCX5 695 aa20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 POLA2Q14181 598 aa20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 TTC14Q96N46 770 aa20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 CNPY2Q9Y2B0 182 aa20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 ADGRL3Q9HAR2 1447 aa20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 MAP3K5Q99683 1374 aa20.36■□□□□ 0.85
PCDHB19P-201ENST00000570871 HDGFL1Q5TGJ6 251 aa20.35■□□□□ 0.85
PCDHB19P-201ENST00000570871 RASEFQ8IZ41 740 aa20.35■□□□□ 0.85
PCDHB19P-201ENST00000570871 LARP6Q9BRS8 491 aaKnown RBP20.35■□□□□ 0.85
PCDHB19P-201ENST00000570871 LSG1Q9H089 658 aaKnown RBP20.35■□□□□ 0.85
PCDHB19P-201ENST00000570871 AK2P54819 239 aa20.34■□□□□ 0.85
PCDHB19P-201ENST00000570871 ZSCAN22P10073 491 aaPredicted RBP20.34■□□□□ 0.85
PCDHB19P-201ENST00000570871 SASS6Q6UVJ0 657 aa20.34■□□□□ 0.85
PCDHB19P-201ENST00000570871 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.85
PCDHB19P-201ENST00000570871 TPRNQ4KMQ1 711 aa20.33■□□□□ 0.85
PCDHB19P-201ENST00000570871 CCDC183Q5T5S1 534 aa20.33■□□□□ 0.85
PCDHB19P-201ENST00000570871 RUFY3Q7L099 469 aa20.33■□□□□ 0.85
PCDHB19P-201ENST00000570871 MPNDQ8N594 471 aa20.33■□□□□ 0.85
PCDHB19P-201ENST00000570871 FAM184AQ8NB25 1140 aa20.33■□□□□ 0.85
PCDHB19P-201ENST00000570871 SRGAP3O43295 1099 aa20.32■□□□□ 0.84
PCDHB19P-201ENST00000570871 HOXC9P31274 260 aa20.32■□□□□ 0.84
PCDHB19P-201ENST00000570871 ORAI2Q96SN7 254 aa20.32■□□□□ 0.84
PCDHB19P-201ENST00000570871 SYT1P21579 422 aa20.32■□□□□ 0.84
PCDHB19P-201ENST00000570871 NLRP6P59044 892 aa20.32■□□□□ 0.84
PCDHB19P-201ENST00000570871 UVSSAQ2YD98 709 aa20.32■□□□□ 0.84
PCDHB19P-201ENST00000570871 KIF1BPQ96EK5 621 aa20.32■□□□□ 0.84
PCDHB19P-201ENST00000570871 USP25Q9UHP3 1055 aa20.32■□□□□ 0.84
PCDHB19P-201ENST00000570871 DYNC1I1O14576 645 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 STX6O43752 255 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 CNTROBQ8N137 903 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 BABAM1Q9NWV8 329 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 LIMCH1Q9UPQ0 1083 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 NBPF7P0C2Y1 421 aaPredicted RBP20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 ESCO1Q5FWF5 840 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 NUTM2GQ5VZR2 741 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 CWC27Q6UX04 472 aaKnown RBP20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 SPG7Q9UQ90 795 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 TMEM94Q12767 1356 aa20.31■□□□□ 0.84
PCDHB19P-201ENST00000570871 LTV1Q96GA3 475 aaPredicted RBP20.3■□□□□ 0.84
PCDHB19P-201ENST00000570871 MAP7D2Q96T17 732 aa20.3■□□□□ 0.84
PCDHB19P-201ENST00000570871 CPA1P15085 419 aa20.3■□□□□ 0.84
PCDHB19P-201ENST00000570871 PKNOX2Q96KN3 472 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms