RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 STARD3NLO95772 234 aa22.02■■□□□ 1.12
EDC3-216ENST00000569561 EIF5P55010 431 aaKnown RBP22.02■■□□□ 1.12
EDC3-216ENST00000569561 TAF7Q15545 349 aaPredicted RBP22.02■■□□□ 1.12
EDC3-216ENST00000569561 THUMPD2Q9BTF0 503 aaKnown RBP22.02■■□□□ 1.12
EDC3-216ENST00000569561 TEX13AQ9BXU3 409 aaPredicted RBP22.02■■□□□ 1.12
EDC3-216ENST00000569561 FKBP8Q14318 412 aa22.01■■□□□ 1.11
EDC3-216ENST00000569561 C10orf71Q711Q0 1435 aa22■■□□□ 1.11
EDC3-216ENST00000569561 PRAMEF22A3QJZ6 481 aa22■■□□□ 1.11
EDC3-216ENST00000569561 TMPOP42166 694 aaKnown RBP22■■□□□ 1.11
EDC3-216ENST00000569561 BCL2L12Q9HB09 334 aa22■■□□□ 1.11
EDC3-216ENST00000569561 NARFQ9UHQ1 456 aa21.99■■□□□ 1.11
EDC3-216ENST00000569561 ADAMTS8Q9UP79 889 aa21.99■■□□□ 1.11
EDC3-216ENST00000569561 USP16Q9Y5T5 823 aa21.99■■□□□ 1.11
EDC3-216ENST00000569561 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
EDC3-216ENST00000569561 CANXP27824 592 aaKnown RBP21.98■■□□□ 1.11
EDC3-216ENST00000569561 DDR1Q08345 913 aa21.98■■□□□ 1.11
EDC3-216ENST00000569561 USPL1Q5W0Q7 1092 aa21.98■■□□□ 1.11
EDC3-216ENST00000569561 KIF13BQ9NQT8 1826 aa21.97■■□□□ 1.11
EDC3-216ENST00000569561 DCAF8L1A6NGE4 600 aa21.97■■□□□ 1.11
EDC3-216ENST00000569561 TM4SF1P30408 202 aa21.97■■□□□ 1.11
EDC3-216ENST00000569561 CCDC146Q8IYE0 955 aa21.97■■□□□ 1.11
EDC3-216ENST00000569561 RUNDC1Q96C34 613 aa21.97■■□□□ 1.11
EDC3-216ENST00000569561 MIS18AQ9NYP9 233 aa21.97■■□□□ 1.11
EDC3-216ENST00000569561 GOLGB1Q14789 3259 aaKnown RBP21.96■■□□□ 1.11
EDC3-216ENST00000569561 A1BGP04217 495 aa21.96■■□□□ 1.11
EDC3-216ENST00000569561 SNRPA1P09661 255 aaKnown RBP21.96■■□□□ 1.11
EDC3-216ENST00000569561 IL6STP40189 918 aaPredicted RBP21.96■■□□□ 1.11
EDC3-216ENST00000569561 RIPK4P57078 832 aa21.96■■□□□ 1.11
EDC3-216ENST00000569561 WDR43Q15061 677 aaKnown RBP eCLIP21.96■■□□□ 1.11
EDC3-216ENST00000569561 PNISRQ8TF01 805 aaKnown RBP21.96■■□□□ 1.11
EDC3-216ENST00000569561 KIAA1551Q9HCM1 1747 aa21.96■■□□□ 1.11
EDC3-216ENST00000569561 YBX3P16989 372 aaKnown RBP eCLIP21.95■■□□□ 1.1
EDC3-216ENST00000569561 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
EDC3-216ENST00000569561 POLRMTO00411 1230 aaKnown RBP21.94■■□□□ 1.1
EDC3-216ENST00000569561 ZPR1O75312 459 aa21.94■■□□□ 1.1
EDC3-216ENST00000569561 CCDC184Q52MB2 194 aa21.94■■□□□ 1.1
EDC3-216ENST00000569561 EIF4A1P60842 406 aaKnown RBP21.93■■□□□ 1.1
EDC3-216ENST00000569561 SCN7AQ01118 1682 aa21.93■■□□□ 1.1
EDC3-216ENST00000569561 TRIM35Q9UPQ4 493 aa21.93■■□□□ 1.1
EDC3-216ENST00000569561 RRP7AQ9Y3A4 280 aaKnown RBP21.93■■□□□ 1.1
EDC3-216ENST00000569561 PARP3Q9Y6F1 533 aa21.93■■□□□ 1.1
EDC3-216ENST00000569561 A0A087WZG4 1122 aa21.92■■□□□ 1.1
EDC3-216ENST00000569561 NFIXQ14938 502 aa21.92■■□□□ 1.1
EDC3-216ENST00000569561 GPR162Q16538 588 aa21.92■■□□□ 1.1
EDC3-216ENST00000569561 NBPF26B4DH59 902 aa21.91■■□□□ 1.1
EDC3-216ENST00000569561 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
EDC3-216ENST00000569561 LMOD3Q0VAK6 560 aa21.91■■□□□ 1.1
EDC3-216ENST00000569561 NBPF10Q6P3W6 841 aaKnown RBP21.91■■□□□ 1.1
EDC3-216ENST00000569561 NBPF15Q8N660 670 aa21.91■■□□□ 1.1
EDC3-216ENST00000569561 LAMB4A4D0S4 1761 aa21.9■■□□□ 1.1
EDC3-216ENST00000569561 NRXN2Q9P2S2 1712 aa21.9■■□□□ 1.1
EDC3-216ENST00000569561 BABAM1Q9NWV8 329 aa21.9■■□□□ 1.1
EDC3-216ENST00000569561 CAMTA2O94983 1202 aa21.89■■□□□ 1.09
EDC3-216ENST00000569561 YY1P25490 414 aa21.89■■□□□ 1.09
EDC3-216ENST00000569561 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.09
EDC3-216ENST00000569561 TGFB2P61812 414 aa21.89■■□□□ 1.09
EDC3-216ENST00000569561 TSPYL4Q9UJ04 414 aa21.87■■□□□ 1.09
EDC3-216ENST00000569561 TBC1D2BQ9UPU7 963 aa21.87■■□□□ 1.09
EDC3-216ENST00000569561 BCORQ6W2J9 1755 aa21.87■■□□□ 1.09
EDC3-216ENST00000569561 PELP1Q8IZL8 1130 aaKnown RBP21.86■■□□□ 1.09
EDC3-216ENST00000569561 CHL1O00533 1208 aa21.85■■□□□ 1.09
EDC3-216ENST00000569561 KCNA3P22001 575 aa21.85■■□□□ 1.09
EDC3-216ENST00000569561 NEUROD2Q15784 382 aa21.85■■□□□ 1.09
EDC3-216ENST00000569561 TBC1D9BQ66K14 1250 aa21.85■■□□□ 1.09
EDC3-216ENST00000569561 ZNF330Q9Y3S2 320 aaPredicted RBP21.85■■□□□ 1.09
EDC3-216ENST00000569561 GRIN3BO60391 1043 aa21.84■■□□□ 1.09
EDC3-216ENST00000569561 DPEP1P16444 411 aa21.84■■□□□ 1.09
EDC3-216ENST00000569561 DZIP3Q86Y13 1208 aaKnown RBP21.84■■□□□ 1.09
EDC3-216ENST00000569561 A0A0G2JLW4 131 aa21.83■■□□□ 1.09
EDC3-216ENST00000569561 APAF1O14727 1248 aa21.83■■□□□ 1.09
EDC3-216ENST00000569561 RGL2O15211 777 aa21.83■■□□□ 1.09
EDC3-216ENST00000569561 AFDNP55196 1824 aaKnown RBP21.83■■□□□ 1.08
EDC3-216ENST00000569561 N4BP2Q86UW6 1770 aaPredicted RBP21.82■■□□□ 1.08
EDC3-216ENST00000569561 ANP32CO43423 234 aa21.82■■□□□ 1.08
EDC3-216ENST00000569561 SERPINB2P05120 415 aa21.82■■□□□ 1.08
EDC3-216ENST00000569561 CARMIL3Q8ND23 1372 aa21.82■■□□□ 1.08
EDC3-216ENST00000569561 BRCA1P38398 1863 aaKnown RBP21.81■■□□□ 1.08
EDC3-216ENST00000569561 LRP10Q7Z4F1 713 aa21.81■■□□□ 1.08
EDC3-216ENST00000569561 WWC3Q9ULE0 1092 aa21.81■■□□□ 1.08
EDC3-216ENST00000569561 ERBB4Q15303 1308 aa21.8■■□□□ 1.08
EDC3-216ENST00000569561 CHD4Q14839 1912 aa21.8■■□□□ 1.08
EDC3-216ENST00000569561 CLEC4GQ6UXB4 293 aa21.8■■□□□ 1.08
EDC3-216ENST00000569561 ZNF853P0CG23 659 aa21.79■■□□□ 1.08
EDC3-216ENST00000569561 BICDL1Q6ZP65 573 aa21.79■■□□□ 1.08
EDC3-216ENST00000569561 PDIA6Q15084 440 aa21.78■■□□□ 1.08
EDC3-216ENST00000569561 CHRNA5P30532 468 aa21.77■■□□□ 1.08
EDC3-216ENST00000569561 KRT24Q2M2I5 525 aa21.77■■□□□ 1.08
EDC3-216ENST00000569561 NPM2Q86SE8 214 aaKnown RBP21.77■■□□□ 1.08
EDC3-216ENST00000569561 CFAP44Q96MT7 982 aa21.77■■□□□ 1.08
EDC3-216ENST00000569561 HLFQ16534 295 aa21.76■■□□□ 1.07
EDC3-216ENST00000569561 PRR5LQ6MZQ0 368 aa21.76■■□□□ 1.07
EDC3-216ENST00000569561 MRS2Q9HD23 443 aa21.76■■□□□ 1.07
EDC3-216ENST00000569561 ZNF784Q8NCA9 323 aaPredicted RBP21.75■■□□□ 1.07
EDC3-216ENST00000569561 ADCY9O60503 1353 aa21.74■■□□□ 1.07
EDC3-216ENST00000569561 ERVV-1B6SEH8 477 aa21.74■■□□□ 1.07
EDC3-216ENST00000569561 PROSER3Q2NL68 480 aa21.74■■□□□ 1.07
EDC3-216ENST00000569561 TTLL7Q6ZT98 887 aa21.74■■□□□ 1.07
EDC3-216ENST00000569561 SETDB2Q96T68 719 aa21.74■■□□□ 1.07
EDC3-216ENST00000569561 BCS1LQ9Y276 419 aa21.74■■□□□ 1.07
EDC3-216ENST00000569561 MAP3K15Q6ZN16 1313 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms