RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 ZBED9Q6R2W3 1325 aa16.39■□□□□ 0.21
NSMCE1-214ENST00000569236 RPS6KA4O75676 772 aa16.38■□□□□ 0.21
NSMCE1-214ENST00000569236 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
NSMCE1-214ENST00000569236 TRAPPC3LQ5T215 181 aa16.38■□□□□ 0.21
NSMCE1-214ENST00000569236 CCDC87Q9NVE4 849 aa16.38■□□□□ 0.21
NSMCE1-214ENST00000569236 STARD3NLO95772 234 aa16.38■□□□□ 0.21
NSMCE1-214ENST00000569236 ADRA2BP18089 450 aa16.37■□□□□ 0.21
NSMCE1-214ENST00000569236 INTS5Q6P9B9 1019 aaKnown RBP16.37■□□□□ 0.21
NSMCE1-214ENST00000569236 TSPYL4Q9UJ04 414 aa16.37■□□□□ 0.21
NSMCE1-214ENST00000569236 PTGER2P43116 358 aa16.36■□□□□ 0.21
NSMCE1-214ENST00000569236 PPP1R1BQ9UD71 204 aaPredicted RBP16.36■□□□□ 0.21
NSMCE1-214ENST00000569236 SNRPA1P09661 255 aaKnown RBP16.36■□□□□ 0.21
NSMCE1-214ENST00000569236 BABAM1Q9NWV8 329 aa16.36■□□□□ 0.21
NSMCE1-214ENST00000569236 POLD1P28340 1107 aa16.35■□□□□ 0.21
NSMCE1-214ENST00000569236 ARHGEF1Q92888 912 aaKnown RBP16.35■□□□□ 0.21
NSMCE1-214ENST00000569236 ZBTB1Q9Y2K1 713 aa16.35■□□□□ 0.21
NSMCE1-214ENST00000569236 COL24A1Q17RW2 1714 aa16.35■□□□□ 0.21
NSMCE1-214ENST00000569236 C4AP0C0L4 1744 aa16.34■□□□□ 0.21
NSMCE1-214ENST00000569236 RFC4P35249 363 aa16.34■□□□□ 0.21
NSMCE1-214ENST00000569236 SGIP1Q9BQI5 828 aa16.34■□□□□ 0.21
NSMCE1-214ENST00000569236 PRAMEF22A3QJZ6 481 aa16.33■□□□□ 0.21
NSMCE1-214ENST00000569236 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.21
NSMCE1-214ENST00000569236 EIF4A1P60842 406 aaKnown RBP16.33■□□□□ 0.21
NSMCE1-214ENST00000569236 MSL1Q68DK7 614 aa16.33■□□□□ 0.21
NSMCE1-214ENST00000569236 LAS1LQ9Y4W2 734 aaKnown RBP16.33■□□□□ 0.21
NSMCE1-214ENST00000569236 USP16Q9Y5T5 823 aa16.33■□□□□ 0.21
NSMCE1-214ENST00000569236 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.21
NSMCE1-214ENST00000569236 SENP3-EIF4A1A0A087X0R7 540 aa16.33■□□□□ 0.2
NSMCE1-214ENST00000569236 CALD1Q05682 793 aaKnown RBP16.33■□□□□ 0.2
NSMCE1-214ENST00000569236 SUPT16HQ9Y5B9 1047 aaKnown RBP16.33■□□□□ 0.2
NSMCE1-214ENST00000569236 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.2
NSMCE1-214ENST00000569236 COL15A1P39059 1388 aa16.32■□□□□ 0.2
NSMCE1-214ENST00000569236 CHL1O00533 1208 aa16.31■□□□□ 0.2
NSMCE1-214ENST00000569236 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
NSMCE1-214ENST00000569236 CFAP44Q96MT7 982 aa16.31■□□□□ 0.2
NSMCE1-214ENST00000569236 ARXQ96QS3 562 aa16.31■□□□□ 0.2
NSMCE1-214ENST00000569236 A1BGP04217 495 aa16.31■□□□□ 0.2
NSMCE1-214ENST00000569236 CCDC27Q2M243 656 aa16.31■□□□□ 0.2
NSMCE1-214ENST00000569236 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
NSMCE1-214ENST00000569236 NPM2Q86SE8 214 aaKnown RBP16.3■□□□□ 0.2
NSMCE1-214ENST00000569236 ZNF330Q9Y3S2 320 aaPredicted RBP16.3■□□□□ 0.2
NSMCE1-214ENST00000569236 USP42Q9H9J4 1324 aaKnown RBP16.29■□□□□ 0.2
NSMCE1-214ENST00000569236 ZPR1O75312 459 aa16.29■□□□□ 0.2
NSMCE1-214ENST00000569236 IL6STP40189 918 aaPredicted RBP16.29■□□□□ 0.2
NSMCE1-214ENST00000569236 EIF5P55010 431 aaKnown RBP16.29■□□□□ 0.2
NSMCE1-214ENST00000569236 NLGN1Q8N2Q7 840 aa16.29■□□□□ 0.2
NSMCE1-214ENST00000569236 A0A087WZG4 1122 aa16.28■□□□□ 0.2
NSMCE1-214ENST00000569236 GYS1P13807 737 aa16.28■□□□□ 0.2
NSMCE1-214ENST00000569236 GNAI1P63096 354 aa16.28■□□□□ 0.2
NSMCE1-214ENST00000569236 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
NSMCE1-214ENST00000569236 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
NSMCE1-214ENST00000569236 WWC1Q8IX03 1113 aa16.28■□□□□ 0.2
NSMCE1-214ENST00000569236 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
NSMCE1-214ENST00000569236 ZNF853P0CG23 659 aa16.27■□□□□ 0.2
NSMCE1-214ENST00000569236 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
NSMCE1-214ENST00000569236 MBIPQ9NS73 344 aa16.27■□□□□ 0.2
NSMCE1-214ENST00000569236 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
NSMCE1-214ENST00000569236 USPL1Q5W0Q7 1092 aa16.26■□□□□ 0.19
NSMCE1-214ENST00000569236 FHDC1Q9C0D6 1143 aaPredicted RBP16.26■□□□□ 0.19
NSMCE1-214ENST00000569236 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
NSMCE1-214ENST00000569236 NBPF26B4DH59 902 aa16.25■□□□□ 0.19
NSMCE1-214ENST00000569236 MMP10P09238 476 aa16.25■□□□□ 0.19
NSMCE1-214ENST00000569236 PRKCSHP14314 528 aaPredicted RBP16.25■□□□□ 0.19
NSMCE1-214ENST00000569236 NBPF10Q6P3W6 841 aaKnown RBP16.25■□□□□ 0.19
NSMCE1-214ENST00000569236 NGEFQ8N5V2 710 aa16.25■□□□□ 0.19
NSMCE1-214ENST00000569236 NBPF15Q8N660 670 aa16.25■□□□□ 0.19
NSMCE1-214ENST00000569236 EIF2S2P20042 333 aaKnown RBP16.24■□□□□ 0.19
NSMCE1-214ENST00000569236 FKBP8Q14318 412 aa16.24■□□□□ 0.19
NSMCE1-214ENST00000569236 KRT24Q2M2I5 525 aa16.24■□□□□ 0.19
NSMCE1-214ENST00000569236 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
NSMCE1-214ENST00000569236 NEFLP07196 543 aa16.23■□□□□ 0.19
NSMCE1-214ENST00000569236 SYT17Q9BSW7 474 aa16.23■□□□□ 0.19
NSMCE1-214ENST00000569236 ERBB4Q15303 1308 aa16.23■□□□□ 0.19
NSMCE1-214ENST00000569236 SCN7AQ01118 1682 aa16.23■□□□□ 0.19
NSMCE1-214ENST00000569236 ERICH6Q7L0X2 663 aa16.23■□□□□ 0.19
NSMCE1-214ENST00000569236 DZIP3Q86Y13 1208 aaKnown RBP16.23■□□□□ 0.19
NSMCE1-214ENST00000569236 IL16Q14005 1332 aa16.22■□□□□ 0.19
NSMCE1-214ENST00000569236 HOXB7P09629 217 aa16.22■□□□□ 0.19
NSMCE1-214ENST00000569236 WDR63Q8IWG1 891 aa16.22■□□□□ 0.19
NSMCE1-214ENST00000569236 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
NSMCE1-214ENST00000569236 MYL6BP14649 208 aa16.21■□□□□ 0.19
NSMCE1-214ENST00000569236 BCL2L12Q9HB09 334 aa16.21■□□□□ 0.19
NSMCE1-214ENST00000569236 BCORQ6W2J9 1755 aa16.21■□□□□ 0.18
NSMCE1-214ENST00000569236 DUSP27Q5VZP5 1158 aa16.21■□□□□ 0.18
NSMCE1-214ENST00000569236 TSR2Q969E8 191 aaKnown RBP16.21■□□□□ 0.18
NSMCE1-214ENST00000569236 HDGFL1Q5TGJ6 251 aa16.2■□□□□ 0.18
NSMCE1-214ENST00000569236 NECTIN2Q92692 538 aa16.2■□□□□ 0.18
NSMCE1-214ENST00000569236 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
NSMCE1-214ENST00000569236 TM4SF1P30408 202 aa16.19■□□□□ 0.18
NSMCE1-214ENST00000569236 CD2APQ9Y5K6 639 aa16.19■□□□□ 0.18
NSMCE1-214ENST00000569236 DDR1Q08345 913 aa16.18■□□□□ 0.18
NSMCE1-214ENST00000569236 NFIXQ14938 502 aa16.18■□□□□ 0.18
NSMCE1-214ENST00000569236 ZNF652Q9Y2D9 606 aa16.18■□□□□ 0.18
NSMCE1-214ENST00000569236 ELL2O00472 640 aaPredicted RBP16.18■□□□□ 0.18
NSMCE1-214ENST00000569236 PDIA6Q15084 440 aa16.18■□□□□ 0.18
NSMCE1-214ENST00000569236 KIF6Q6ZMV9 814 aa16.18■□□□□ 0.18
NSMCE1-214ENST00000569236 BICDL1Q6ZP65 573 aa16.18■□□□□ 0.18
NSMCE1-214ENST00000569236 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
NSMCE1-214ENST00000569236 CLEC4GQ6UXB4 293 aa16.17■□□□□ 0.18
NSMCE1-214ENST00000569236 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms