RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 BANK1Q8NDB2 785 aa7.9□□□□□ -1.14
SF3B3-210ENST00000567654 PRKRIP1Q9H875 184 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-210ENST00000567654 POM121Q96HA1 1249 aa7.89□□□□□ -1.15
SF3B3-210ENST00000567654 UNC93B1Q9H1C4 597 aa7.89□□□□□ -1.15
SF3B3-210ENST00000567654 EIF3AQ14152 1382 aaKnown RBP7.88□□□□□ -1.15
SF3B3-210ENST00000567654 TRAK1Q9UPV9 953 aa7.88□□□□□ -1.15
SF3B3-210ENST00000567654 ANKRD26Q9UPS8 1709 aa7.88□□□□□ -1.15
SF3B3-210ENST00000567654 CEP170BQ9Y4F5 1589 aaPredicted RBP7.88□□□□□ -1.15
SF3B3-210ENST00000567654 RGPD8O14715 1765 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-210ENST00000567654 SBNO2Q9Y2G9 1366 aa7.87□□□□□ -1.15
SF3B3-210ENST00000567654 TMF1P82094 1093 aa7.87□□□□□ -1.15
SF3B3-210ENST00000567654 CNGB1Q14028 1251 aaPredicted RBP7.87□□□□□ -1.15
SF3B3-210ENST00000567654 BAP1Q92560 729 aa7.87□□□□□ -1.15
SF3B3-210ENST00000567654 PRKD2Q9BZL6 878 aa7.87□□□□□ -1.15
SF3B3-210ENST00000567654 TBC1D2BQ9UPU7 963 aa7.87□□□□□ -1.15
SF3B3-210ENST00000567654 KIF20BQ96Q89 1820 aa7.87□□□□□ -1.15
SF3B3-210ENST00000567654 NLRP1Q9C000 1473 aa7.87□□□□□ -1.15
SF3B3-210ENST00000567654 YTHDC2Q9H6S0 1430 aaKnown RBP7.86□□□□□ -1.15
SF3B3-210ENST00000567654 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-210ENST00000567654 SETD1BQ9UPS6 1966 aaKnown RBP7.86□□□□□ -1.15
SF3B3-210ENST00000567654 USP32Q8NFA0 1604 aa7.86□□□□□ -1.15
SF3B3-210ENST00000567654 ZBTB24O43167 697 aaPredicted RBP7.86□□□□□ -1.15
SF3B3-210ENST00000567654 SLC19A1P41440 591 aa7.86□□□□□ -1.15
SF3B3-210ENST00000567654 CLUAP1Q96AJ1 413 aa7.86□□□□□ -1.15
SF3B3-210ENST00000567654 ESF1Q9H501 851 aaKnown RBP7.86□□□□□ -1.15
SF3B3-210ENST00000567654 SLIT1O75093 1534 aa7.86□□□□□ -1.15
SF3B3-210ENST00000567654 DLC1Q96QB1 1528 aa7.86□□□□□ -1.15
SF3B3-210ENST00000567654 CENPJQ9HC77 1338 aaPredicted RBP7.85□□□□□ -1.15
SF3B3-210ENST00000567654 AKAP12Q02952 1782 aa7.85□□□□□ -1.15
SF3B3-210ENST00000567654 CPS1P31327 1500 aa7.85□□□□□ -1.15
SF3B3-210ENST00000567654 GPR37L1O60883 481 aa7.85□□□□□ -1.15
SF3B3-210ENST00000567654 TRIM32Q13049 653 aa7.85□□□□□ -1.15
SF3B3-210ENST00000567654 GDPD2Q9HCC8 539 aa7.85□□□□□ -1.15
SF3B3-210ENST00000567654 ARHGAP23Q9P227 1491 aa7.85□□□□□ -1.15
SF3B3-210ENST00000567654 PARD3Q8TEW0 1356 aa7.84□□□□□ -1.15
SF3B3-210ENST00000567654 ITSN1Q15811 1721 aa7.84□□□□□ -1.15
SF3B3-210ENST00000567654 CENPBP07199 599 aaPredicted RBP7.84□□□□□ -1.15
SF3B3-210ENST00000567654 SKOR1P84550 965 aa7.84□□□□□ -1.15
SF3B3-210ENST00000567654 FLIIQ13045 1269 aa7.84□□□□□ -1.15
SF3B3-210ENST00000567654 PANK3Q9H999 370 aa7.84□□□□□ -1.15
SF3B3-210ENST00000567654 CHD2O14647 1828 aaKnown RBP7.84□□□□□ -1.15
SF3B3-210ENST00000567654 ADAMTS13Q76LX8 1427 aa7.84□□□□□ -1.15
SF3B3-210ENST00000567654 TMEM2Q9UHN6 1383 aa7.84□□□□□ -1.16
SF3B3-210ENST00000567654 PLEKHH1Q9ULM0 1364 aa7.84□□□□□ -1.16
SF3B3-210ENST00000567654 XRN1Q8IZH2 1706 aaKnown RBP7.83□□□□□ -1.16
SF3B3-210ENST00000567654 TOPAZ1Q8N9V7 1692 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 ABL2P42684 1182 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 FOXJ1Q92949 421 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 STK26Q9P289 416 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 FKBPLQ9UIM3 349 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 COG6Q9Y2V7 657 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 MON2Q7Z3U7 1717 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 METP08581 1390 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 SHPRHQ149N8 1683 aa7.83□□□□□ -1.16
SF3B3-210ENST00000567654 MED14O60244 1454 aa7.82□□□□□ -1.16
SF3B3-210ENST00000567654 SH3BP2P78314 561 aa7.82□□□□□ -1.16
SF3B3-210ENST00000567654 SPRYD7Q5W111 196 aa7.82□□□□□ -1.16
SF3B3-210ENST00000567654 NDUFB9Q9Y6M9 179 aa7.82□□□□□ -1.16
SF3B3-210ENST00000567654 LTKP29376 864 aa7.81□□□□□ -1.16
SF3B3-210ENST00000567654 RPIAP49247 311 aa7.81□□□□□ -1.16
SF3B3-210ENST00000567654 SAFB2Q14151 953 aaKnown RBP eCLIP7.81□□□□□ -1.16
SF3B3-210ENST00000567654 ZNF697Q5TEC3 545 aa7.81□□□□□ -1.16
SF3B3-210ENST00000567654 ZNF511Q8NB15 262 aa7.81□□□□□ -1.16
SF3B3-210ENST00000567654 MRS2Q9HD23 443 aa7.81□□□□□ -1.16
SF3B3-210ENST00000567654 LRPPRCP42704 1394 aaKnown RBP7.81□□□□□ -1.16
SF3B3-210ENST00000567654 CD163L1Q9NR16 1453 aa7.81□□□□□ -1.16
SF3B3-210ENST00000567654 NALCNQ8IZF0 1738 aa7.81□□□□□ -1.16
SF3B3-210ENST00000567654 ADGRB2O60241 1585 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 TECPR2O15040 1411 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 PTPRUQ92729 1446 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 FOXC1Q12948 553 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 CC2D1BQ5T0F9 858 aaKnown RBP7.8□□□□□ -1.16
SF3B3-210ENST00000567654 PRAM1Q96QH2 718 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 CARD14Q9BXL6 1004 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 KTN1Q86UP2 1357 aaKnown RBP7.8□□□□□ -1.16
SF3B3-210ENST00000567654 PLEKHG1Q9ULL1 1385 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 MAP2P11137 1827 aaKnown RBP7.8□□□□□ -1.16
SF3B3-210ENST00000567654 DIP2AQ14689 1571 aa7.8□□□□□ -1.16
SF3B3-210ENST00000567654 MYBBP1AQ9BQG0 1328 aaKnown RBP7.79□□□□□ -1.16
SF3B3-210ENST00000567654 MAGEB6P1A0A0J9YX57 407 aa7.79□□□□□ -1.16
SF3B3-210ENST00000567654 CD2BP2O95400 341 aaKnown RBP7.79□□□□□ -1.16
SF3B3-210ENST00000567654 IRF5Q13568 498 aa7.79□□□□□ -1.16
SF3B3-210ENST00000567654 AGERQ15109 404 aa7.79□□□□□ -1.16
SF3B3-210ENST00000567654 OCSTAMPQ9BR26 566 aa7.79□□□□□ -1.16
SF3B3-210ENST00000567654 NRKQ7Z2Y5 1582 aa7.79□□□□□ -1.16
SF3B3-210ENST00000567654 NSD3Q9BZ95 1437 aa7.78□□□□□ -1.16
SF3B3-210ENST00000567654 CDCA8Q53HL2 280 aa7.78□□□□□ -1.16
SF3B3-210ENST00000567654 WAPLQ7Z5K2 1190 aa7.78□□□□□ -1.16
SF3B3-210ENST00000567654 C14orf37Q86TY3 774 aa7.78□□□□□ -1.16
SF3B3-210ENST00000567654 FAM9BQ8IZU0 186 aa7.78□□□□□ -1.16
SF3B3-210ENST00000567654 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.78□□□□□ -1.16
SF3B3-210ENST00000567654 SLC12A5Q9H2X9 1139 aa7.78□□□□□ -1.16
SF3B3-210ENST00000567654 V9GY48 417 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-210ENST00000567654 ABCC11Q96J66 1382 aa7.78□□□□□ -1.16
SF3B3-210ENST00000567654 FMN2Q9NZ56 1722 aa7.78□□□□□ -1.16
SF3B3-210ENST00000567654 STRCP1A6NGW2 1772 aa7.77□□□□□ -1.17
SF3B3-210ENST00000567654 BRD4O60885 1362 aaPredicted RBP7.77□□□□□ -1.17
SF3B3-210ENST00000567654 ROBO2Q9HCK4 1378 aa7.77□□□□□ -1.17
SF3B3-210ENST00000567654 APBB1O00213 710 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms