RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 PRR36Q9H6K5 1346 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 GPTP24298 496 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 GABPB1Q06547 395 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-211ENST00000567188 MTHFSDQ2M296 383 aaKnown RBP7.11□□□□□ -1.27
CNOT1-211ENST00000567188 LRRFIP1Q32MZ4 808 aaKnown RBP7.11□□□□□ -1.27
CNOT1-211ENST00000567188 SLC4A2P04920 1241 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 NEXNQ0ZGT2 675 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 HSP90AB3PQ58FF7 597 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 RRP1P56182 461 aaKnown RBP7.11□□□□□ -1.27
CNOT1-211ENST00000567188 DYDC1Q8WWB3 177 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 SUDS3Q9H7L9 328 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-211ENST00000567188 PAF1Q8N7H5 531 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 GOLGA6L19H0YKK7 550 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 RAD21O60216 631 aa7.11□□□□□ -1.27
CNOT1-211ENST00000567188 CAGE1Q8TC20 777 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 MYO6Q9UM54 1294 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 PHLPP1O60346 1717 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 LAMC1P11047 1609 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 MPHOSPH10O00566 681 aaKnown RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 TMPOP42166 694 aaKnown RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 SARNPP82979 210 aaKnown RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 TWISTNBQ3B726 338 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 RUFY1Q96T51 708 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 RGPD8O14715 1765 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 SMIM5Q71RC9 77 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 PPP4R3BQ5MIZ7 849 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 CCAR1Q8IX12 1150 aaKnown RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 TESK2Q96S53 571 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 MYCBPQ99417 103 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 MRVI1Q9Y6F6 885 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 GNL2Q13823 731 aaKnown RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 RILPL2Q969X0 211 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 TRIM34Q9BYJ4 488 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 ZHX1Q9UKY1 873 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 TRIM37O94972 964 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 KRT24Q2M2I5 525 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 GBP3Q9H0R5 595 aa7.1□□□□□ -1.27
CNOT1-211ENST00000567188 ARHGEF28Q8N1W1 1705 aaKnown RBP7.1□□□□□ -1.27
CNOT1-211ENST00000567188 TULP4Q9NRJ4 1543 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 DDB1Q16531 1140 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 WWC2Q6AWC2 1192 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 FOXD4L1Q9NU39 408 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 LMTK2Q8IWU2 1503 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 SAMD1Q6SPF0 538 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-211ENST00000567188 MICALCLQ6ZW33 695 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 POLKQ9UBT6 870 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 DDX19BQ9UMR2 479 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 F6X3S4 739 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 REC8O95072 547 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 SLC4A8Q2Y0W8 1093 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 APBA3O96018 575 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 CT47B1P0C2W7 299 aaPredicted RBP7.09□□□□□ -1.27
CNOT1-211ENST00000567188 NFE2L2Q16236 605 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 ANKRD45Q5TZF3 282 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 IFT57Q9NWB7 429 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 SPATA31D1Q6ZQQ2 1576 aa7.09□□□□□ -1.27
CNOT1-211ENST00000567188 CT47A1Q5JQC4 288 aaPredicted RBP7.09□□□□□ -1.28
CNOT1-211ENST00000567188 NFATC2IPQ8NCF5 419 aa7.09□□□□□ -1.28
CNOT1-211ENST00000567188 LGR6Q9HBX8 967 aa7.09□□□□□ -1.28
CNOT1-211ENST00000567188 IL2RBP14784 551 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 VPS53Q5VIR6 699 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 EYA1Q99502 592 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 RASSF4Q9H2L5 321 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 GNAI1P63096 354 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 ZBTB3Q9H5J0 574 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 TTC21AQ8NDW8 1320 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 TUBB4AP04350 444 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 CCDC30Q5VVM6 783 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 ZPR1O75312 459 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 NF2P35240 595 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 SKAP1Q86WV1 359 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 TSPY26PQ9H489 355 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 ATP5J2-PTCD1G3V325 749 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 KIAA0232Q92628 1395 aa7.08□□□□□ -1.28
CNOT1-211ENST00000567188 WDHD1O75717 1129 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-211ENST00000567188 GBP2P32456 591 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-211ENST00000567188 MFAP1P55081 439 aaKnown RBP7.07□□□□□ -1.28
CNOT1-211ENST00000567188 NBPF6Q5VWK0 638 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 NBPF4Q96M43 638 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 EDC4Q6P2E9 1401 aaKnown RBP7.07□□□□□ -1.28
CNOT1-211ENST00000567188 ZKSCAN2Q63HK3 967 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 KRT222Q8N1A0 295 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 GPATCH11Q8N954 259 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 WDR70Q9NW82 654 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 AFF2P51816 1311 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 CCDC27Q2M243 656 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 DUSP27Q5VZP5 1158 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 FILIP1Q7Z7B0 1213 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 BACH2Q9BYV9 841 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 CPSF2Q9P2I0 782 aaKnown RBP7.07□□□□□ -1.28
CNOT1-211ENST00000567188 OFD1O75665 1012 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 BMS1Q14692 1282 aaKnown RBP7.07□□□□□ -1.28
CNOT1-211ENST00000567188 VPS37DQ86XT2 251 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 BECN2A8MW95 431 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 MAP3K19Q56UN5 1328 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 A0A1B0GUL7 405 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 HDGFL1Q5TGJ6 251 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 NUTM1Q86Y26 1132 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 NEUROD6Q96NK8 337 aa7.07□□□□□ -1.28
CNOT1-211ENST00000567188 MTMR7Q9Y216 660 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms