RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-208ENST00000567111 TSR2Q969E8 191 aaKnown RBP29.3■■■□□ 2.28
E4F1-208ENST00000567111 C4BP0C0L5 1744 aa29.29■■■□□ 2.28
E4F1-208ENST00000567111 HOXB7P09629 217 aa29.29■■■□□ 2.28
E4F1-208ENST00000567111 NPM2Q86SE8 214 aaKnown RBP29.29■■■□□ 2.28
E4F1-208ENST00000567111 CICQ96RK0 1608 aaPredicted RBP29.28■■■□□ 2.28
E4F1-208ENST00000567111 PRAMEF22A3QJZ6 481 aa29.28■■■□□ 2.28
E4F1-208ENST00000567111 INTS5Q6P9B9 1019 aaKnown RBP29.28■■■□□ 2.28
E4F1-208ENST00000567111 TJP1Q07157 1748 aa29.28■■■□□ 2.28
E4F1-208ENST00000567111 SOS1Q07889 1333 aaPredicted RBP29.27■■■□□ 2.28
E4F1-208ENST00000567111 TRAPPC3LQ5T215 181 aa29.27■■■□□ 2.28
E4F1-208ENST00000567111 DUSP27Q5VZP5 1158 aa29.27■■■□□ 2.28
E4F1-208ENST00000567111 PSDA5PKW4 1024 aaPredicted RBP29.26■■■□□ 2.27
E4F1-208ENST00000567111 CANXP27824 592 aaKnown RBP29.26■■■□□ 2.27
E4F1-208ENST00000567111 SSFA2P28290 1259 aa29.26■■■□□ 2.27
E4F1-208ENST00000567111 FANCIQ9NVI1 1328 aa29.25■■■□□ 2.27
E4F1-208ENST00000567111 MSH5O43196 834 aa29.25■■■□□ 2.27
E4F1-208ENST00000567111 A1BGP04217 495 aa29.25■■■□□ 2.27
E4F1-208ENST00000567111 ADRA2BP18089 450 aa29.25■■■□□ 2.27
E4F1-208ENST00000567111 EIF2S2P20042 333 aaKnown RBP29.25■■■□□ 2.27
E4F1-208ENST00000567111 SLFN5Q08AF3 891 aa29.25■■■□□ 2.27
E4F1-208ENST00000567111 SPINK5Q9NQ38 1064 aaPredicted RBP29.25■■■□□ 2.27
E4F1-208ENST00000567111 COL5A3P25940 1745 aaPredicted RBP29.25■■■□□ 2.27
E4F1-208ENST00000567111 KRT24Q2M2I5 525 aa29.24■■■□□ 2.27
E4F1-208ENST00000567111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.23■■■□□ 2.27
E4F1-208ENST00000567111 ELL2O00472 640 aaPredicted RBP29.23■■■□□ 2.27
E4F1-208ENST00000567111 C8orf58Q8NAV2 365 aa29.23■■■□□ 2.27
E4F1-208ENST00000567111 ZBTB1Q9Y2K1 713 aa29.23■■■□□ 2.27
E4F1-208ENST00000567111 PHF14O94880 888 aa29.22■■■□□ 2.27
E4F1-208ENST00000567111 IL6STP40189 918 aaPredicted RBP29.22■■■□□ 2.27
E4F1-208ENST00000567111 ERBB4Q15303 1308 aa29.21■■■□□ 2.27
E4F1-208ENST00000567111 A0A087WZG4 1122 aa29.21■■■□□ 2.27
E4F1-208ENST00000567111 ZBED9Q6R2W3 1325 aa29.2■■■□□ 2.27
E4F1-208ENST00000567111 PNPLA7Q6ZV29 1317 aa29.2■■■□□ 2.27
E4F1-208ENST00000567111 RFC4P35249 363 aa29.2■■■□□ 2.26
E4F1-208ENST00000567111 EXOSC9Q06265 439 aaKnown RBP29.2■■■□□ 2.26
E4F1-208ENST00000567111 TWISTNBQ3B726 338 aaPredicted RBP29.2■■■□□ 2.26
E4F1-208ENST00000567111 HDGFL1Q5TGJ6 251 aa29.2■■■□□ 2.26
E4F1-208ENST00000567111 SLC16A10Q8TF71 515 aa29.2■■■□□ 2.26
E4F1-208ENST00000567111 CDCA7LQ96GN5 454 aa29.2■■■□□ 2.26
E4F1-208ENST00000567111 MYH14Q7Z406 1995 aaKnown RBP29.2■■■□□ 2.26
E4F1-208ENST00000567111 COL23A1Q86Y22 540 aaPredicted RBP29.19■■■□□ 2.26
E4F1-208ENST00000567111 EIF5P55010 431 aaKnown RBP29.18■■■□□ 2.26
E4F1-208ENST00000567111 ARHGEF1Q92888 912 aaKnown RBP29.18■■■□□ 2.26
E4F1-208ENST00000567111 ZNF330Q9Y3S2 320 aaPredicted RBP29.18■■■□□ 2.26
E4F1-208ENST00000567111 CCDC30Q5VVM6 783 aa29.17■■■□□ 2.26
E4F1-208ENST00000567111 NECTIN2Q92692 538 aa29.17■■■□□ 2.26
E4F1-208ENST00000567111 TRMT2AQ8IZ69 625 aaKnown RBP29.16■■■□□ 2.26
E4F1-208ENST00000567111 TSPYL6Q8N831 410 aa29.16■■■□□ 2.26
E4F1-208ENST00000567111 ARXQ96QS3 562 aa29.16■■■□□ 2.26
E4F1-208ENST00000567111 UBR3Q6ZT12 1888 aa29.15■■■□□ 2.26
E4F1-208ENST00000567111 NBPF26B4DH59 902 aa29.15■■■□□ 2.26
E4F1-208ENST00000567111 NBPF10Q6P3W6 841 aaKnown RBP29.15■■■□□ 2.26
E4F1-208ENST00000567111 NBPF15Q8N660 670 aa29.15■■■□□ 2.26
E4F1-208ENST00000567111 DBF4Q9UBU7 674 aaPredicted RBP29.15■■■□□ 2.26
E4F1-208ENST00000567111 QSER1Q2KHR3 1735 aa29.14■■■□□ 2.26
E4F1-208ENST00000567111 LAMB4A4D0S4 1761 aa29.14■■■□□ 2.26
E4F1-208ENST00000567111 ZPR1O75312 459 aa29.14■■■□□ 2.26
E4F1-208ENST00000567111 SMIM5Q71RC9 77 aa29.14■■■□□ 2.26
E4F1-208ENST00000567111 DDX21Q9NR30 783 aaKnown RBP eCLIP29.14■■■□□ 2.26
E4F1-208ENST00000567111 MYL6BP14649 208 aa29.13■■■□□ 2.25
E4F1-208ENST00000567111 PIP4K2AP48426 406 aaPredicted RBP29.13■■■□□ 2.25
E4F1-208ENST00000567111 AMIGO3Q86WK7 504 aa29.13■■■□□ 2.25
E4F1-208ENST00000567111 VAMP4O75379 141 aa29.12■■■□□ 2.25
E4F1-208ENST00000567111 STK31Q9BXU1 1019 aa29.12■■■□□ 2.25
E4F1-208ENST00000567111 COL15A1P39059 1388 aa29.12■■■□□ 2.25
E4F1-208ENST00000567111 HYPKQ9NX55 129 aa29.11■■■□□ 2.25
E4F1-208ENST00000567111 NARFQ9UHQ1 456 aa29.11■■■□□ 2.25
E4F1-208ENST00000567111 PDGFDQ9GZP0 370 aaPredicted RBP29.1■■■□□ 2.25
E4F1-208ENST00000567111 TUBGCP6Q96RT7 1819 aa29.09■■■□□ 2.25
E4F1-208ENST00000567111 PDIA6Q15084 440 aa29.09■■■□□ 2.25
E4F1-208ENST00000567111 DZIP3Q86Y13 1208 aaKnown RBP29.09■■■□□ 2.25
E4F1-208ENST00000567111 MTFR1LQ9H019 292 aa29.09■■■□□ 2.25
E4F1-208ENST00000567111 CHPF2Q9P2E5 772 aa29.09■■■□□ 2.25
E4F1-208ENST00000567111 NLGN1Q8N2Q7 840 aa29.08■■■□□ 2.25
E4F1-208ENST00000567111 TBC1D2BQ9UPU7 963 aa29.08■■■□□ 2.25
E4F1-208ENST00000567111 ZBTB7AO95365 584 aa29.07■■■□□ 2.24
E4F1-208ENST00000567111 CT47B1P0C2W7 299 aaPredicted RBP29.07■■■□□ 2.24
E4F1-208ENST00000567111 ZNF428Q96B54 188 aa29.07■■■□□ 2.24
E4F1-208ENST00000567111 KIF6Q6ZMV9 814 aa29.06■■■□□ 2.24
E4F1-208ENST00000567111 YTHDC1Q96MU7 727 aaKnown RBP29.06■■■□□ 2.24
E4F1-208ENST00000567111 SPON1Q9HCB6 807 aa29.06■■■□□ 2.24
E4F1-208ENST00000567111 USP42Q9H9J4 1324 aaKnown RBP29.05■■■□□ 2.24
E4F1-208ENST00000567111 ANXA1P04083 346 aa29.05■■■□□ 2.24
E4F1-208ENST00000567111 PROSER3Q2NL68 480 aa29.04■■■□□ 2.24
E4F1-208ENST00000567111 USPL1Q5W0Q7 1092 aa29.04■■■□□ 2.24
E4F1-208ENST00000567111 SRP68Q9UHB9 627 aaKnown RBP29.04■■■□□ 2.24
E4F1-208ENST00000567111 ATF5Q9Y2D1 282 aaPredicted RBP29.04■■■□□ 2.24
E4F1-208ENST00000567111 SLC4A2P04920 1241 aa29.03■■■□□ 2.24
E4F1-208ENST00000567111 COPS6Q7L5N1 327 aa29.03■■■□□ 2.24
E4F1-208ENST00000567111 ZNF652Q9Y2D9 606 aa29.03■■■□□ 2.24
E4F1-208ENST00000567111 RGL2O15211 777 aa29.02■■■□□ 2.24
E4F1-208ENST00000567111 GYS1P13807 737 aa29.02■■■□□ 2.24
E4F1-208ENST00000567111 POLD1P28340 1107 aa29.02■■■□□ 2.24
E4F1-208ENST00000567111 AIMP1Q12904 312 aaKnown RBP29.02■■■□□ 2.24
E4F1-208ENST00000567111 XAGE3Q8WTP9 111 aa29.02■■■□□ 2.24
E4F1-208ENST00000567111 CASZ1Q86V15 1759 aa29.01■■■□□ 2.23
E4F1-208ENST00000567111 ERVV-1B6SEH8 477 aa29.01■■■□□ 2.23
E4F1-208ENST00000567111 CLEC4GQ6UXB4 293 aa29.01■■■□□ 2.23
E4F1-208ENST00000567111 TCERG1O14776 1098 aaKnown RBP29■■■□□ 2.23
E4F1-208ENST00000567111 LRP10Q7Z4F1 713 aa29■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms