RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
SF3B3-207ENST00000566095 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
SF3B3-207ENST00000566095 DZIP1LQ8IYY4 767 aaKnown RBP12.46□□□□□ -0.41
SF3B3-207ENST00000566095 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
SF3B3-207ENST00000566095 NOB1Q9ULX3 412 aaKnown RBP12.46□□□□□ -0.41
SF3B3-207ENST00000566095 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.42
SF3B3-207ENST00000566095 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-207ENST00000566095 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
SF3B3-207ENST00000566095 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
SF3B3-207ENST00000566095 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
SF3B3-207ENST00000566095 SIK1P57059 783 aa12.44□□□□□ -0.42
SF3B3-207ENST00000566095 FLIIQ13045 1269 aa12.44□□□□□ -0.42
SF3B3-207ENST00000566095 DDX19BQ9UMR2 479 aa12.44□□□□□ -0.42
SF3B3-207ENST00000566095 ZNF831Q5JPB2 1677 aa12.44□□□□□ -0.42
SF3B3-207ENST00000566095 RGS12O14924 1447 aa12.44□□□□□ -0.42
SF3B3-207ENST00000566095 ATP6V1AP38606 617 aa12.43□□□□□ -0.42
SF3B3-207ENST00000566095 CCT4P50991 539 aaKnown RBP12.43□□□□□ -0.42
SF3B3-207ENST00000566095 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
SF3B3-207ENST00000566095 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
SF3B3-207ENST00000566095 CICQ96RK0 1608 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-207ENST00000566095 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
SF3B3-207ENST00000566095 TRIM27P14373 513 aa12.42□□□□□ -0.42
SF3B3-207ENST00000566095 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
SF3B3-207ENST00000566095 SF3B2Q13435 895 aaKnown RBP12.42□□□□□ -0.42
SF3B3-207ENST00000566095 SLC27A3Q5K4L6 730 aa12.42□□□□□ -0.42
SF3B3-207ENST00000566095 POTEAQ6S8J7 498 aa12.42□□□□□ -0.42
SF3B3-207ENST00000566095 CCDC136Q96JN2 1154 aa12.42□□□□□ -0.42
SF3B3-207ENST00000566095 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
SF3B3-207ENST00000566095 A0A087WZG4 1122 aa12.41□□□□□ -0.42
SF3B3-207ENST00000566095 KCNQ2O43526 872 aa12.41□□□□□ -0.42
SF3B3-207ENST00000566095 PLIN1O60240 522 aa12.41□□□□□ -0.42
SF3B3-207ENST00000566095 MVPQ14764 893 aaKnown RBP12.41□□□□□ -0.42
SF3B3-207ENST00000566095 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
SF3B3-207ENST00000566095 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
SF3B3-207ENST00000566095 RGS17Q9UGC6 210 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-207ENST00000566095 USP16Q9Y5T5 823 aa12.41□□□□□ -0.42
SF3B3-207ENST00000566095 ABCC4O15439 1325 aa12.4□□□□□ -0.42
SF3B3-207ENST00000566095 BTAF1O14981 1849 aa12.4□□□□□ -0.42
SF3B3-207ENST00000566095 SBF2Q86WG5 1849 aa12.4□□□□□ -0.42
SF3B3-207ENST00000566095 TCERG1O14776 1098 aaKnown RBP12.4□□□□□ -0.42
SF3B3-207ENST00000566095 DNAJC10Q8IXB1 793 aa12.4□□□□□ -0.42
SF3B3-207ENST00000566095 CCNL1Q9UK58 526 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-207ENST00000566095 C5P01031 1676 aa12.4□□□□□ -0.42
SF3B3-207ENST00000566095 IBTKQ9P2D0 1353 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-207ENST00000566095 TRIM37O94972 964 aa12.39□□□□□ -0.43
SF3B3-207ENST00000566095 CYP19A1P11511 503 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-207ENST00000566095 MYL6BP14649 208 aa12.39□□□□□ -0.43
SF3B3-207ENST00000566095 IL6STP40189 918 aaPredicted RBP12.39□□□□□ -0.43
SF3B3-207ENST00000566095 RC3H1Q5TC82 1133 aaKnown RBP12.39□□□□□ -0.43
SF3B3-207ENST00000566095 KSR2Q6VAB6 950 aa12.39□□□□□ -0.43
SF3B3-207ENST00000566095 RIC3Q7Z5B4 369 aa12.39□□□□□ -0.43
SF3B3-207ENST00000566095 CLUAP1Q96AJ1 413 aa12.39□□□□□ -0.43
SF3B3-207ENST00000566095 CCDC87Q9NVE4 849 aa12.39□□□□□ -0.43
SF3B3-207ENST00000566095 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
SF3B3-207ENST00000566095 HSP90AB3PQ58FF7 597 aa12.38□□□□□ -0.43
SF3B3-207ENST00000566095 INTS3Q68E01 1043 aaKnown RBP12.38□□□□□ -0.43
SF3B3-207ENST00000566095 CENPQQ7L2Z9 268 aaPredicted RBP12.38□□□□□ -0.43
SF3B3-207ENST00000566095 PLBD2Q8NHP8 589 aa12.38□□□□□ -0.43
SF3B3-207ENST00000566095 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
SF3B3-207ENST00000566095 DNAAF4Q8WXU2 420 aa12.38□□□□□ -0.43
SF3B3-207ENST00000566095 PRAMEF22A3QJZ6 481 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 PLSCR1O15162 318 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 RGL2O15211 777 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 ALDH1L1O75891 902 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 FAM182BQ5T319 152 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 CCDC125Q86Z20 511 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 XAGE3Q8WTP9 111 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 CRBNQ96SW2 442 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 SRCIN1Q9C0H9 1055 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
SF3B3-207ENST00000566095 PI4KAP2A4QPH2 592 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 APBA3O96018 575 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 A1BGP04217 495 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 GNAI3P08754 354 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 CRKLP46109 303 aaKnown RBP12.36□□□□□ -0.43
SF3B3-207ENST00000566095 IRX6P78412 446 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-207ENST00000566095 AIMP1Q12904 312 aaKnown RBP12.36□□□□□ -0.43
SF3B3-207ENST00000566095 PDIA6Q15084 440 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 COPS6Q7L5N1 327 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 PI4KAP1Q8N8J0 262 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 PANK1Q8TE04 598 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 AK7Q96M32 723 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 PHAXQ9H814 394 aaKnown RBP12.36□□□□□ -0.43
SF3B3-207ENST00000566095 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 TJP1Q07157 1748 aa12.36□□□□□ -0.43
SF3B3-207ENST00000566095 LY75O60449 1722 aa12.35□□□□□ -0.43
SF3B3-207ENST00000566095 ADRA2BP18089 450 aa12.35□□□□□ -0.43
SF3B3-207ENST00000566095 BAG6P46379 1132 aa12.35□□□□□ -0.43
SF3B3-207ENST00000566095 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
SF3B3-207ENST00000566095 MAP3K2Q9Y2U5 619 aa12.35□□□□□ -0.43
SF3B3-207ENST00000566095 ZNF330Q9Y3S2 320 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-207ENST00000566095 RGPD3A6NKT7 1758 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-207ENST00000566095 RGPD4Q7Z3J3 1758 aa12.34□□□□□ -0.43
SF3B3-207ENST00000566095 ERVV-1B6SEH8 477 aa12.34□□□□□ -0.43
SF3B3-207ENST00000566095 HSP90B1P14625 803 aaKnown RBP12.34□□□□□ -0.43
SF3B3-207ENST00000566095 G2E3Q7L622 706 aa12.34□□□□□ -0.43
SF3B3-207ENST00000566095 LINS1Q8NG48 757 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms