RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 PNISRQ8TF01 805 aaKnown RBP22.17■■□□□ 1.14
USB1-211ENST00000565662 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
USB1-211ENST00000565662 DDX10Q13206 875 aaKnown RBP22.14■■□□□ 1.13
USB1-211ENST00000565662 ZNF496Q96IT1 587 aaPredicted RBP22.13■■□□□ 1.13
USB1-211ENST00000565662 NARFQ9UHQ1 456 aa22.13■■□□□ 1.13
USB1-211ENST00000565662 DLG5Q8TDM6 1919 aa22.13■■□□□ 1.13
USB1-211ENST00000565662 LMOD3Q0VAK6 560 aa22.12■■□□□ 1.13
USB1-211ENST00000565662 ZBTB1Q9Y2K1 713 aa22.12■■□□□ 1.13
USB1-211ENST00000565662 SCN7AQ01118 1682 aa22.11■■□□□ 1.13
USB1-211ENST00000565662 IL6STP40189 918 aaPredicted RBP22.11■■□□□ 1.13
USB1-211ENST00000565662 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
USB1-211ENST00000565662 TAF7Q15545 349 aaPredicted RBP22.1■■□□□ 1.13
USB1-211ENST00000565662 NFE2L2Q16236 605 aa22.1■■□□□ 1.13
USB1-211ENST00000565662 SMIM5Q71RC9 77 aa22.1■■□□□ 1.13
USB1-211ENST00000565662 LAMB4A4D0S4 1761 aa22.1■■□□□ 1.13
USB1-211ENST00000565662 PXDNLA1KZ92 1463 aa22.09■■□□□ 1.13
USB1-211ENST00000565662 RGL2O15211 777 aa22.09■■□□□ 1.13
USB1-211ENST00000565662 PLEKHF1Q96S99 279 aa22.09■■□□□ 1.13
USB1-211ENST00000565662 EIF5P55010 431 aaKnown RBP22.08■■□□□ 1.13
USB1-211ENST00000565662 MCM10Q7L590 875 aa22.08■■□□□ 1.13
USB1-211ENST00000565662 KDM3BQ7LBC6 1761 aa22.07■■□□□ 1.12
USB1-211ENST00000565662 UTRNP46939 3433 aa22.07■■□□□ 1.12
USB1-211ENST00000565662 KIAA1551Q9HCM1 1747 aa22.07■■□□□ 1.12
USB1-211ENST00000565662 FKBP8Q14318 412 aa22.07■■□□□ 1.12
USB1-211ENST00000565662 WDR43Q15061 677 aaKnown RBP eCLIP22.07■■□□□ 1.12
USB1-211ENST00000565662 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
USB1-211ENST00000565662 NRXN2Q9P2S2 1712 aa22.06■■□□□ 1.12
USB1-211ENST00000565662 YBX3P16989 372 aaKnown RBP eCLIP22.06■■□□□ 1.126e-6■□□□□ 10.9
USB1-211ENST00000565662 CANXP27824 592 aaKnown RBP22.06■■□□□ 1.12
USB1-211ENST00000565662 BABAM1Q9NWV8 329 aa22.06■■□□□ 1.12
USB1-211ENST00000565662 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
USB1-211ENST00000565662 PDZRN3Q9UPQ7 1066 aa22.06■■□□□ 1.12
USB1-211ENST00000565662 BRCA1P38398 1863 aaKnown RBP22.05■■□□□ 1.12
USB1-211ENST00000565662 TM4SF1P30408 202 aa22.05■■□□□ 1.12
USB1-211ENST00000565662 BCORQ6W2J9 1755 aa22.04■■□□□ 1.12
USB1-211ENST00000565662 POLRMTO00411 1230 aaKnown RBP22.04■■□□□ 1.12
USB1-211ENST00000565662 ZNF652Q9Y2D9 606 aa22.04■■□□□ 1.12
USB1-211ENST00000565662 ARFGEF1Q9Y6D6 1849 aa22.03■■□□□ 1.12
USB1-211ENST00000565662 N4BP2Q86UW6 1770 aaPredicted RBP22.03■■□□□ 1.12
USB1-211ENST00000565662 CARMIL3Q8ND23 1372 aa22.02■■□□□ 1.12
USB1-211ENST00000565662 ZNF784Q8NCA9 323 aaPredicted RBP22.02■■□□□ 1.12
USB1-211ENST00000565662 PRKRIP1Q9H875 184 aaPredicted RBP22.02■■□□□ 1.12
USB1-211ENST00000565662 AFDNP55196 1824 aaKnown RBP22.01■■□□□ 1.11
USB1-211ENST00000565662 DDR1Q08345 913 aa22■■□□□ 1.11
USB1-211ENST00000565662 CLEC4GQ6UXB4 293 aa22■■□□□ 1.11
USB1-211ENST00000565662 PIM2Q9P1W9 311 aa22■■□□□ 1.11
USB1-211ENST00000565662 GOLGB1Q14789 3259 aaKnown RBP22■■□□□ 1.11
USB1-211ENST00000565662 DCTN1Q14203 1278 aa21.99■■□□□ 1.11
USB1-211ENST00000565662 NFIXQ14938 502 aa21.99■■□□□ 1.11
USB1-211ENST00000565662 ERBB4Q15303 1308 aa21.99■■□□□ 1.11
USB1-211ENST00000565662 DLEC1Q9Y238 1755 aa21.99■■□□□ 1.11
USB1-211ENST00000565662 RUNDC1Q96C34 613 aa21.98■■□□□ 1.11
USB1-211ENST00000565662 ZNF330Q9Y3S2 320 aaPredicted RBP21.98■■□□□ 1.11
USB1-211ENST00000565662 SERPINB2P05120 415 aa21.97■■□□□ 1.11
USB1-211ENST00000565662 RIPK4P57078 832 aa21.97■■□□□ 1.11
USB1-211ENST00000565662 DZIP3Q86Y13 1208 aaKnown RBP21.97■■□□□ 1.11
USB1-211ENST00000565662 A1BGP04217 495 aa21.96■■□□□ 1.11
USB1-211ENST00000565662 DALRD3Q5D0E6 543 aaKnown RBP21.96■■□□□ 1.11
USB1-211ENST00000565662 SETDB2Q96T68 719 aa21.96■■□□□ 1.11
USB1-211ENST00000565662 BCL2L12Q9HB09 334 aa21.96■■□□□ 1.11
USB1-211ENST00000565662 BCS1LQ9Y276 419 aa21.96■■□□□ 1.11
USB1-211ENST00000565662 USP16Q9Y5T5 823 aa21.96■■□□□ 1.11
USB1-211ENST00000565662 KCNQ3O43525 872 aa21.95■■□□□ 1.1
USB1-211ENST00000565662 DPEP1P16444 411 aa21.95■■□□□ 1.1
USB1-211ENST00000565662 TMPOP42166 694 aaKnown RBP21.95■■□□□ 1.1
USB1-211ENST00000565662 A0A0G2JLW4 131 aa21.94■■□□□ 1.1
USB1-211ENST00000565662 NPHP1O15259 732 aa21.94■■□□□ 1.1
USB1-211ENST00000565662 PDE6BP35913 854 aa21.94■■□□□ 1.1
USB1-211ENST00000565662 TSPYL4Q9UJ04 414 aa21.94■■□□□ 1.1
USB1-211ENST00000565662 ADCY9O60503 1353 aa21.94■■□□□ 1.1
USB1-211ENST00000565662 CAMTA2O94983 1202 aa21.93■■□□□ 1.1
USB1-211ENST00000565662 EIF4A1P60842 406 aaKnown RBP21.93■■□□□ 1.1
USB1-211ENST00000565662 ST5P78524 1137 aa21.93■■□□□ 1.1
USB1-211ENST00000565662 ATP10DQ9P241 1426 aa21.93■■□□□ 1.1
USB1-211ENST00000565662 GIGYF1O75420 1035 aaPredicted RBP21.92■■□□□ 1.1
USB1-211ENST00000565662 CALD1Q05682 793 aaKnown RBP21.92■■□□□ 1.1
USB1-211ENST00000565662 TBC1D2BQ9UPU7 963 aa21.92■■□□□ 1.1
USB1-211ENST00000565662 CNBD1Q8NA66 436 aa21.91■■□□□ 1.1
USB1-211ENST00000565662 BRIP1Q9BX63 1249 aa21.91■■□□□ 1.1
USB1-211ENST00000565662 H0YIN7 160 aa21.9■■□□□ 1.1
USB1-211ENST00000565662 TBC1D9BQ66K14 1250 aa21.9■■□□□ 1.1
USB1-211ENST00000565662 ERVV-1B6SEH8 477 aa21.89■■□□□ 1.09
USB1-211ENST00000565662 KCNA3P22001 575 aa21.89■■□□□ 1.09
USB1-211ENST00000565662 KIF6Q6ZMV9 814 aa21.89■■□□□ 1.09
USB1-211ENST00000565662 ZC3H4Q9UPT8 1303 aaKnown RBP21.88■■□□□ 1.09
USB1-211ENST00000565662 BICDL1Q6ZP65 573 aa21.88■■□□□ 1.09
USB1-211ENST00000565662 HOXB7P09629 217 aa21.87■■□□□ 1.09
USB1-211ENST00000565662 TTLL6Q8N841 843 aa21.87■■□□□ 1.09
USB1-211ENST00000565662 CHMP4AQ9BY43 222 aa21.87■■□□□ 1.09
USB1-211ENST00000565662 GPBP1L1Q9HC44 474 aaPredicted RBP21.87■■□□□ 1.09
USB1-211ENST00000565662 ZNF316A6NFI3 1004 aaPredicted RBP21.86■■□□□ 1.09
USB1-211ENST00000565662 PRR5LQ6MZQ0 368 aa21.86■■□□□ 1.09
USB1-211ENST00000565662 ARHGAP27Q6ZUM4 889 aa21.86■■□□□ 1.09
USB1-211ENST00000565662 NYXQ9GZU5 481 aa21.86■■□□□ 1.09
USB1-211ENST00000565662 MIS18AQ9NYP9 233 aa21.86■■□□□ 1.09
USB1-211ENST00000565662 ADAMTS8Q9UP79 889 aa21.86■■□□□ 1.09
USB1-211ENST00000565662 IBTKQ9P2D0 1353 aaPredicted RBP21.86■■□□□ 1.09
USB1-211ENST00000565662 ARFGEF2Q9Y6D5 1785 aa21.85■■□□□ 1.09
USB1-211ENST00000565662 PRAMEF22A3QJZ6 481 aa21.85■■□□□ 1.09
USB1-211ENST00000565662 SOGA3Q5TF21 947 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms