RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 ATP10DQ9P241 1426 aa8.95□□□□□ -0.98
UBFD1-204ENST00000565634 LCE2BO14633 110 aa8.94□□□□□ -0.98
UBFD1-204ENST00000565634 PTGDRQ13258 359 aa8.94□□□□□ -0.98
UBFD1-204ENST00000565634 DNAJC5GQ8N7S2 189 aa8.94□□□□□ -0.98
UBFD1-204ENST00000565634 NGDNQ8NEJ9 315 aaKnown RBP8.94□□□□□ -0.98
UBFD1-204ENST00000565634 PRAM1Q96QH2 718 aa8.94□□□□□ -0.98
UBFD1-204ENST00000565634 PRKD2Q9BZL6 878 aa8.94□□□□□ -0.98
UBFD1-204ENST00000565634 SLF2Q8IX21 1173 aa8.93□□□□□ -0.98
UBFD1-204ENST00000565634 TNS4Q8IZW8 715 aa8.93□□□□□ -0.98
UBFD1-204ENST00000565634 MARCH10Q8NA82 808 aaPredicted RBP8.93□□□□□ -0.98
UBFD1-204ENST00000565634 PRR36Q9H6K5 1346 aa8.93□□□□□ -0.98
UBFD1-204ENST00000565634 ANKRD30BQ9BXX2 1392 aa8.93□□□□□ -0.98
UBFD1-204ENST00000565634 PEAK1Q9H792 1746 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 SSH2Q76I76 1423 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 PRAG1Q86YV5 1406 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 GPRASP1Q5JY77 1395 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 ABCC11Q96J66 1382 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 MINK1Q8N4C8 1332 aaPredicted RBP8.92□□□□□ -0.98
UBFD1-204ENST00000565634 ACIN1Q9UKV3 1341 aaKnown RBP8.92□□□□□ -0.98
UBFD1-204ENST00000565634 KCNQ4P56696 695 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 COPS2P61201 443 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 NEUROD1Q13562 356 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 TMEM132AQ24JP5 1023 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 ACSBG1Q96GR2 724 aa8.92□□□□□ -0.98
UBFD1-204ENST00000565634 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.92□□□□□ -0.98
UBFD1-204ENST00000565634 YTHDC2Q9H6S0 1430 aaKnown RBP8.91□□□□□ -0.98
UBFD1-204ENST00000565634 RPGRIP1LQ68CZ1 1315 aa8.91□□□□□ -0.98
UBFD1-204ENST00000565634 GFRA3O60609 400 aa8.91□□□□□ -0.98
UBFD1-204ENST00000565634 DDB1Q16531 1140 aa8.91□□□□□ -0.98
UBFD1-204ENST00000565634 ZNF827Q17R98 1081 aa8.91□□□□□ -0.98
UBFD1-204ENST00000565634 CFAP70Q5T0N1 1121 aa8.91□□□□□ -0.98
UBFD1-204ENST00000565634 POGKQ9P215 609 aa8.91□□□□□ -0.98
UBFD1-204ENST00000565634 PRELPP51888 382 aa8.9□□□□□ -0.98
UBFD1-204ENST00000565634 FAM161AQ3B820 660 aa8.9□□□□□ -0.98
UBFD1-204ENST00000565634 ADGRG1Q9Y653 693 aa8.9□□□□□ -0.98
UBFD1-204ENST00000565634 RGPD5Q99666 1765 aa8.9□□□□□ -0.98
UBFD1-204ENST00000565634 KNDC1Q76NI1 1749 aa8.9□□□□□ -0.98
UBFD1-204ENST00000565634 PARP4Q9UKK3 1724 aaKnown RBP8.9□□□□□ -0.98
UBFD1-204ENST00000565634 PHRF1Q9P1Y6 1649 aaKnown RBP8.9□□□□□ -0.99
UBFD1-204ENST00000565634 AKAP12Q02952 1782 aa8.89□□□□□ -0.99
UBFD1-204ENST00000565634 CCER1Q8TC90 406 aaPredicted RBP8.89□□□□□ -0.99
UBFD1-204ENST00000565634 NECTIN2Q92692 538 aa8.89□□□□□ -0.99
UBFD1-204ENST00000565634 V9GY48 417 aaPredicted RBP8.89□□□□□ -0.99
UBFD1-204ENST00000565634 RGPD3A6NKT7 1758 aaPredicted RBP8.89□□□□□ -0.99
UBFD1-204ENST00000565634 RGPD4Q7Z3J3 1758 aa8.89□□□□□ -0.99
UBFD1-204ENST00000565634 LAPTM4AQ15012 233 aa8.88□□□□□ -0.99
UBFD1-204ENST00000565634 TRAK1Q9UPV9 953 aa8.88□□□□□ -0.99
UBFD1-204ENST00000565634 OVOS2A0A0G2JMS6 1433 aa8.88□□□□□ -0.99
UBFD1-204ENST00000565634 OVOS2A0A0J9YW53 1432 aa8.88□□□□□ -0.99
UBFD1-204ENST00000565634 OVOS2Q6IE36 1432 aa8.88□□□□□ -0.99
UBFD1-204ENST00000565634 ZPR1O75312 459 aa8.87□□□□□ -0.99
UBFD1-204ENST00000565634 TOM1L2Q6ZVM7 507 aa8.87□□□□□ -0.99
UBFD1-204ENST00000565634 LRRC4BQ9NT99 713 aa8.87□□□□□ -0.99
UBFD1-204ENST00000565634 SEMA3EO15041 775 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 GRIN3BO60391 1043 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 DNAJB2P25686 324 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 POLD1P28340 1107 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 MSL1Q68DK7 614 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 ABTB2Q8N961 1025 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 RBM46Q8TBY0 533 aaKnown RBP8.86□□□□□ -0.99
UBFD1-204ENST00000565634 TMEM134Q9H6X4 195 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 TUBGCP6Q96RT7 1819 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
UBFD1-204ENST00000565634 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
UBFD1-204ENST00000565634 BLOC1S3Q6QNY0 202 aa8.85□□□□□ -0.99
UBFD1-204ENST00000565634 THRAP3Q9Y2W1 955 aaKnown RBP8.85□□□□□ -0.99
UBFD1-204ENST00000565634 PCDHB3Q9Y5E6 796 aa8.85□□□□□ -0.99
UBFD1-204ENST00000565634 MAP3K5Q99683 1374 aa8.85□□□□□ -0.99
UBFD1-204ENST00000565634 ATP7BP35670 1465 aa8.84□□□□□ -0.99
UBFD1-204ENST00000565634 SLC4A3P48751 1232 aa8.84□□□□□ -0.99
UBFD1-204ENST00000565634 TRAF7Q6Q0C0 670 aa8.84□□□□□ -0.99
UBFD1-204ENST00000565634 L3MBTL2Q969R5 705 aa8.84□□□□□ -0.99
UBFD1-204ENST00000565634 SIRT1Q96EB6 747 aa8.84□□□□□ -0.99
UBFD1-204ENST00000565634 C14orf93Q9H972 538 aaKnown RBP8.84□□□□□ -0.99
UBFD1-204ENST00000565634 TOPAZ1Q8N9V7 1692 aa8.84□□□□□ -0.99
UBFD1-204ENST00000565634 PCNTO95613 3336 aa8.83□□□□□ -1
UBFD1-204ENST00000565634 WASLO00401 505 aaPredicted RBP8.83□□□□□ -1
UBFD1-204ENST00000565634 NRG2O14511 850 aaPredicted RBP8.83□□□□□ -1
UBFD1-204ENST00000565634 GCP02774 474 aa8.83□□□□□ -1
UBFD1-204ENST00000565634 NUDT16Q96DE0 195 aaKnown RBP8.83□□□□□ -1
UBFD1-204ENST00000565634 TMUB1Q9BVT8 246 aa8.83□□□□□ -1
UBFD1-204ENST00000565634 LMO7Q8WWI1 1683 aa8.83□□□□□ -1
UBFD1-204ENST00000565634 PNPLA7Q6ZV29 1317 aa8.82□□□□□ -1
UBFD1-204ENST00000565634 BTAF1O14981 1849 aa8.82□□□□□ -1
UBFD1-204ENST00000565634 EXOC5O00471 708 aa8.82□□□□□ -1
UBFD1-204ENST00000565634 EMID1Q96A84 441 aaPredicted RBP8.82□□□□□ -1
UBFD1-204ENST00000565634 PRR14Q9BWN1 585 aa8.82□□□□□ -1
UBFD1-204ENST00000565634 WDR90Q96KV7 1748 aa8.82□□□□□ -1
UBFD1-204ENST00000565634 ACEP12821 1306 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 SPATA31E1Q6ZUB1 1445 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 FCHSD2O94868 740 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 SLC10A3P09131 477 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 GGCXP38435 758 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 SMIM5Q71RC9 77 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
UBFD1-204ENST00000565634 DCAF11Q8TEB1 546 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 KLRG1Q96E93 195 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 NMRK2Q9NPI5 230 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 TFCP2L1Q9NZI6 479 aa8.81□□□□□ -1
UBFD1-204ENST00000565634 WNK3Q9BYP7 1800 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms