RNA–Protein interactions for RNA: ENST00000564208.5

TAF1C-209, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 2

Gene TAF1C, Length 3,810 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-209	ENST00000564208	AMOT	Q4VCS5	1084 aa		13.83	□□□□□ -0.19
TAF1C-209	ENST00000564208	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.83	□□□□□ -0.19
TAF1C-209	ENST00000564208	DNAAF4	Q8WXU2	420 aa		13.83	□□□□□ -0.19
TAF1C-209	ENST00000564208	CASC1	Q6TDU7	716 aa		13.83	□□□□□ -0.2
TAF1C-209	ENST00000564208	USP44	Q9H0E7	712 aa		13.83	□□□□□ -0.2
TAF1C-209	ENST00000564208	LRRCC1	Q9C099	1032 aa		13.83	□□□□□ -0.2
TAF1C-209	ENST00000564208	CHMP3	Q9Y3E7	222 aa		13.83	□□□□□ -0.2
TAF1C-209	ENST00000564208	ERBB3	P21860	1342 aa		13.82	□□□□□ -0.2
TAF1C-209	ENST00000564208	NPHP3	Q7Z494	1330 aa		13.82	□□□□□ -0.2
TAF1C-209	ENST00000564208	TTC22	Q5TAA0	569 aa		13.82	□□□□□ -0.2
TAF1C-209	ENST00000564208	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.82	□□□□□ -0.2
TAF1C-209	ENST00000564208	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.82	□□□□□ -0.2
TAF1C-209	ENST00000564208	PA2G4	Q9UQ80	394 aa	Known RBP	13.82	□□□□□ -0.2
TAF1C-209	ENST00000564208	PTMA	P06454	111 aa	Known RBP	13.81	□□□□□ -0.2
TAF1C-209	ENST00000564208	MSN	P26038	577 aa	Known RBP	13.81	□□□□□ -0.2
TAF1C-209	ENST00000564208	SYTL4	Q96C24	671 aa	Predicted RBP	13.81	□□□□□ -0.2
TAF1C-209	ENST00000564208	C1orf167	Q5SNV9	1468 aa		13.81	□□□□□ -0.2
TAF1C-209	ENST00000564208	RRP9	O43818	475 aa	Known RBP	13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	CABP4	P57796	275 aa		13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	ANO2	Q9NQ90	1003 aa		13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	TOPAZ1	Q8N9V7	1692 aa		13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	ATP5J2-PTCD1	G3V325	749 aa		13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	DBF4	Q9UBU7	674 aa	Predicted RBP	13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	NALCN	Q8IZF0	1738 aa		13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	NRK	Q7Z2Y5	1582 aa		13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	GBP4	Q96PP9	640 aa		13.8	□□□□□ -0.2
TAF1C-209	ENST00000564208	SPG7	Q9UQ90	795 aa		13.79	□□□□□ -0.2
TAF1C-209	ENST00000564208	XRN1	Q8IZH2	1706 aa	Known RBP	13.79	□□□□□ -0.2
TAF1C-209	ENST00000564208	KLHDC4	Q8TBB5	520 aa		13.79	□□□□□ -0.2
TAF1C-209	ENST00000564208	TNPO1	Q92973	898 aa	Known RBP	13.79	□□□□□ -0.2
TAF1C-209	ENST00000564208	RGS12	O14924	1447 aa		13.79	□□□□□ -0.2
TAF1C-209	ENST00000564208	CD2BP2	O95400	341 aa	Known RBP	13.79	□□□□□ -0.2
TAF1C-209	ENST00000564208	ZNF496	Q96IT1	587 aa	Predicted RBP	13.79	□□□□□ -0.2
TAF1C-209	ENST00000564208	GIGYF1	O75420	1035 aa	Predicted RBP	13.78	□□□□□ -0.2
TAF1C-209	ENST00000564208	PDE1A	P54750	535 aa		13.78	□□□□□ -0.2
TAF1C-209	ENST00000564208	MX1	P20591	662 aa		13.78	□□□□□ -0.2
TAF1C-209	ENST00000564208	COPS6	Q7L5N1	327 aa		13.78	□□□□□ -0.2
TAF1C-209	ENST00000564208	SLAIN2	Q9P270	581 aa		13.78	□□□□□ -0.2
TAF1C-209	ENST00000564208	USP16	Q9Y5T5	823 aa		13.78	□□□□□ -0.2
TAF1C-209	ENST00000564208	ERBB4	Q15303	1308 aa		13.77	□□□□□ -0.2
TAF1C-209	ENST00000564208	ATP8B2	P98198	1209 aa		13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	ZNF790	Q6PG37	636 aa		13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	BRINP3	Q76B58	766 aa		13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	XAGE3	Q8WTP9	111 aa		13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	PXDN	Q92626	1479 aa		13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	MYD88	Q99836	296 aa		13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	GAS2L3	Q86XJ1	694 aa		13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	IFNL2	Q8IZJ0	200 aa		13.77	□□□□□ -0.21
TAF1C-209	ENST00000564208	FMN2	Q9NZ56	1722 aa		13.76	□□□□□ -0.21
TAF1C-209	ENST00000564208	DTNB	O60941	627 aa		13.76	□□□□□ -0.21
TAF1C-209	ENST00000564208	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.76	□□□□□ -0.21
TAF1C-209	ENST00000564208	ATP10D	Q9P241	1426 aa		13.76	□□□□□ -0.21
TAF1C-209	ENST00000564208	CYP27B1	O15528	508 aa		13.75	□□□□□ -0.21
TAF1C-209	ENST00000564208	NEXN	Q0ZGT2	675 aa		13.75	□□□□□ -0.21
TAF1C-209	ENST00000564208	UNC5CL	Q8IV45	518 aa		13.75	□□□□□ -0.21
TAF1C-209	ENST00000564208	LARP6	Q9BRS8	491 aa	Known RBP	13.75	□□□□□ -0.21
TAF1C-209	ENST00000564208	DDX58	O95786	925 aa	Known RBP	13.74	□□□□□ -0.21
TAF1C-209	ENST00000564208	PHKG2	P15735	406 aa		13.74	□□□□□ -0.21
TAF1C-209	ENST00000564208	CHD2	O14647	1828 aa	Known RBP	13.74	□□□□□ -0.21
TAF1C-209	ENST00000564208	SOS1	Q07889	1333 aa	Predicted RBP	13.74	□□□□□ -0.21
TAF1C-209	ENST00000564208	BEND3	Q5T5X7	828 aa		13.74	□□□□□ -0.21
TAF1C-209	ENST00000564208	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.74	□□□□□ -0.21
TAF1C-209	ENST00000564208	KIF24	Q5T7B8	1368 aa		13.74	□□□□□ -0.21
TAF1C-209	ENST00000564208	ADAMTS2	O95450	1211 aa		13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	SLC52A2	Q9HAB3	445 aa		13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	FAM13B	Q9NYF5	915 aa		13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	UPF3B	Q9BZI7	483 aa	Known RBP	13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	ZBTB3	Q9H5J0	574 aa		13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	DDX49	Q9Y6V7	483 aa	Known RBP	13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	ZBTB22	O15209	634 aa		13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	LARP1	Q6PKG0	1096 aa	Known RBP	13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	RHPN1	Q8TCX5	695 aa		13.73	□□□□□ -0.21
TAF1C-209	ENST00000564208	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	NUTM2E	B1AL46	878 aa	Predicted RBP	13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	KSR2	Q6VAB6	950 aa		13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	ISY1	Q9ULR0	285 aa	Known RBP	13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	IFIT2	P09913	472 aa	Known RBP	13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	CWC27	Q6UX04	472 aa	Known RBP	13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	KIAA1211	Q6ZU35	1233 aa		13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	UBE3B	Q7Z3V4	1068 aa		13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	NASP	P49321	788 aa	Predicted RBP	13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	NEK4	P51957	841 aa		13.72	□□□□□ -0.21
TAF1C-209	ENST00000564208	LTN1	O94822	1766 aa		13.71	□□□□□ -0.21
TAF1C-209	ENST00000564208	ERC2	O15083	957 aa		13.71	□□□□□ -0.21
TAF1C-209	ENST00000564208	AACS	Q86V21	672 aa		13.71	□□□□□ -0.21
TAF1C-209	ENST00000564208	REC8	O95072	547 aa		13.71	□□□□□ -0.21
TAF1C-209	ENST00000564208	PDE4C	Q08493	712 aa		13.71	□□□□□ -0.21
TAF1C-209	ENST00000564208	CEMIP	Q8WUJ3	1361 aa		13.71	□□□□□ -0.21
TAF1C-209	ENST00000564208	PIP4K2B	P78356	416 aa		13.71	□□□□□ -0.22
TAF1C-209	ENST00000564208	RBM10	P98175	930 aa	Known RBP	13.71	□□□□□ -0.22
TAF1C-209	ENST00000564208	BICC1	Q9H694	974 aa	Known RBP	13.71	□□□□□ -0.22
TAF1C-209	ENST00000564208	SPATA31A3	Q5VYP0	1347 aa		13.71	□□□□□ -0.22
TAF1C-209	ENST00000564208	A1BG	P04217	495 aa		13.7	□□□□□ -0.22
TAF1C-209	ENST00000564208	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
TAF1C-209	ENST00000564208	CLASRP	Q8N2M8	674 aa	Known RBP	13.7	□□□□□ -0.22
TAF1C-209	ENST00000564208	ZCRB1	Q8TBF4	217 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms