RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.24□□□□□ -1.25
HERPUD1-207ENST00000563781 FMN2Q9NZ56 1722 aa7.24□□□□□ -1.25
HERPUD1-207ENST00000563781 USP32Q8NFA0 1604 aa7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 CCDC7Q96M83 1385 aa7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 TMF1P82094 1093 aa7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 KCNC4Q03721 635 aa7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 Q3C1V9 767 aa7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 PCMTD1Q96MG8 357 aaPredicted RBP7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 PUS7Q96PZ0 661 aaKnown RBP7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 KIF7Q2M1P5 1343 aa7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 WASHC2AQ641Q2 1341 aa7.23□□□□□ -1.25
HERPUD1-207ENST00000563781 ATAD2Q6PL18 1390 aa7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 LILRB3O75022 631 aa7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 FMNL1O95466 1100 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 PDIA4P13667 645 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 ATF3P18847 181 aa7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 SRPK2P78362 688 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 CSPP1Q1MSJ5 1256 aa7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 PRPF38BQ5VTL8 546 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 RNF19BQ6ZMZ0 732 aa7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 SYMPKQ92797 1274 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 NUDT16Q96DE0 195 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-207ENST00000563781 QPCTQ16769 361 aa7.21□□□□□ -1.26
HERPUD1-207ENST00000563781 ORAI2Q96SN7 254 aa7.21□□□□□ -1.26
HERPUD1-207ENST00000563781 ARID3AQ99856 593 aa7.21□□□□□ -1.26
HERPUD1-207ENST00000563781 SLAIN2Q9P270 581 aa7.21□□□□□ -1.26
HERPUD1-207ENST00000563781 TOPAZ1Q8N9V7 1692 aa7.21□□□□□ -1.26
HERPUD1-207ENST00000563781 PPIP5K1Q6PFW1 1433 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 CD163L1Q9NR16 1453 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 UBAP1LF5GYI3 381 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 C6orf229H3BNL8 230 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 MTMR2Q13614 643 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 CDCA8Q53HL2 280 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 BRINP3Q76B58 766 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 NKX2-3Q8TAU0 364 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 CABLES1Q8TDN4 633 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 SPSB2Q99619 263 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 ZBTB3Q9H5J0 574 aa7.2□□□□□ -1.26
HERPUD1-207ENST00000563781 SPDYE5A6NIY4 337 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 APBB1O00213 710 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 TLL1O43897 1013 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 TOM1O60784 492 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 ADH1BP00325 375 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 ESCO1Q5FWF5 840 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 IFFO2Q5TF58 517 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 PPP2R2DQ66LE6 453 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 RETREG3Q86VR2 466 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 FAM160A2Q8N612 972 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 USB1Q9BQ65 265 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 SLC12A5Q9H2X9 1139 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 CABP1Q9NZU7 370 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 POLR3AO14802 1390 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 NINLQ9Y2I6 1382 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 MYOM1P52179 1685 aa7.19□□□□□ -1.26
HERPUD1-207ENST00000563781 CPSF1Q10570 1443 aaKnown RBP7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 A6NJR5 290 aa7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 RTL5Q5HYW3 569 aaPredicted RBP7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 PMFBP1Q8TBY8 1022 aa7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 POLR3GLQ9BT43 218 aa7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 ACEP12821 1306 aa7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 A0A1W2PP64 1363 aa7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 ANKRD36BQ8N2N9 1353 aa7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 SSH2Q76I76 1423 aa7.18□□□□□ -1.26
HERPUD1-207ENST00000563781 NUTM2BA6NNL0 878 aaPredicted RBP7.17□□□□□ -1.26
HERPUD1-207ENST00000563781 NUTM2EB1AL46 878 aaPredicted RBP7.17□□□□□ -1.26
HERPUD1-207ENST00000563781 MSS51Q4VC12 460 aa7.17□□□□□ -1.26
HERPUD1-207ENST00000563781 NUTM2AQ8IVF1 878 aaPredicted RBP7.17□□□□□ -1.26
HERPUD1-207ENST00000563781 TMC1Q8TDI8 760 aa7.17□□□□□ -1.26
HERPUD1-207ENST00000563781 DDX17Q92841 729 aaKnown RBP7.17□□□□□ -1.26
HERPUD1-207ENST00000563781 PLA2G2EQ9NZK7 142 aa7.17□□□□□ -1.26
HERPUD1-207ENST00000563781 PXDNQ92626 1479 aa7.17□□□□□ -1.26
HERPUD1-207ENST00000563781 AHDC1Q5TGY3 1603 aaPredicted RBP7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 KIF1AQ12756 1690 aa7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 ROBO1Q9Y6N7 1651 aa7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 CFAP99D6REC4 459 aa7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 FOXO3O43524 673 aa7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 PIP4K2BP78356 416 aa7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 CARD14Q9BXL6 1004 aa7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 SOS2Q07890 1332 aaPredicted RBP7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 USP6P35125 1406 aa7.16□□□□□ -1.26
HERPUD1-207ENST00000563781 ITSN1Q15811 1721 aa7.15□□□□□ -1.26
HERPUD1-207ENST00000563781 RGPD8O14715 1765 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-207ENST00000563781 XPCQ01831 940 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-207ENST00000563781 HDGFL2Q7Z4V5 671 aaPredicted RBP7.15□□□□□ -1.26
HERPUD1-207ENST00000563781 NGDNQ8NEJ9 315 aaKnown RBP7.15□□□□□ -1.26
HERPUD1-207ENST00000563781 PRR7Q8TB68 274 aa7.15□□□□□ -1.26
HERPUD1-207ENST00000563781 PANK3Q9H999 370 aa7.15□□□□□ -1.26
HERPUD1-207ENST00000563781 NPHP3Q7Z494 1330 aa7.15□□□□□ -1.26
HERPUD1-207ENST00000563781 EDC4Q6P2E9 1401 aaKnown RBP7.15□□□□□ -1.27
HERPUD1-207ENST00000563781 NHSL1Q5SYE7 1610 aa7.15□□□□□ -1.27
HERPUD1-207ENST00000563781 SBNO1A3KN83 1393 aa7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 RFC5P40937 340 aa7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 DESI1Q6ICB0 168 aa7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 NRKQ7Z2Y5 1582 aa7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 KRT28Q7Z3Y7 464 aa7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 TTC21BQ7Z4L5 1316 aa7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 KTN1Q86UP2 1357 aaKnown RBP7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 NSD3Q9BZ95 1437 aa7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 SLC6A16Q9GZN6 736 aa7.14□□□□□ -1.27
HERPUD1-207ENST00000563781 TERF2IPQ9NYB0 399 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms