RNA–Protein interactions for RNA: ENST00000563767.1

FANCA-214, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-214ENST00000563767 CCDC27Q2M243 656 aa17.11■□□□□ 0.33
FANCA-214ENST00000563767 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
FANCA-214ENST00000563767 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
FANCA-214ENST00000563767 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
FANCA-214ENST00000563767 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
FANCA-214ENST00000563767 FMNL2Q96PY5 1086 aa17.1■□□□□ 0.33
FANCA-214ENST00000563767 CHL1O00533 1208 aa17.09■□□□□ 0.33
FANCA-214ENST00000563767 AMIGO3Q86WK7 504 aa17.09■□□□□ 0.33
FANCA-214ENST00000563767 WWC1Q8IX03 1113 aa17.09■□□□□ 0.33
FANCA-214ENST00000563767 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
FANCA-214ENST00000563767 BABAM1Q9NWV8 329 aa17.09■□□□□ 0.33
FANCA-214ENST00000563767 TSPYL4Q9UJ04 414 aa17.09■□□□□ 0.33
FANCA-214ENST00000563767 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
FANCA-214ENST00000563767 PNPLA7Q6ZV29 1317 aa17.08■□□□□ 0.32
FANCA-214ENST00000563767 CNTNAP4Q9C0A0 1308 aa17.08■□□□□ 0.32
FANCA-214ENST00000563767 PRAMEF22A3QJZ6 481 aa17.08■□□□□ 0.32
FANCA-214ENST00000563767 CYP19A1P11511 503 aaPredicted RBP17.08■□□□□ 0.32
FANCA-214ENST00000563767 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.32
FANCA-214ENST00000563767 RC3H1Q5TC82 1133 aaKnown RBP17.08■□□□□ 0.32
FANCA-214ENST00000563767 SMIM5Q71RC9 77 aa17.08■□□□□ 0.32
FANCA-214ENST00000563767 TFCP2L1Q9NZI6 479 aa17.08■□□□□ 0.32
FANCA-214ENST00000563767 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
FANCA-214ENST00000563767 ZNF853P0CG23 659 aa17.07■□□□□ 0.32
FANCA-214ENST00000563767 AK7Q96M32 723 aa17.07■□□□□ 0.32
FANCA-214ENST00000563767 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
FANCA-214ENST00000563767 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
FANCA-214ENST00000563767 INTS5Q6P9B9 1019 aaKnown RBP17.06■□□□□ 0.32
FANCA-214ENST00000563767 USP16Q9Y5T5 823 aa17.06■□□□□ 0.32
FANCA-214ENST00000563767 GNPATO15228 680 aa17.05■□□□□ 0.32
FANCA-214ENST00000563767 SNRPA1P09661 255 aaKnown RBP17.05■□□□□ 0.32
FANCA-214ENST00000563767 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
FANCA-214ENST00000563767 TEX13AQ9BXU3 409 aaPredicted RBP17.05■□□□□ 0.32
FANCA-214ENST00000563767 IFT57Q9NWB7 429 aa17.05■□□□□ 0.32
FANCA-214ENST00000563767 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
FANCA-214ENST00000563767 APLP1P51693 650 aa17.04■□□□□ 0.32
FANCA-214ENST00000563767 CALD1Q05682 793 aaKnown RBP17.04■□□□□ 0.32
FANCA-214ENST00000563767 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
FANCA-214ENST00000563767 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
FANCA-214ENST00000563767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.03■□□□□ 0.32
FANCA-214ENST00000563767 PHF14O94880 888 aa17.03■□□□□ 0.32
FANCA-214ENST00000563767 STARD3NLO95772 234 aa17.03■□□□□ 0.32
FANCA-214ENST00000563767 GNAI1P63096 354 aa17.03■□□□□ 0.32
FANCA-214ENST00000563767 NGEFQ8N5V2 710 aa17.03■□□□□ 0.32
FANCA-214ENST00000563767 CCDC87Q9NVE4 849 aa17.03■□□□□ 0.32
FANCA-214ENST00000563767 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
FANCA-214ENST00000563767 MSH5O43196 834 aa17.02■□□□□ 0.32
FANCA-214ENST00000563767 A1BGP04217 495 aa17.02■□□□□ 0.32
FANCA-214ENST00000563767 SSFA2P28290 1259 aa17.02■□□□□ 0.32
FANCA-214ENST00000563767 KRT24Q2M2I5 525 aa17.02■□□□□ 0.32
FANCA-214ENST00000563767 WDR63Q8IWG1 891 aa17.02■□□□□ 0.32
FANCA-214ENST00000563767 RTCBQ9Y3I0 505 aaKnown RBP17.02■□□□□ 0.32
FANCA-214ENST00000563767 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
FANCA-214ENST00000563767 CAPN15O75808 1086 aa17.01■□□□□ 0.31
FANCA-214ENST00000563767 FLAD1Q8NFF5 587 aa17.01■□□□□ 0.31
FANCA-214ENST00000563767 C4AP0C0L4 1744 aa17.01■□□□□ 0.31
FANCA-214ENST00000563767 SOS1Q07889 1333 aaPredicted RBP17■□□□□ 0.31
FANCA-214ENST00000563767 IL16Q14005 1332 aa17■□□□□ 0.31
FANCA-214ENST00000563767 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
FANCA-214ENST00000563767 ARHGEF1Q92888 912 aaKnown RBP17■□□□□ 0.31
FANCA-214ENST00000563767 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
FANCA-214ENST00000563767 COL24A1Q17RW2 1714 aa16.99■□□□□ 0.31
FANCA-214ENST00000563767 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
FANCA-214ENST00000563767 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
FANCA-214ENST00000563767 ADRA2BP18089 450 aa16.98■□□□□ 0.31
FANCA-214ENST00000563767 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
FANCA-214ENST00000563767 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
FANCA-214ENST00000563767 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
FANCA-214ENST00000563767 DNAJC5GQ8N7S2 189 aa16.98■□□□□ 0.31
FANCA-214ENST00000563767 TSR2Q969E8 191 aaKnown RBP16.98■□□□□ 0.31
FANCA-214ENST00000563767 EIF5P55010 431 aaKnown RBP16.97■□□□□ 0.31
FANCA-214ENST00000563767 CD2APQ9Y5K6 639 aa16.97■□□□□ 0.31
FANCA-214ENST00000563767 IL6STP40189 918 aaPredicted RBP16.96■□□□□ 0.31
FANCA-214ENST00000563767 DUSP27Q5VZP5 1158 aa16.96■□□□□ 0.31
FANCA-214ENST00000563767 C8orf58Q8NAV2 365 aa16.96■□□□□ 0.31
FANCA-214ENST00000563767 ADCY9O60503 1353 aa16.95■□□□□ 0.3
FANCA-214ENST00000563767 COL15A1P39059 1388 aa16.95■□□□□ 0.3
FANCA-214ENST00000563767 KIF3CO14782 793 aa16.95■□□□□ 0.3
FANCA-214ENST00000563767 EIF2S2P20042 333 aaKnown RBP16.95■□□□□ 0.3
FANCA-214ENST00000563767 RFC4P35249 363 aa16.95■□□□□ 0.3
FANCA-214ENST00000563767 COL13A1Q5TAT6 717 aaPredicted RBP16.95■□□□□ 0.3
FANCA-214ENST00000563767 SRP68Q9UHB9 627 aaKnown RBP16.95■□□□□ 0.3
FANCA-214ENST00000563767 ELL2O00472 640 aaPredicted RBP16.94■□□□□ 0.3
FANCA-214ENST00000563767 HOXB7P09629 217 aa16.94■□□□□ 0.3
FANCA-214ENST00000563767 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
FANCA-214ENST00000563767 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
FANCA-214ENST00000563767 FANCIQ9NVI1 1328 aa16.94■□□□□ 0.3
FANCA-214ENST00000563767 PDIA6Q15084 440 aa16.93■□□□□ 0.3
FANCA-214ENST00000563767 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
FANCA-214ENST00000563767 USP42Q9H9J4 1324 aaKnown RBP16.93■□□□□ 0.3
FANCA-214ENST00000563767 GYS1P13807 737 aa16.92■□□□□ 0.3
FANCA-214ENST00000563767 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
FANCA-214ENST00000563767 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
FANCA-214ENST00000563767 NARFQ9UHQ1 456 aa16.92■□□□□ 0.3
FANCA-214ENST00000563767 ZNF330Q9Y3S2 320 aaPredicted RBP16.92■□□□□ 0.3
FANCA-214ENST00000563767 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
FANCA-214ENST00000563767 A0A087WZG4 1122 aa16.91■□□□□ 0.3
FANCA-214ENST00000563767 TOMM70O94826 608 aa16.91■□□□□ 0.3
FANCA-214ENST00000563767 PRELPP51888 382 aa16.91■□□□□ 0.3
FANCA-214ENST00000563767 PROSER3Q2NL68 480 aa16.91■□□□□ 0.3
FANCA-214ENST00000563767 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms