RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 BACH2Q9BYV9 841 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 DDX21Q9NR30 783 aaKnown RBP eCLIP9.09□□□□□ -0.95
TCF4-216ENST00000562680 MAP3K2Q9Y2U5 619 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 DDX11L8A8MPP1 907 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 NBPF6Q5VWK0 638 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 NBPF4Q96M43 638 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 MAP7D2Q96T17 732 aa9.09□□□□□ -0.95
TCF4-216ENST00000562680 IQGAP1P46940 1657 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 TMEM131LA2VDJ0 1609 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 RALYLQ86SE5 291 aaKnown RBP9.08□□□□□ -0.96
TCF4-216ENST00000562680 AACSQ86V21 672 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 ERVV-2B6SEH9 535 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 F6X3S4 739 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 WASHC4Q2M389 1173 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 ERBB4Q15303 1308 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 PPP1R42Q7Z4L9 355 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 LRRFIP2Q9Y608 721 aaKnown RBP9.08□□□□□ -0.96
TCF4-216ENST00000562680 ANKRD44Q8N8A2 993 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 ADGRB1O14514 1584 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 IFIT5Q13325 482 aaKnown RBP9.08□□□□□ -0.96
TCF4-216ENST00000562680 C8orf37Q96NL8 207 aa9.08□□□□□ -0.96
TCF4-216ENST00000562680 ISY1Q9ULR0 285 aaKnown RBP9.08□□□□□ -0.96
TCF4-216ENST00000562680 MX1P20591 662 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 NUCB2P80303 420 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 AKAP17AQ02040 695 aaKnown RBP9.07□□□□□ -0.96
TCF4-216ENST00000562680 FAM184AQ8NB25 1140 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 CHMP5Q9NZZ3 219 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 CPSF1Q10570 1443 aaKnown RBP9.07□□□□□ -0.96
TCF4-216ENST00000562680 CALRP27797 417 aaKnown RBP9.07□□□□□ -0.96
TCF4-216ENST00000562680 SPRYD3Q8NCJ5 442 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 SLC52A2Q9HAB3 445 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 GOLGA6L6A8MZA4 724 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 ZNF790Q6PG37 636 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 NFATC2IPQ8NCF5 419 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 CARD10Q9BWT7 1032 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 TRMT112Q9UI30 125 aaKnown RBP9.07□□□□□ -0.96
TCF4-216ENST00000562680 RIMS1Q86UR5 1692 aaKnown RBP9.07□□□□□ -0.96
TCF4-216ENST00000562680 RNF123Q5XPI4 1314 aa9.07□□□□□ -0.96
TCF4-216ENST00000562680 ERICH2A1L162 156 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 FAM177BA6PVY3 158 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 XAGE3Q8WTP9 111 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 PPLO60437 1756 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 SPATA31A3Q5VYP0 1347 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 ANKRD18BA2A2Z9 1011 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 IFIT1P09914 478 aaKnown RBP9.06□□□□□ -0.96
TCF4-216ENST00000562680 EXOC6BQ9Y2D4 811 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 NRDCO43847 1150 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 PLEKHF1Q96S99 279 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 FER1L4A9Z1Z3 1794 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 SKOR2Q2VWA4 1001 aaPredicted RBP9.06□□□□□ -0.96
TCF4-216ENST00000562680 DNAJC2Q99543 621 aaKnown RBP9.06□□□□□ -0.96
TCF4-216ENST00000562680 SIL1Q9H173 461 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 CTNNA3Q9UI47 895 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 GRM8O00222 908 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 SLC3A2P08195 630 aaKnown RBP9.06□□□□□ -0.96
TCF4-216ENST00000562680 GSE1Q14687 1217 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 COPS6Q7L5N1 327 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 AK7Q96M32 723 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 CDC5LQ99459 802 aaKnown RBP9.06□□□□□ -0.96
TCF4-216ENST00000562680 TRIM34Q9BYJ4 488 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 NACAP1Q9BZK3 213 aa9.06□□□□□ -0.96
TCF4-216ENST00000562680 ZNF335Q9H4Z2 1342 aaPredicted RBP9.05□□□□□ -0.96
TCF4-216ENST00000562680 KRT32Q14532 448 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 SLIT1O75093 1534 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 CPLX1O14810 134 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 SART3Q15020 963 aaKnown RBP9.05□□□□□ -0.96
TCF4-216ENST00000562680 BMP2KLQ5H9B9 411 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 METTL24Q5JXM2 366 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 WDR17Q8IZU2 1322 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 PHF14O94880 888 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 NCAPD2Q15021 1401 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 ERBB3P21860 1342 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 H3BQV1 296 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 ATP8B2P98198 1209 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 TAF3Q5VWG9 929 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 ZBTB3Q9H5J0 574 aa9.05□□□□□ -0.96
TCF4-216ENST00000562680 TNS3Q68CZ2 1445 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 PTPRUQ92729 1446 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 SLC39A6Q13433 755 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 ANKRD1Q15327 319 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 TSPYL6Q8N831 410 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 BRINP3Q76B58 766 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 ZNF521Q96K83 1311 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 PNPLA6Q8IY17 1366 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 POLR1AO95602 1720 aaPredicted RBP9.04□□□□□ -0.96
TCF4-216ENST00000562680 ARHGAP23Q9P227 1491 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 IL1RAPL2Q9NP60 686 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.04□□□□□ -0.96
TCF4-216ENST00000562680 TRMT2AQ8IZ69 625 aaKnown RBP9.04□□□□□ -0.96
TCF4-216ENST00000562680 ECHDC1Q9NTX5 307 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 DCCP43146 1447 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 PHKG2P15735 406 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 TRIM29Q14134 588 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 UBE3BQ7Z3V4 1068 aa9.04□□□□□ -0.96
TCF4-216ENST00000562680 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
TCF4-216ENST00000562680 ZBTB40Q9NUA8 1239 aa9.03□□□□□ -0.96
TCF4-216ENST00000562680 C1orf167Q5SNV9 1468 aa9.03□□□□□ -0.96
TCF4-216ENST00000562680 PDCP20941 246 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms