RNA–Protein interactions for RNA: ENST00000562515.2

AC055876.4-201, humanhuman

BASIC

Gene AC055876.4, Length 712 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.4-201ENST00000562515 CACNA1SQ13698 1873 aa12.92□□□□□ -0.34
AC055876.4-201ENST00000562515 CCDC88AQ3V6T2 1871 aa12.92□□□□□ -0.34
AC055876.4-201ENST00000562515 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
AC055876.4-201ENST00000562515 NMRK2Q9NPI5 230 aa12.92□□□□□ -0.34
AC055876.4-201ENST00000562515 SCN7AQ01118 1682 aa12.92□□□□□ -0.34
AC055876.4-201ENST00000562515 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
AC055876.4-201ENST00000562515 CHRNA5P30532 468 aa12.91□□□□□ -0.34
AC055876.4-201ENST00000562515 SLC39A6Q13433 755 aa12.91□□□□□ -0.34
AC055876.4-201ENST00000562515 TTC5Q8N0Z6 440 aa12.91□□□□□ -0.34
AC055876.4-201ENST00000562515 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
AC055876.4-201ENST00000562515 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
AC055876.4-201ENST00000562515 RNMTO43148 476 aaKnown RBP12.9□□□□□ -0.34
AC055876.4-201ENST00000562515 CNGB1Q14028 1251 aaPredicted RBP12.9□□□□□ -0.34
AC055876.4-201ENST00000562515 CC2D1BQ5T0F9 858 aaKnown RBP12.9□□□□□ -0.34
AC055876.4-201ENST00000562515 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
AC055876.4-201ENST00000562515 INTS5Q6P9B9 1019 aaKnown RBP12.89□□□□□ -0.35
AC055876.4-201ENST00000562515 LGR6Q9HBX8 967 aa12.89□□□□□ -0.35
AC055876.4-201ENST00000562515 ZBTB1Q9Y2K1 713 aa12.89□□□□□ -0.35
AC055876.4-201ENST00000562515 ZNF330Q9Y3S2 320 aaPredicted RBP12.89□□□□□ -0.35
AC055876.4-201ENST00000562515 SIPA1L3O60292 1781 aaPredicted RBP12.89□□□□□ -0.35
AC055876.4-201ENST00000562515 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
AC055876.4-201ENST00000562515 KCNA3P22001 575 aa12.88□□□□□ -0.35
AC055876.4-201ENST00000562515 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
AC055876.4-201ENST00000562515 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
AC055876.4-201ENST00000562515 NARFQ9UHQ1 456 aa12.88□□□□□ -0.35
AC055876.4-201ENST00000562515 U2SURPO15042 1029 aaKnown RBP12.87□□□□□ -0.35
AC055876.4-201ENST00000562515 NPHP1O15259 732 aa12.87□□□□□ -0.35
AC055876.4-201ENST00000562515 CYP19A1P11511 503 aaPredicted RBP12.87□□□□□ -0.35
AC055876.4-201ENST00000562515 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
AC055876.4-201ENST00000562515 RASSF7Q02833 373 aa12.87□□□□□ -0.35
AC055876.4-201ENST00000562515 TEFQ10587 303 aa12.87□□□□□ -0.35
AC055876.4-201ENST00000562515 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
AC055876.4-201ENST00000562515 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
AC055876.4-201ENST00000562515 BCORQ6W2J9 1755 aa12.86□□□□□ -0.35
AC055876.4-201ENST00000562515 COL11A2P13942 1736 aaPredicted RBP12.86□□□□□ -0.35
AC055876.4-201ENST00000562515 NFIXQ14938 502 aa12.86□□□□□ -0.35
AC055876.4-201ENST00000562515 BICDL1Q6ZP65 573 aa12.86□□□□□ -0.35
AC055876.4-201ENST00000562515 ANKRD31Q8N7Z5 1873 aa12.86□□□□□ -0.35
AC055876.4-201ENST00000562515 STARD3NLO95772 234 aa12.85□□□□□ -0.35
AC055876.4-201ENST00000562515 SERPINB2P05120 415 aa12.85□□□□□ -0.35
AC055876.4-201ENST00000562515 TM4SF1P30408 202 aa12.85□□□□□ -0.35
AC055876.4-201ENST00000562515 C2CD5Q86YS7 1000 aa12.85□□□□□ -0.35
AC055876.4-201ENST00000562515 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
AC055876.4-201ENST00000562515 ZC3H4Q9UPT8 1303 aaKnown RBP12.85□□□□□ -0.35
AC055876.4-201ENST00000562515 A0A087WZG4 1122 aa12.84□□□□□ -0.35
AC055876.4-201ENST00000562515 FSTL1Q12841 308 aa12.84□□□□□ -0.35
AC055876.4-201ENST00000562515 GAS2L2Q8NHY3 880 aa12.84□□□□□ -0.35
AC055876.4-201ENST00000562515 RRAGCQ9HB90 399 aa12.84□□□□□ -0.35
AC055876.4-201ENST00000562515 COL3A1P02461 1466 aaPredicted RBP12.84□□□□□ -0.35
AC055876.4-201ENST00000562515 DICER1Q9UPY3 1922 aaKnown RBP12.84□□□□□ -0.35
AC055876.4-201ENST00000562515 CARMIL3Q8ND23 1372 aa12.83□□□□□ -0.36
AC055876.4-201ENST00000562515 H0YIN7 160 aa12.83□□□□□ -0.36
AC055876.4-201ENST00000562515 TTLL6Q8N841 843 aa12.83□□□□□ -0.36
AC055876.4-201ENST00000562515 ARFGEF2Q9Y6D5 1785 aa12.83□□□□□ -0.36
AC055876.4-201ENST00000562515 HEG1Q9ULI3 1381 aa12.82□□□□□ -0.36
AC055876.4-201ENST00000562515 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
AC055876.4-201ENST00000562515 LMNB1P20700 586 aa12.82□□□□□ -0.36
AC055876.4-201ENST00000562515 SMC1BQ8NDV3 1235 aa12.82□□□□□ -0.36
AC055876.4-201ENST00000562515 ZNF622Q969S3 477 aaKnown RBP eCLIP12.82□□□□□ -0.36
AC055876.4-201ENST00000562515 FER1L6Q2WGJ9 1857 aa12.81□□□□□ -0.36
AC055876.4-201ENST00000562515 HTRA3P83110 453 aa12.81□□□□□ -0.36
AC055876.4-201ENST00000562515 CFAP53Q96M91 514 aa12.81□□□□□ -0.36
AC055876.4-201ENST00000562515 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
AC055876.4-201ENST00000562515 ZNF790Q6PG37 636 aa12.8□□□□□ -0.36
AC055876.4-201ENST00000562515 KLRG1Q96E93 195 aa12.8□□□□□ -0.36
AC055876.4-201ENST00000562515 FMNL2Q96PY5 1086 aa12.8□□□□□ -0.36
AC055876.4-201ENST00000562515 TEX13AQ9BXU3 409 aaPredicted RBP12.8□□□□□ -0.36
AC055876.4-201ENST00000562515 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
AC055876.4-201ENST00000562515 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
AC055876.4-201ENST00000562515 PDE6BP35913 854 aa12.79□□□□□ -0.36
AC055876.4-201ENST00000562515 ST5P78524 1137 aa12.79□□□□□ -0.36
AC055876.4-201ENST00000562515 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
AC055876.4-201ENST00000562515 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
AC055876.4-201ENST00000562515 PDZRN3Q9UPQ7 1066 aa12.79□□□□□ -0.36
AC055876.4-201ENST00000562515 TBC1D2BQ9UPU7 963 aa12.79□□□□□ -0.36
AC055876.4-201ENST00000562515 GLTPD2A6NH11 291 aa12.78□□□□□ -0.36
AC055876.4-201ENST00000562515 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
AC055876.4-201ENST00000562515 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
AC055876.4-201ENST00000562515 CNBD1Q8NA66 436 aa12.78□□□□□ -0.36
AC055876.4-201ENST00000562515 NPC1L1Q9UHC9 1359 aa12.78□□□□□ -0.36
AC055876.4-201ENST00000562515 BTBD11A6QL63 1104 aa12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 C21orf2O43822 256 aa12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 PRKAR2BP31323 418 aa12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 DNAJC5GQ8N7S2 189 aa12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 RTF1Q92541 710 aaKnown RBP12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 SETDB2Q96T68 719 aa12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 NUDCQ9Y266 331 aa12.77□□□□□ -0.37
AC055876.4-201ENST00000562515 NFKBIEO00221 500 aa12.76□□□□□ -0.37
AC055876.4-201ENST00000562515 PER1O15534 1290 aaPredicted RBP12.76□□□□□ -0.37
AC055876.4-201ENST00000562515 ERFEQ4G0M1 354 aa12.76□□□□□ -0.37
AC055876.4-201ENST00000562515 PRR5LQ6MZQ0 368 aa12.76□□□□□ -0.37
AC055876.4-201ENST00000562515 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
AC055876.4-201ENST00000562515 BRIP1Q9BX63 1249 aa12.76□□□□□ -0.37
AC055876.4-201ENST00000562515 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
AC055876.4-201ENST00000562515 SLX4Q8IY92 1834 aa12.76□□□□□ -0.37
AC055876.4-201ENST00000562515 A1BGP04217 495 aa12.75□□□□□ -0.37
AC055876.4-201ENST00000562515 IL17REQ8NFR9 667 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms